mRNA_P-fluviatile_contig11.1085.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1085.1
Unique NamemRNA_P-fluviatile_contig11.1085.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: D7FXX0_ECTSI (CDAN1-interacting nuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX0_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 2.100e-162
Identity = 236/273 (86.45%), Postives = 258/273 (94.51%), Query Frame = 2 
Query:  500 MLKSDYNRAVALCKASIDGGFDLTTADTRAEGLPFDALQSLRRQMFSRHIRKVDWRCKQRTEEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVGAFEQGASVANLMRTPSLIADDRLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRPSNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFDSYEKDIMVAADFPSPIMLPDGRIM 1318
            MLK+DY+RAVALCKASIDGGFDLTT+ T  E LP+DALQSLRRQMFSRHIRKVDWRCKQRT+EFL QYRKG RIIDIARQPGLRYSPYLMARILVGA E GA++A LMRTPSLI D+RLRREVE+CIS+DRDYSP+LDRVRRG+GAEYE++LQQKLRARGVAFESESDLR+KGAYKTPDMLLQ PMAVK P NEW++VSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFG+VETLVSPEFD Y+KDIMV ADFPSPIMLPDG+++
Sbjct:    1 MLKADYHRAVALCKASIDGGFDLTTSHTSVESLPYDALQSLRRQMFSRHIRKVDWRCKQRTKEFLTQYRKGSRIIDIARQPGLRYSPYLMARILVGALEPGAAIAQLMRTPSLILDERLRREVEECISDDRDYSPHLDRVRRGVGAEYEFVLQQKLRARGVAFESESDLRQKGAYKTPDMLLQTPMAVKGPRNEWVIVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGYVETLVSPEFDGYKKDIMVKADFPSPIMLPDGQVL 273
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: A0A7S2SDJ1_9STRA (CDAN1-interacting nuclease 1 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDJ1_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.780e-51
Identity = 111/268 (41.42%), Postives = 162/268 (60.45%), Query Frame = 2 
Query:  521 RAVALCKASIDGGFDLTTADTRAEGLPFDALQSLRRQMFSRHIRKVDWRCKQRTEEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVG--AFEQGASVANLMRTPSLIADDRLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRPS-NEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFDSYEKDIMVAADFPSPIMLPDGRI 1315
            R  A C+ SI  G  +      +  +  +A+ SLRRQ+ +R IR    R +  + E L +++KG+ +I IA+    R+ P+L+AR +V       G  + +L+R P  I D RLRREV++    D D +P  D +R  +G EYE++LQ++L A GV +++E DL+ +G  KTPD  L+ P+AV+ P   EW  V WIDSKAMFGD  T+ +EH  QL SYV+R+GPGLV+YWFGF E L  P  D+    I ++ D P  ++LP G +
Sbjct:   11 RVRAACERSIQAGDPIDWRTLVSPDIDIEAILSLRRQIHTRWIRANTPRVRGASAEILRRWQKGEHVISIAK--AFRHPPFLLARGVVERVCHVTGKRIGDLVRHPERITDPRLRREVQEAAEADPDCAPRSDAIREVIGREYEFVLQRRLEALGVPYQTEEDLKTQGHSKTPDAWLRAPVAVQDPRVGEWRQVCWIDSKAMFGDVETFGKEHSMQLESYVHRFGPGLVVYWFGFDEEL--PRLDN----ICISTDVPIQMVLPGGDV 270
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: W7TNV0_9STRA (CDAN1-interacting nuclease 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNV0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.650e-46
Identity = 109/251 (43.43%), Postives = 149/251 (59.36%), Query Frame = 2 
Query:  566 LTTADTRAEG--LPFDALQSLRRQMFSRHIRKVDWRCKQRTEEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVGAFEQGAS---VANLMRTPSLIADDRLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRPSNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGF---VETLVSPEFDSYEKDIMVAADFPSPI 1294
