prot_P-fluviatile_contig56.11980.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.11980.1
Unique Nameprot_P-fluviatile_contig56.11980.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length328
Homology
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.980e-74
Identity = 143/218 (65.60%), Postives = 164/218 (75.23%), Query Frame = 0
Query:  119 GSKLRQSPGTVAIGGGRVAAGPRMAVWGAGXXXXX--RGLGQASSSQPTGRQG------GRGS-SRGLHDSGSPDYPRPPSLEEIPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGRSKLSSQDFD 327
            G+K R S G      G  AA P    WG G       RG GQAS               GRG+ +RGLHD   P  PRP S  E+PEDQLQ S+ RASGAGGQNVNKVSTKV++RFVV+EAEWLP+DVRLRLARQEKGR+NN+GELV+TAQEFRTQK+NRSQAL KLR+MI+E WEPAKERKMRTGIS+KGK +R+Q+KLHRSKVKAGRSKLSS+D+D
Sbjct:   38 GAKRRLSSGPE----GGPAASPGTVPWGTGAAEGVGGRGRGQASXXXXXXXXXXXXXXXGRGTIARGLHDR-RPYTPRPKSFGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSKVKAGRSKLSSRDYD 250          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 133 bits (335), Expect = 6.900e-34
Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 0
Query:  189 PSLEEIPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGRSKL 321
            P   +IPE+ L +S+VR+SGAGGQNVNKV+++V +R  V EA W+P++VR RL +Q+  RI+  G L I AQE RTQ  NR  A+QKLRDM+ + W   KER++R GIS K KE R++ K  RS VKAGR K+
Sbjct:   94 PEYIDIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVKAGRKKV 226          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO)

HSP 1 Score: 131 bits (329), Expect = 5.130e-33
Identity = 73/144 (50.69%), Postives = 100/144 (69.44%), Query Frame = 0
Query:  178 HDSGSPDYPRPPSLEEIPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGRSKL 321
            +D+ + D  + P   +IPE+ L +S+VR+SGAGGQNVNKV+++V VR  V EA W+P++VR RL +Q+  RI+  G L I AQE RTQ  NR  A+QKL++M+ + W   KER+MR GIS K KE R++ K  RS VK GR K+
Sbjct:   82 NDNSNHDNWKVPEYIDIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRSDVKEGRKKV 225          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 129 bits (324), Expect = 5.680e-32
Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 0
Query:  194 IPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGRSKL 321
            IPEDQ+Q S+ RASGAGGQNVNKV+TKV++RF +  A W+P +VR RL   E GRINN G   IT QE RTQ +NR +A++KL+D++   W+  K RK+R G+++K KE RR+ K   S+ K  R ++
Sbjct:  126 IPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENKKKISQKKENRRRV 253          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 123 bits (308), Expect = 4.380e-31
Identity = 67/125 (53.60%), Postives = 86/125 (68.80%), Query Frame = 0
Query:  194 IPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGR 318
            IPEDQ+Q S+ R+SGAGGQNVNKV TKV++RF +  A W+P +VR RL   E  RINN G + + +QE+RTQ +NR  AL+KL D++   W   K RKMR G+S K KE RR+ K   S+ KA R
Sbjct:    3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMKKKISQKKANR 127          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: K0R9L2_THAOC (RF_PROK_I domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9L2_THAOC)

HSP 1 Score: 121 bits (303), Expect = 6.710e-29
Identity = 65/128 (50.78%), Postives = 87/128 (67.97%), Query Frame = 0
Query:  194 IPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGRSKL 321
            IPE++LQ ++ RASGAGGQNVNKV+TKV++RF +  AEW+P +VR RL   E  RINN G + IT+QE RTQ +NR  A++KL+D++   W   K RK R G +RK KE R + K   S  K  R ++
Sbjct:  127 IPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEANRINNEGYMSITSQEHRTQMQNRKDAMKKLQDIVRNSWARPKVRKTRKGPTRKAKEKRLENKKKNSLKKQSRGRV 254          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: A0A8J9S3S9_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3S9_PHATR)

