prot_P-fluviatile_contig54.11769.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig54.11769.1
Unique Nameprot_P-fluviatile_contig54.11769.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length205
Homology
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BLAST of mRNA_P-fluviatile_contig54.11769.1 vs. uniprot
Match: A0A6H5KYI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI3_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 5.810e-41
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0 
Query:  113 AVAAELGDLDGGKPTPAGSISVTEGEPLSEEAARIQRKLAAQAKLNGKISSGQMTYMESRAAEEEKQQRMKDERNDKAKRRAAMCENLGRGC 204
            AVA +LGDLDGG PTP G + +TEGEPLSEEAARIQRKLAAQAKLNGK SSGQMTY ESRAAE EKQQR+KDE NDKA+RRAAMCENLGRGC
Sbjct:   88 AVADQLGDLDGGAPTPMGGVKLTEGEPLSEEAARIQRKLAAQAKLNGKSSSGQMTYGESRAAEGEKQQRLKDEANDKARRRAAMCENLGRGC 179
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BLAST of mRNA_P-fluviatile_contig54.11769.1 vs. uniprot
Match: D7FUR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR4_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.530e-33
Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 0 
Query:  130 GSISVTEGEPLSEEAARIQRKLAAQAKLNGKISSGQMTYMESRAAEEEKQQRMKDERNDKAKRRAAMCENLGRGC 204
            G++ +TEGEPLSEEAARIQRKLAAQAKLNGK SSGQMTY ESRAAE EKQQR+KDE NDKA+RRAAMCENLGRGC
Sbjct:    2 GAVKLTEGEPLSEEAARIQRKLAAQAKLNGKTSSGQMTYGESRAAEGEKQQRLKDEANDKARRRAAMCENLGRGC 76
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig54.11769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYI3_9PHAE5.810e-4184.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUR4_ECTSI1.530e-3386.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..204
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..39
score: 0.616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig54contigP-fluviatile_contig54:207119..212875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig54.11769.1mRNA_P-fluviatile_contig54.11769.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig54 203554..213402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig54.11769.1 ID=prot_P-fluviatile_contig54.11769.1|Name=mRNA_P-fluviatile_contig54.11769.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=205bp
MSAPGSHRTPPRHTAIAQSMKSFSTISALLLCVVLPCDAFIGATPRCSRS
LAAASTATTNSNMIMSAQEQPSSRSKILSRAASAVAVIGAGLGVSTGGGA
GSAFGPAAMAAPAVAAELGDLDGGKPTPAGSISVTEGEPLSEEAARIQRK
LAAQAKLNGKISSGQMTYMESRAAEEEKQQRMKDERNDKAKRRAAMCENL
GRGC*
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