            L  A+ R E   +  DAL S+R Q   RH++ V    ++    +  QY  G  I +IAR+  L Y PYL+AR+LV    +  +   V  LMR P LIA+ RLRREV  CI+ DRD+SP  DRV R +G +YE  LQ +LRA  + FE E+ LR +G  KTPD+ L VP+ V     +  VV+WIDSKA++G   T+  E   Q+  YVNR+GPG V++WFGF   V+ L+S +    E  ++V  DFP P+
Sbjct:    3 LPRAEERPESQDVSLDALLSIRHQRLVRHVKAVSGDHRRHVLAYCRQYEAGQSIHEIARR--LCYPPYLLARMLVEVLCKVGTRTKVTELMRAPHLIANHRLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQ----ECHVVVIDDFPPPV 247
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: A0A4D9D1V9_9STRA (CDAN1-interacting nuclease 1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V9_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.050e-45
Identity = 105/242 (43.39%), Postives = 145/242 (59.92%), Query Frame = 2 
Query:  587 AEGLPFDALQSLRRQMFSRHIRKVDWRCKQRTEEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVGAF---EQGASVANLMRTPSLIADDRLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRPSNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGF---VETLVSPEFDSYEKDIMVAADFPSPI 1294
            ++ +  DAL S+R Q   RH++ V    ++    +  QY  G+ I +IAR+  + Y PYL+AR+LV      E    V  LMR P LIA+ RLRREV  CI+ D D+SP  DRV R +G +YE  LQ +LRA  V FE E+ LR +G  KTPD+ L VP+ V     +  VV+WIDSKA++G   T+  E   Q+  YVNR+GPG V++WFGF   V+ L+S +    E  ++V  DFP P+
Sbjct:   83 SQDVSLDALLSIRHQRLVRHVKAVSGDHRRHVLAYCRQYEAGESIHEIARR--VCYPPYLLARMLVEVLCKVETRTKVTELMRAPHLIANHRLRREVMHCIAVDIDFSPGADRVSRSIGLDYERELQLRLRALAVPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSAQ----ECHVVVIDDFPPPV 318
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: A0A2P4XRT8_9STRA (CDAN1-interacting nuclease 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRT8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.130e-40
Identity = 104/250 (41.60%), Postives = 145/250 (58.00%), Query Frame = 2 
Query:  620 LRRQMFSRHIRKVD--WRCKQRTEEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVGAFEQGASVANL-------MRTPSLIADD------------RLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRP-SNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFDSYEKDIMVAADFPSPIMLP 1303
            ++RQ+  R  R      R ++  ++++A++   + +  IAR   + +SP +MAR+L+ A + G S   +       M+  S I  D            R+ RE+ +CI ED   SP  DR+R  LG EYEY+L + LR R + FESE  LREKG  KTPD+ L +P+ +K P S +  VV+WIDSKAMFGD HT+  E+ +QL  YVNRYGPG+VIYWFG V  L S      + DI++A  FP  I LP
Sbjct:   32 IKRQLLHRQFRSALRLHRQEKTLKKYVARFDASETMCHIARS--VAFSPCMMARLLLDA-KYGWSKTTISNFFKEAMKDESEIETDTNRRGLSEDEFGRVMREIRECIDEDVHCSPLADRIRHNLGLEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGIKDPNSGQLHVVNWIDSKAMFGDRHTHETENANQLQGYVNRYGPGMVIYWFGHVARLSS------DSDILIADAFPREISLP 272
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: V9E9B0_PHYPR (CDAN1-interacting nuclease 1 n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=V9E9B0_PHYPR)

HSP 1 Score: 157 bits (397), Expect = 8.860e-39
Identity = 98/228 (42.98%), Postives = 137/228 (60.09%), Query Frame = 2 
Query:  683 EEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVGAFEQGAS---VANL----MRTPSLIADD-------------RLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRP-SNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFDSYEKDIMVAADFPSPIMLP 1303
