prot_P-fluviatile_contig56.11970.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.11970.1
Unique Nameprot_P-fluviatile_contig56.11970.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length103
Homology
BLAST of mRNA_P-fluviatile_contig56.11970.1 vs. uniprot
Match: D8LC02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC02_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.340e-55
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0
Query:    1 MVDQNVIYGGLVAFAGLAVGAGMVALTEQAGVRSEERGLLSTERKMKMQAMFMEDDVVETTNVDDVRYNMRKALRANQTEEELMALTADARKRAEEEADDGW 102
            MV+Q++IYGGLVA AGLAVGAGMVALTEQAGVRSEERG LS ERKMKMQAMFMEDDVVE T+VDDVRYNMRKALRANQTEEEL+ALTADARKRAEEEADDGW
Sbjct:    1 MVEQDIIYGGLVAVAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 102          
BLAST of mRNA_P-fluviatile_contig56.11970.1 vs. uniprot
Match: A0A836CFV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.890e-13
Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = 0
Query:    2 VDQNVIYGGLVAFAGLAVGAGMVALTEQAGVRSEERGLLSTERKMKMQAMFMEDDVVETTNVDDVRYNMRKALRANQTEEELMALTA-DARKRAEEEADDGW 102
            +DQN I G      GLA+G G+VA TEQ GV++ ERG+       K+QA  +ED  +E  +V  V   MR AL+ ++TEEEL  L A     R++E  DDGW
Sbjct:   58 MDQNTIIGIAAGVGGLALGIGLVAFTEQQGVKTAERGI-DEGMANKLQAKLLEDFELEENDVTSVTDRMRAALKQDKTEEELAELAAKQLAARSKEREDDGW 158          
BLAST of mRNA_P-fluviatile_contig56.11970.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.020e-9
Identity = 42/104 (40.38%), Postives = 55/104 (52.88%), Query Frame = 0
Query:    1 MVDQNVIYGGLVAFAGLAVGAGMVALTEQAGVRSEERG--LLSTERKMKMQAMFMEDDVVETTNVDDVRYNMRKALRANQTEEELMALTADARKRAEEEADDGW 102
            M+D  VI GG  A  GLAVG GM   +EQ   + E+RG   +S   + KM AMFMED+V+  T +DD    M  AL A + E    A+     ++     DDGW
Sbjct:   54 MLDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLPDTTLDDTVSRMEAALAAAKGE---AAVEEKVEEKPASSIDDGW 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.11970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC02_ECTSI2.340e-5591.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFV7_9STRA5.890e-1344.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4ECZ2_9STRA1.020e-940.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:140574..141856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.11970.1mRNA_P-fluviatile_contig56.11970.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 140574..141856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.11970.1 ID=prot_P-fluviatile_contig56.11970.1|Name=mRNA_P-fluviatile_contig56.11970.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=103bp
MVDQNVIYGGLVAFAGLAVGAGMVALTEQAGVRSEERGLLSTERKMKMQA
MFMEDDVVETTNVDDVRYNMRKALRANQTEEELMALTADARKRAEEEADD
GW*
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