mRNA_P-fluviatile_contig11.1081.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1081.1
Unique NamemRNA_P-fluviatile_contig11.1081.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: D7FXX4_ECTSI (Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXX4_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 1.990e-158
Identity = 220/243 (90.53%), Postives = 233/243 (95.88%), Query Frame = 1 
Query:    1 MNNAPADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLCGQVQA-EQHGAPAVVPVPGVGQDHLHND 726
            MNNAPADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQ+WRLVTNFF+FGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCA+LM+GAAP++ MNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYL WV L+LSAVLGSPL+SDLLGIAVGHLFYFLEFVYPEVA+IRGWKWKQLMRAPR+VQQLCGQV A ++   PAVVPVP VGQ HLH+D
Sbjct:    1 MNNAPADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQVWRLVTNFFFFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCASLMIGAAPYLAMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLPWVLLLLSAVLGSPLKSDLLGIAVGHLFYFLEFVYPEVANIRGWKWKQLMRAPRIVQQLCGQVPAVDRQDVPAVVPVPDVGQGHLHDD 243
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: T0PTH3_SAPDV (Derlin n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PTH3_SAPDV)

HSP 1 Score: 278 bits (711), Expect = 1.010e-86
Identity = 136/241 (56.43%), Postives = 177/241 (73.44%), Query Frame = 1 
Query:   19 DPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLIC-KGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLCGQVQAEQHGAPAV---VPVPGVGQD-HLHND 726
            DPL WYY+IPV++R+YLT AF+TTA C L+  S   L+F++ LI  +GQ+WRL+TNF +FG   + FLFHMYFLVRYSR+LEEG FRGRT DF++ +LF AA M+  APF+ ++FLG  L FMMVY+WGRRNEH R++ LG+FPFTAPYL WV L+ S VLG+    DL+GI VGH++YF E VYP +A IRGW+ +++++ P  V+ LC    A   G P V   VPV  VG D HLH++
Sbjct:    3 DPLEWYYEIPVISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMILFGAAFMILVAPFVSVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPTIADIRGWRVRRVLKTPAFVKFLCNP-HAFTMGQPNVINDVPVENVGADGHLHHE 242
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: A0A7S2Y1F4_9STRA (Derlin n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F4_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.980e-85
Identity = 131/212 (61.79%), Postives = 162/212 (76.42%), Query Frame = 1 
Query:   16 ADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLIC-KGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLCG 648
            ADP SWY +IP+V+R+YLTA+F+TTA C LD  S   L+F+  LI  KGQ+WR++TNFF+FG   + FLFHMYFLVRY RLLEEG+FRGRT DFVWFLL    LM  AAPF+ + FLG  L FMMVYVWGR N+HVRM+ LG+FPFTAPYL WV L+ S +LG     D++GI VGHL+YF EFV+PEVA IR W+ K+++ AP  + +LCG
Sbjct:    4 ADPWSWYTEIPIVSRIYLTASFLTTAACALDIVSPYSLYFNVTLIFGKGQIWRILTNFFFFGLFSLDFLFHMYFLVRYCRLLEEGEFRGRTADFVWFLLVGGTLMTMAAPFVSVLFLGSSLTFMMVYVWGRLNQHVRMSFLGLFPFTAPYLPWVLLLFSVLLGHSPAVDVIGIVVGHLYYFFEFVFPEVARIRRWRVKRVLAAPSFLHRLCG 215
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: A0A835Z6W2_9STRA (Derlin n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W2_9STRA)