HSP 1 Score: 114 bits (286), Expect = 7.610e-28
Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 0
Query:  194 IPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGR 318
            +PE QL++S++R+ GAGGQNVNKV+T V ++  +    W+P +VR RL +Q++ R++    LV+   E RTQ  NR  A+ KLR+MI + WE  KER +RTGIS K KE R+  K  RS VK GR
Sbjct:    3 VPESQLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSKEQYLVMQVSEHRTQSANRKTAVDKLRNMIRQAWERPKERSIRTGISVKTKEQRKDFKRKRSLVKQGR 127          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: A0A7S2BJ82_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BJ82_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.140e-27
Identity = 60/126 (47.62%), Postives = 88/126 (69.84%), Query Frame = 0
Query:  193 EIPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGR 318
            ++PE++L +++  + G GGQNVNKV+T+   RF V  A+WLP +VR RL  Q++GR+N + EL++++QE RTQ++NR + L KL+ ++ E     KER + T IS+KGK  RR  K HRSKVK  R
Sbjct:   75 DVPENRLVFTFTPSQGPGGQNVNKVNTRAVARFHVPSADWLPVEVRGRLVEQQRGRMNQKDELIVSSQEHRTQRRNRVECLLKLKLLVAEAAVEPKERNLYTDISKKGKGQRRDAKRHRSKVKENR 200          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: W7T6I3_9STRA (Peptidyl-trna hydrolase mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6I3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 7.150e-27
Identity = 61/133 (45.86%), Postives = 89/133 (66.92%), Query Frame = 0
Query:  193 EIPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGRSKLSSQD 325
            EIP D+L +SY R+SG GGQNVNK++T+V++RF V +A+W+P D+R R   Q++ R+N  GE V+++QE RTQ KNR + ++KL + +       K R MRTG++   KE R +EK  RS+ KA R +    D
Sbjct:   81 EIPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKKASRRRNGKWD 213          
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Match: A0A6U3Q7S5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q7S5_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.990e-26
Identity = 60/133 (45.11%), Postives = 86/133 (64.66%), Query Frame = 0
Query:  189 PSLEEIPEDQLQWSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRINNRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKGKEMRRQEKLHRSKVKAGRSKL 321
            P    IP DQL++S+VR+SGAGGQNVNK+STKV++RF V+ A W+P +VR RL+ Q   R+N  G + + +QEFRTQ  N+   + KL D++   +   K RKMR G+S+  K    ++K  RS  K  R ++
Sbjct:  170 PKTLSIPLDQLEFSFVRSSGAGGQNVNKLSTKVELRFHVSSANWIPFEVRQRLSSQNANRMNKEGYMTLNSQEFRTQAMNKKDVVNKLEDLVLLAYPRPKVRKMRKGVSQAAKRRNLEDKKRRSSTKQNRKRV 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.11980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI1.980e-7465.60RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A1Z5KFY9_FISSO6.900e-3454.14Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A1Z5KKA6_FISSO5.130e-3350.69Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A7S2PK85_9STRA5.680e-3252.34Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C3Q8_THAPS4.380e-3153.60RF_PROK_I domain-containing protein (Fragment) n=1... [more]
K0R9L2_THAOC6.710e-2950.78RF_PROK_I domain-containing protein n=2 Tax=Thalas... [more]
A0A8J9S3S9_PHATR7.610e-2848.80Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S2BJ82_9STRA3.140e-2747.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7T6I3_9STRA7.150e-2745.86Peptidyl-trna hydrolase mitochondrial-like protein... [more]
A0A6U3Q7S5_9STRA1.990e-2645.11Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 190..325
e-value: 1.3E-39
score: 137.1
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 192..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..327
NoneNo IPR availableSUPERFAMILY110916Peptidyl-tRNA hydrolase domain-likecoord: 181..286
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 193..318
e-value: 1.6E-22
score: 79.6
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 205..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:265897..269019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.11980.1mRNA_P-fluviatile_contig56.11980.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 265842..269941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.11980.1 ID=prot_P-fluviatile_contig56.11980.1|Name=mRNA_P-fluviatile_contig56.11980.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=328bp
MRSGSERSIMTLLLASRRGLPLLTFLPRRCAIPAFPNSPALSAALPSRIF
DNNRAKSRATERCGAVQLIAAPLSMTVARPGPSGEPAGGGRNCSNQRSER
NAQHGPPSATHPATSSPGGSKLRQSPGTVAIGGGRVAAGPRMAVWGAGAG
AGGRGLGQASSSQPTGRQGGRGSSRGLHDSGSPDYPRPPSLEEIPEDQLQ
WSYVRASGAGGQNVNKVSTKVDVRFVVAEAEWLPHDVRLRLARQEKGRIN
NRGELVITAQEFRTQKKNRSQALQKLRDMIHECWEPAKERKMRTGISRKG
KEMRRQEKLHRSKVKAGRSKLSSQDFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I