            + ++A+Y  G+ +  IA+   + +SP +MAR+++ A + G S   ++NL    M+  S +  D             R+ RE+ +CIS+D   SP  DR+R  +G EYEY+L + LR R + FESE  LREKG  KTPD+ L +P+ VK   + +  VV+WIDSKAMFGD HT+  E+ SQL  YVNRYGPG+VIYWFG V  L S      + DI++   FP  I LP
Sbjct:   56 KNYVARYSAGESMRQIAKS--VSFSPCMMARVVLDA-KYGWSKTTISNLFKEAMKDESELEADAPNHRGLSEDEYSRVVREIRECISKDEIGSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGVKSSKTGKLHVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGHVAELSS------DSDILITDTFPQEISLP 274
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: A0A329SSK1_9STRA (CDAN1-interacting nuclease 1 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SSK1_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.200e-38
Identity = 98/228 (42.98%), Postives = 135/228 (59.21%), Query Frame = 2 
Query:  683 EEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVGAFEQGAS---VANL----MRTPSLIADD-------------RLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRP-SNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFDSYEKDIMVAADFPSPIMLP 1303
            + ++A+    + +  IA+  G  +SP +MAR+L+ A + G S   ++NL    M+  S +  D             R+ +E+ +CI +D   SP  DR+R  +G EYEY+L + LR R + FESE  LREKG  KTPD+ L +P+ VK P S +  VV+WIDSKAMFGD HT+  E+ SQL  YVNRYGPG+VIYWFG V  L S      + DI++   FP  I LP
Sbjct:   56 KRYVARLGADESMGQIAKSVG--FSPCMMARLLLDA-KYGWSKTTISNLFKEAMKDESELETDAPNRRGLSEDEYARVMKEIHECIDQDEIGSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGVKDPKSGQLQVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGHVAQLSS------DSDILITDTFPQEISLP 274
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: A0A7S3XVT8_HETAK (CDAN1-interacting nuclease 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVT8_HETAK)

HSP 1 Score: 152 bits (384), Expect = 3.490e-38
Identity = 80/192 (41.67%), Postives = 119/192 (61.98%), Query Frame = 2 
Query:  821 MRTPSLIADDRLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVK----------RPSNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEF---DSYEKDIMVAADFPSPIMLPDGRIM*VWSNCYAGLPGR 1357
            ++  +LI + RLR+EVEDCI  D D+SP++D+VR+ +G  YE+ L ++L AR + F +E  LR +G  KTPD LL++P+ ++          R  +EW  + WIDSKAMFGD  T+  +H++Q+  YVNR+GPGLV+YWFG   +LV+ E    D   +D++V   FP  ++LP   +          LPGR
Sbjct:    3 VKDTNLIENLRLRQEVEDCIQGDPDFSPFVDKVRQRVGLAYEHRLARELAARSLPFAAEGALRGRGLAKTPDALLEIPVGIRKQTYQWEGAERVDSEWHTIYWIDSKAMFGDPETFKDDHRAQMEGYVNRFGPGLVVYWFGAAASLVAGEEGGEDGPGRDVLVWDRFPDEVLLPHREL---------ALPGR 185
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BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: A0A8K1FK04_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK04_PYTOL)

HSP 1 Score: 156 bits (394), Expect = 4.530e-38
Identity = 80/152 (52.63%), Postives = 101/152 (66.45%), Query Frame = 2 
Query:  848 DRLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRPSNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFDSYEKDIMVAADFPSPIMLP 1303
            DRL +E+ +CI  D   SP  DR+R  +G EYEYIL  KL++RG+ FESE  LREKG  KTPD+ L +P+ V+    E  VV WIDSKAMFGD HT+  E+ SQL  YVNRYGPG+VIYWFG V  L S      ++D+ +   FP+  +LP
Sbjct:  158 DRLWKEIGECIYADPYCSPLADRIRHNVGLEYEYILTAKLQSRGMVFESEDVLREKGLSKTPDVRLVLPIGVRDKEGELHVVHWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGHVANLSS------DRDVFITDAFPTDFLLP 303
[Close]
BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Match: K3WE22_GLOUD (CDAN1-interacting nuclease 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WE22_GLOUD)

HSP 1 Score: 156 bits (394), Expect = 7.760e-38
Identity = 90/209 (43.06%), Postives = 122/209 (58.37%), Query Frame = 2 
Query:  752 YSPYLMARILVGAFEQG---ASVANLMRTPSLIADD--------------------RLRREVEDCISEDRDYSPYLDRVRRGLGAEYEYILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRPSNEWMVVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFDSYEKDIMVAADFPSPIMLPDG 1309
            +SP +MAR+L+ A + G   A+++N  +      D+                    +L  EV +CI  D+  SP  DR+R  +G EYEY+L +KLR R + +ESE  LREKG  KTPD+ L +PM V+       VV+WIDSKAMFGD HT+  E+  QL  YVNRYGPG+VIYWFG V  L      S + D+++  +FPS I+LP G
Sbjct:  127 FSPCMMARVLLEA-KYGWSKATISNFFKEAFNEGDEDGGGTRKEPNRRGLSEREYSQLLLEVRECIDRDKYCSPLADRIRHNMGVEYEYLLLEKLRNRKLVYESEDVLREKGLSKTPDVRLLLPMGVRDSHGVLRVVNWIDSKAMFGDRHTHESENAGQLQGYVNRYGPGMVIYWFGHVANL------STDSDVVITHEFPSDIVLPGG 328
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXX0_ECTSI2.100e-16286.45CDAN1-interacting nuclease 1 n=1 Tax=Ectocarpus si... [more]
A0A7S2SDJ1_9STRA4.780e-5141.42CDAN1-interacting nuclease 1 n=2 Tax=Rhizochromuli... [more]
W7TNV0_9STRA5.650e-4643.43CDAN1-interacting nuclease 1 n=1 Tax=Nannochlorops... [more]
A0A4D9D1V9_9STRA4.050e-4543.39CDAN1-interacting nuclease 1 n=1 Tax=Nannochlorops... [more]
A0A2P4XRT8_9STRA2.130e-4041.60CDAN1-interacting nuclease 1 n=1 Tax=Phytophthora ... [more]
V9E9B0_PHYPR8.860e-3942.98CDAN1-interacting nuclease 1 n=4 Tax=Phytophthora ... [more]
A0A329SSK1_9STRA1.200e-3842.98CDAN1-interacting nuclease 1 n=2 Tax=Phytophthora ... [more]
A0A7S3XVT8_HETAK3.490e-3841.67CDAN1-interacting nuclease 1 n=1 Tax=Heterosigma a... [more]
A0A8K1FK04_PYTOL4.530e-3852.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WE22_GLOUD7.760e-3843.06CDAN1-interacting nuclease 1 n=1 Tax=Globisporangi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:1167715..1173486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.0
Seed ortholog evalue8.8e-137
Seed eggNOG ortholog2880.D7FXX0
Preferred nameC15orf41
EggNOG free text desc.Protein of unknown function TPD sequence-motif
EggNOG OGs2R9SY@2759,arCOG04990@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function with TPD sequence-motif
Ec32 orthologEc-16_005150.1
Exons7
Model size3054
Cds size825
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815448.4481666-UTR-P-fluviatile_contig11:1167714..11682101622815448.4481666-UTR-P-fluviatile_contig11:1167714..1168210Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1167715..1168210 +
1693561905.5689685-UTR-P-fluviatile_contig11:1167714..11682101693561905.5689685-UTR-P-fluviatile_contig11:1167714..1168210Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1167715..1168210 +
1622815448.531977-UTR-P-fluviatile_contig11:1171753..11734861622815448.531977-UTR-P-fluviatile_contig11:1171753..1173486Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1171754..1173486 +
1693561906.3319142-UTR-P-fluviatile_contig11:1171753..11734861693561906.3319142-UTR-P-fluviatile_contig11:1171753..1173486Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1171754..1173486 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815448.4601722-CDS-P-fluviatile_contig11:1168210..11683561622815448.4601722-CDS-P-fluviatile_contig11:1168210..1168356Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1168211..1168356 +
1693561905.58121-CDS-P-fluviatile_contig11:1168210..11683561693561905.58121-CDS-P-fluviatile_contig11:1168210..1168356Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1168211..1168356 +
1622815448.4698133-CDS-P-fluviatile_contig11:1168740..11687911622815448.4698133-CDS-P-fluviatile_contig11:1168740..1168791Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1168741..1168791 +
1693561906.2749643-CDS-P-fluviatile_contig11:1168740..11687911693561906.2749643-CDS-P-fluviatile_contig11:1168740..1168791Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1168741..1168791 +
1622815448.4811506-CDS-P-fluviatile_contig11:1169219..11693261622815448.4811506-CDS-P-fluviatile_contig11:1169219..1169326Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1169220..1169326 +
1693561906.2846797-CDS-P-fluviatile_contig11:1169219..11693261693561906.2846797-CDS-P-fluviatile_contig11:1169219..1169326Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1169220..1169326 +
1622815448.4907038-CDS-P-fluviatile_contig11:1169748..11699231622815448.4907038-CDS-P-fluviatile_contig11:1169748..1169923Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1169749..1169923 +
1693561906.2927735-CDS-P-fluviatile_contig11:1169748..11699231693561906.2927735-CDS-P-fluviatile_contig11:1169748..1169923Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1169749..1169923 +
1622815448.5040627-CDS-P-fluviatile_contig11:1170268..11703741622815448.5040627-CDS-P-fluviatile_contig11:1170268..1170374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1170269..1170374 +
1693561906.3012068-CDS-P-fluviatile_contig11:1170268..11703741693561906.3012068-CDS-P-fluviatile_contig11:1170268..1170374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1170269..1170374 +
1622815448.5135422-CDS-P-fluviatile_contig11:1170728..11708261622815448.5135422-CDS-P-fluviatile_contig11:1170728..1170826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1170729..1170826 +
1693561906.3118594-CDS-P-fluviatile_contig11:1170728..11708261693561906.3118594-CDS-P-fluviatile_contig11:1170728..1170826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1170729..1170826 +
1622815448.5227013-CDS-P-fluviatile_contig11:1171611..11717531622815448.5227013-CDS-P-fluviatile_contig11:1171611..1171753Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1171612..1171753 +
1693561906.3221579-CDS-P-fluviatile_contig11:1171611..11717531693561906.3221579-CDS-P-fluviatile_contig11:1171611..1171753Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1171612..1171753 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1085.1prot_P-fluviatile_contig11.1085.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 1168211..1171753 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1085.1

>prot_P-fluviatile_contig11.1085.1 ID=prot_P-fluviatile_contig11.1085.1|Name=mRNA_P-fluviatile_contig11.1085.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=275bp
MMLKSDYNRAVALCKASIDGGFDLTTADTRAEGLPFDALQSLRRQMFSRH
IRKVDWRCKQRTEEFLAQYRKGDRIIDIARQPGLRYSPYLMARILVGAFE
QGASVANLMRTPSLIADDRLRREVEDCISEDRDYSPYLDRVRRGLGAEYE
YILQQKLRARGVAFESESDLREKGAYKTPDMLLQVPMAVKRPSNEWMVVS
WIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGFVETLVSPEFD
SYEKDIMVAADFPSPIMLPDGRIM*
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mRNA from alignment at P-fluviatile_contig11:1167715..1173486+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1085.1 ID=mRNA_P-fluviatile_contig11.1085.1|Name=mRNA_P-fluviatile_contig11.1085.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5772bp|location=Sequence derived from alignment at P-fluviatile_contig11:1167715..1173486+ (Porterinema fluviatile SAG_2381)
CTTTATTCCACACACTGTTGCGATATTTTTCATTACAGAGCCTCACAGCC
CGTGGAAAATGACGTTACGAAAGCGGTTAGTGTGCACCCCCTTGGTGAAA
GCGTGGGGTTTGATGTCCGGTGGTGTGTCGTTCGCTGCCTGCTTGCTCTA
CTTCCTCACATGGGTGGATAATGGGAACCGTTGACTATTTCGTTATTTCG
TTATTTCCTCGCCACCCATAAGTGCAGGTTGCTAGCGTGGCTGTACCCAT
CTTTGCATTTGAAATCAATTTCAAACACAAGTGTTTGCTCAGCAGTGTGC
ACAAGATACAACAAGCTTTCGAACACACAGATGTGCCCACTCCTTGCTGG
CAACTTCGGTTACTTGGGTTGCATAGTTTATTATTCGCCTCAGAGCAACG
TCGCGCTCACCTTCTCGTGGCGTCGCACTTTTACTCTAACAGCAGCGTTT
GCAACCGATTGAGAACGCCGCTTCCGTTGAACGCGCGCTCATAGCCATGA
TGCTAAAGTCAGACTACAACAGGGCGGTGGCGCTGTGCAAAGCGAGCATA
GACGGGGGGTTCGATCTCACCACGGCGGACACCAGAGCAGAAGGTTTGCC
TTTCGATGCGCTCCAGAGCCTCCGGCGACAAATGTTCTCAAGGTGCGAGG
TGTGATGCGCTGCGATGTACTCTTGTAGAAGCTGAAATCACACCATTGGT
CCTGGTCAACGCTTACACAAGTCAAATGGTTTGACTTCGACTTCTACAGA
TGCTGTGCTAGGTCATTTTTGCACGAACCCGGCGATGGTTCGGCATTCAC
TGCCAACACAACCGCTTCTGCAAGGATGGGGATACTTGCGCGCCCCTCGC
AACATGGTAAATGCTAATCTGAGGATTTGGCCTAGGTATCACGGTAACAG
CCAGAGTATAGGGCTGCAGCAACCTACTTTGCGCGAAAATGGCGCCCCAT
TGCTCTTATTTTGGCGCCGCTGAAAGCAGGCTGGCTGACCCGGCTACTCT
TGTCTCGGCTTTCACCTACGTCTCAGGCATATTCGAAAGGTGGACTGGCG
ATGCAAACAGCGTACCGAGGAGTTCCTGTGAGTCATGCTTCCGCTCGTCG
GTTAACTAAGAGAGATATGATGGACTGCTGTAGGTGACGTCTTTGTCCTA
TGTTTGCTTTTCTATTCCTCATGTGTCCTGCTTGAGTCGAATGCATCATC
CGGCGGCGGATCTACAATGGTCCATTCTACCATCCCAGCATGGATTCGAC
GCGAGAGAGTCCTCTGTTGTTCCCTAGCCATAGAATCACCGCGATAATCT
CTGTTGCTGTTGCAGTTGGAAGCACATACCTTGCAGGGGGCATCGAATAT
GCAGATAGGGTGTTGATCCCGGAGGCTGTTTACTGTTGCCACAAACGGCC
CAACGGGATACTCAACGACCGATCACGCTGTCGCTTCGTCCCGTCGAATC
GGTCTGGCTTATTCTCGGATCGGGACGTCTCCTCTTTGTCTGCTTCACAT
TGCAGGGCGCAATACCGGAAAGGAGATAGAATCATCGACATCGCTCGACA
GCCAGGGTTGCGCTATTCCCCGTACCTGATGGCCAGGATCTTGGTCGGGG
CTTTTGAACAAGGTACTTTGCGTTCATTGAGTAAAGATGCGGACTCGAGC
ATAGAAGTCTCCGACATCGTCAGGAAATATGCGTCGTCTTCGACCAAGTC
CAACTGTTTAGTTTCCAACTGTTTGGTATGTATTCGCCGCACCTTGTATT
TTATGGCAGAGATGACATGGCATATCGCCGTATCGATCGGTTCGGTGACT
CTATGGGCTTCCTGCCGCGGATTACGCGTCGGTCCCCGAATCCTTGCTGC
GCCCTGAAATGGGCAGAACGTGTACTCTGCGTGTACTCCCGGCTCCACAT
CAAGATTGCATTCCCAAAATATCCATTCCCGATTTTTGACGACAACTTTT
AGCGGACTCACCCTTCCCCCTTGGGAACTCAGAAGCTTCCTCTCCCAAAC
TTCCTGCACTTGGGCGAATTGTATGTCTCCCAAGGAGCGTCTGTTGCTAA
CCTCATGCGAACGCCTTCGCTCATCGCGGACGACCGGCTTCGGCGAGAGG
TGGAAGATTGCATCTCGGAAGACAGGGACTACTCGCCCTATCTCGACAGG
GTGCGAAGAGGCCTTGGGGCCGAATACGAGTATATCCTGCAGCAGAAGCT
GCGTGCCCGGTACGTCGATTTGCAGTAGCTATGGGATATCCGCCGTCGTT
TGCGGACGGATTCGTTAGCTAAATCTGTGTCAAAGACCGCGGAGTGTTGG
CGCTGCGGCTGTTAACGGGCAAATCCCGCGTGAAAATCACATGGCGAATC
CCACGTAGAACTCACAACGAGGGCACAAGTGTGGACGGTGCAAGATTATA
GCGCTCGCTCTCTTTAGCTCTCGTAAACGGTACGCCATAATGCTCAACGA
TCCACCCAGTATTTGATGCATCCATGCGCACCCACGGATGAAATTTCATG
TGTTCGAACGTACTCAATTTGAGCGAAGCGCCTGTCCTTGTTACTCTCGA
CCAGGGGTGTCGCCTTCGAATCTGAATCTGATCTAAGAGAAAAGGGTGCG
TACAAGACACCAGACATGCTGCTGCAGGTGCCGATGGCAGTAAAAAGACC
TTCGAATGAGGTGAGGTCAGGCGGTGCTTTTGCGACGGCCACATGACTAT
CGGGAATGTTGGAGTCAAAAACCGGCAAACGGCTGGTGTGTCTGAAGGCG
GAGGGCGTTCAAGGGCCACTTGTCCGTGGGCTATGCTCATGGTGTACGCT
TTGGGCTTGGTGTTGTCACGACAGCTCGGGAAGTGGTACGTCGTCGATAT
CCTCACGTTGAGGCCGTTCCGATTTGCAAGAACGCTCTCGGGTTCTTAAT
TGGATCCCGGGTGGACGGCTGTGAGCTTTTCCAATGAGGTAGCAGCCTTT
GCATTTGGTTCACCAGATGCCACTCCTTCGCTGCTACGGTCTCTCGCCGC
TTCGTCTCTCGTAGTGGATGGTGGTTTCTTGGATCGACAGCAAGGCCATG
TTCGGAGACGAACACACCTACGTACAAGAGCACCAATCGCAGTTGCTCAG
CTACGTCAACAGGTACGTGCCCAACTCTGATCTGCCGTGCTATCGGTTGC
TCGTTGGGTCACCACCGAGCATCCTGACACTCTAGATGCTTTTTGGGTCG
GGTGCAGAGAGCCGCTTCATTTTGTTGCCGGTTGCCGTCGCACGAAGAAA
CCATGCAATGGAAGTAAGGGTGGCGCTCGTGTCCCCGTGCTTCTTGTTAC
CTCGATAATCCATTGCACTTGCTTCCTTTGCAGCCACCCTTGTTCGGAGG
TAAAATGCTCATTTGGAGGATCTCCGCTGTGGCCTCTGAAGTGGGTGTTG
CTTCCGTGGCTCCCGACACTCAGGGGTCACTTGTTACGCTTATCTGGGCT
GCATAAGACGGCTCGACTTGTTCTACTGCATATTGCACGCGAGCACCGCA
GAAGTCATGCGACAAAAGCCCACTTTCTCCCGAGGCGTCCCTCGATGGTG
CCTCATTTCGTCCCGCGTTTGACCCCCGCACAACCGTGAGCTGTTTGCCA
GAACATTTGCGTTCGAATCATTCAACGCGGAAGTGATGGATACCGCTATG
ATTTGTGCTGAGAAAACGGGCACTCATGAAAAACGCCAAGATGTCTGATG
ACCTTTACCTCCACTCAGGGCGTCGCTTGTTGCCGCGTGTTCTACGAAAG
GAAACCGAATGCCGGTGTAGCTGACTTCTTCACCTACTTTGAAAAGTACA
GGCCGCGCGCATAACCTTGTCGACCACGCATTGTTTTCGTTCTAATCGTG
TGTGTCGATGACACTCCCTGCTGTGTACCTTCGTCATCTCGGCAAAGGTA
CGGACCCGGGCTCGTTATCTATTGGTTTGGGTTCGTCGAGACGCTAGTAT
CTCCCGAGTTCGACAGCTACGAGAAAGATATCATGGTCGCGGCCGACTTT
CCCAGTCCGATTATGCTCCCTGACGGCCGAATTATGTAGGTGTGGTCGAA
CTGTTACGCCGGACTACCTGGCCGCTTCGTTGTTTTTTTCGCCTGTTTTG
CCGATCCACGTTGTTTTTGAGGTGGTGCTCTTTACGTAATTTCTTTGAGA
CAAAGAACGAGTGCACTCAATACTGTTGAGAGTGTATGTGTGCATGTGTG
TCGCCTTGTTTGACCTACATGTTCCGCCTTTAGGGAACACGTGTTGCACT
TTTGATTCTCGGATTGGAACCCCCTCTTCCTTCAGTCCTGCTGTGTGAAA
CCATGGGTGCCGCATTCGGCGGCCGCTCTTCGGCTGCCCAGAAAGGCGCG
TGCTTGTAGATGATGGCCGTTGGTGGCAAATGGCTTGTTGCGCTCACGCC
TTCAATTCACAAGGAATGAGCTTGACTTGCGCGGAAGCACTTCGAGAGAT
GTAGAATGACCGGGAGACACGTTGGTTACGAGTGCAAAACATACTTTCGT
GAAAGAGTACAACTGAGTCGCAATGTGGAGCTTTCCATGGTAGTTCTCAG
CGCGAGGTACCCAGGCTCCTGATAGCCTTGGCAATATGATGTGCAACGCA
CTGAAGAGAGAGTTTGGTGCAAGTTGTTTTTTACGGGTACCTCCCTCAGC
AACCTTTTTGAGTGGCAGTTGCGGGGAGCCATGGAAGGTAGGCATTCCTT
CCAGGAGTTGTTTCAAGGGACAGGTTCTAATTCTAACCCAGAATCTGATA
AACGTATCGGGCGGAGAAGACGCTCGAGGGGAGGGGTGGGGAGGCTTCGG
AGAGGCGCGCACCGGTGGAACGCTTACTGCGGAGACCCCGTCAGCATTTG
TTCGTGCAAGGCTGCTCTTCAATCCATGGAGGAGAGGGCTCCGTGGCACG
CCGCGTTTTGAAATTTGTGTCTTGCACGCGGAAAGCTCTGAGTATGGGAT
GTGTGTACTCGTGACCCTTTGGACATGATGTGATACGTGCAATTTCGCGA
GTTGCGTCTCGGGTTGTGACTCTACAATCCTCCAAAAGTACTTGATGGTG
ATTTGTGCGGGGGGTCGTTGAGTTTCAAAGCAAGGACGTCCTTATTTGGT
TGGTGAGGTGGCTCGGTCGAACGCGGTGTCCTTTGAACGGTTGAACCTTC
CGTTTGTATAGAGGGTCTCGGCTCGATTGATTCTAGATCTCTGCTCATTG
ACGGCCCAAAGTTTGCGTTCCCCGAGTGTCTGTGGATGCTTTTGAGTACC
CAGCAAAATGTGGCGGACTTGTCGTATGGTATTTGGGTGTCACACTCCGG
AAGGGTCGATCACCCAACACCTCTGCCTAGGACGTTCCCGTCTTTCACAT
CGGCAAAACAGAATCTGAAGAGACGCGAGTCGCATCAAATATGGACTCAA
TATTTTCGGTCGGTTGTGGTCAGCACGGTCCTCACTCTTCCTCTGAAATC
TTAGGCAGTGCAGCGATATGGAACGTGATTGGATGTTGCGTGAAGCGCCG
ACGGATGGTGAGGGCATCTCGCAAGCGCTGAGACATTCGAAGAGAAGACT
CTCCTCTGTGAAGACAAGTATTTCGTGTCGACCGGTGTTTCGACCTTCCT
GATCAGCTACGGTCGCTACGTGCGAGGTTTCCTGTTTTGATGCAGGTTCT
CTGCAAAGCCGCCGTCCCATGTGTTTCGGACGCATGCCTTACCGCTCCCT
TGATATCCTAGTTGCTGCGTGTGTGCTGCGCAAAAGTTGTCCATTTTCGC
TAGTTTGCGTCGCTAGTCAACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:1167715..1173486+

>mRNA_P-fluviatile_contig11.1085.1 ID=mRNA_P-fluviatile_contig11.1085.1|Name=mRNA_P-fluviatile_contig11.1085.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1650bp|location=Sequence derived from alignment at P-fluviatile_contig11:1167715..1173486+ (Porterinema fluviatile SAG_2381)
ATGATGCTAAAGTCAGACTACAACAGGGCGGTGGCGCTGTGCAAAGCGAG
CATAGACGGGGGGTTCGATCTCACCACGGCGGACACCAGAGCAGAAGGTT
TGCCTTTCGATGCGCTCCAGAGCCTCCGGCGACAAATGTTCTCAAGATGA
TGCTAAAGTCAGACTACAACAGGGCGGTGGCGCTGTGCAAAGCGAGCATA
GACGGGGGGTTCGATCTCACCACGGCGGACACCAGAGCAGAAGGTTTGCC
TTTCGATGCGCTCCAGAGCCTCCGGCGACAAATGTTCTCAAGGCATATTC
GAAAGGTGGACTGGCGATGCAAACAGCGTACCGAGGAGTTCCTGCATATT
CGAAAGGTGGACTGGCGATGCAAACAGCGTACCGAGGAGTTCCTGGCGCA
ATACCGGAAAGGAGATAGAATCATCGACATCGCTCGACAGCCAGGGTTGC
GCTATTCCCCGTACCTGATGGCCAGGATCTTGGTCGGGGCTTTTGAACAA
GGGCGCAATACCGGAAAGGAGATAGAATCATCGACATCGCTCGACAGCCA
GGGTTGCGCTATTCCCCGTACCTGATGGCCAGGATCTTGGTCGGGGCTTT
TGAACAAGGAGCGTCTGTTGCTAACCTCATGCGAACGCCTTCGCTCATCG
CGGACGACCGGCTTCGGCGAGAGGTGGAAGATTGCATCTCGGAAGACAGG
GACTACTCGCCCTATCTCGACAGGGTGCGAAGAGGCCTTGGGGCCGAATA
CGAGTATATCCTGCAGCAGAAGCTGCGTGCCCGGAGCGTCTGTTGCTAAC
CTCATGCGAACGCCTTCGCTCATCGCGGACGACCGGCTTCGGCGAGAGGT
GGAAGATTGCATCTCGGAAGACAGGGACTACTCGCCCTATCTCGACAGGG
TGCGAAGAGGCCTTGGGGCCGAATACGAGTATATCCTGCAGCAGAAGCTG
CGTGCCCGGGGTGTCGCCTTCGAATCTGAATCTGATCTAAGAGAAAAGGG
TGCGTACAAGACACCAGACATGCTGCTGCAGGTGCCGATGGCAGTAAAAA
GACCTTCGAATGAGGGGTGTCGCCTTCGAATCTGAATCTGATCTAAGAGA
AAAGGGTGCGTACAAGACACCAGACATGCTGCTGCAGGTGCCGATGGCAG
TAAAAAGACCTTCGAATGAGTGGATGGTGGTTTCTTGGATCGACAGCAAG
GCCATGTTCGGAGACGAACACACCTACGTACAAGAGCACCAATCGCAGTT
GCTCAGCTACGTCAACAGTGGATGGTGGTTTCTTGGATCGACAGCAAGGC
CATGTTCGGAGACGAACACACCTACGTACAAGAGCACCAATCGCAGTTGC
TCAGCTACGTCAACAGGTACGGACCCGGGCTCGTTATCTATTGGTTTGGG
TTCGTCGAGACGCTAGTATCTCCCGAGTTCGACAGCTACGAGAAAGATAT
CATGGTCGCGGCCGACTTTCCCAGTCCGATTATGCTCCCTGACGGCCGAA
TTATGTAGGTACGGACCCGGGCTCGTTATCTATTGGTTTGGGTTCGTCGA
GACGCTAGTATCTCCCGAGTTCGACAGCTACGAGAAAGATATCATGGTCG
CGGCCGACTTTCCCAGTCCGATTATGCTCCCTGACGGCCGAATTATGTAG
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