HSP 1 Score: 275 bits (703), Expect = 3.510e-85
Identity = 130/235 (55.32%), Postives = 169/235 (71.91%), Query Frame = 1 
Query:    1 MNNAPADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSP--LESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLCGQVQAEQHGAPAVVPVPG 699
            M+    DPL WYY+IP V+R Y+TAAFVTTA+  LD  S  + F +W L+ +GQ WRL+T F +FG L + FLFHMYFL RY RLLEEG+F  +T DFV+FLLF A LM+ A P + + FLG  L+FMMVYVWGRRNEHVRM+L G+ PFTAPYL WV L +S ++ +   L +DLLGI VGH++YFL F+YPEVA+IRGW+ ++++  PR++Q LCG+        P +V   G
Sbjct:    1 MDGNAGDPLQWYYEIPPVSRTYMTAAFVTTALTALDLVSPIQFFLNWKLVMQGQAWRLLTTFLFFGTLSLDFLFHMYFLARYCRLLEEGEFHRKTSDFVFFLLFGAVLMLAAQPLVSLPFLGSSLSFMMVYVWGRRNEHVRMSLFGLLPFTAPYLPWVLLAVSVLVNNSGALSTDLLGIGVGHMYYFLAFIYPEVAAIRGWRLRRVIHTPRLLQVLCGERALAHAEQPRIVEPAG 235
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: F0VYR4_9STRA (Derlin n=3 Tax=Albugo TaxID=65356 RepID=F0VYR4_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.870e-84
Identity = 134/237 (56.54%), Postives = 172/237 (72.57%), Query Frame = 1 
Query:   19 DPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLIC-KGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLCGQVQAEQHGAPAVVPVPGVGQDHLHND 726
            DPL WYYDIP+++R+YLT  F+TTA C LD  S   L++++ LI  KGQ+WRLV+NF +FG   + FLFHMYF+VRY RLLEEG FR R  D+V+ LLF AALM+  APF+ ++FLG  L FMMVY+WGRRN  VRM+ LG+FPFTAPYL WV L  S  LG+   +DL+GI VGH +YFLE +YP +A+IRGWK K+ +  PR+++ LC   QA      AV  V G+G +HLHN+
Sbjct:   61 DPLEWYYDIPIISRLYLTGCFLTTASCALDLISPFSLYYNFNLIFYKGQVWRLVSNFLFFGLFSLDFLFHMYFVVRYCRLLEEGSFRNRPADYVYMLLFGAALMILVAPFVSVHFLGSSLTFMMVYIWGRRNSDVRMSFLGLFPFTAPYLPWVLLSFSIALGNSATTDLIGIFVGHTYYFLEDIYPSIAAIRGWKIKRPLTTPRILKYLCDP-QAVTPQYNAVPNVIGLGGNHLHNE 296
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: A0A225VPV8_9STRA (Derlin n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A225VPV8_9STRA)

HSP 1 Score: 266 bits (679), Expect = 5.060e-82
Identity = 124/209 (59.33%), Postives = 158/209 (75.60%), Query Frame = 1 
Query:   19 DPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLIC-KGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQL 642
            DPL WYY+IPVV+R+YLT +F+TT  C LD  S   L+F++ LI  KGQ+WRL TNF +FG   + FLFHMYF+VRY RLLEEG FRGRT DFV+ LL  A  M+  APF+ ++FLG  L FMMVY+WGRRNEHVRM+ LG+FPFTAPYL WV    S +LG+   +DL+GI VGH++YFLE VYP +ASIRGWK ++ +  PR+++ +
Sbjct:    3 DPLEWYYEIPVVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLATNFMFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFVYMLLLGAVFMIVLAPFVNIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTQRPLETPRIIRYM 211
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: A0A485LAJ1_9STRA (Derlin n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LAJ1_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.580e-81
Identity = 127/229 (55.46%), Postives = 167/229 (72.93%), Query Frame = 1 
Query:   19 DPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLIC-KGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLCGQVQAEQHGAPAVVPVPGV 702
            DPL WYY+IP+++R+YLT AF+TTA C L+  S   L+F++ LI  +GQ+WRL+TNF +FG   + FLFHMYFLVRYSR+LEEG FRGRT DF++ LL  A  M+  APF+ ++FLG  L FMMVY+WGRRNEH R++ LG+FPFTAPYL WV L+ S VLG+    DL+GI VGH++YF E VYP +A IRGW+ ++++  P  V+ LC   QA  +  P V  +P V
Sbjct:   36 DPLEWYYEIPIISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMLLLGAFFMILVAPFVSVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPAIADIRGWRVRRVLETPTFVKFLCNP-QAFTNQPPVVNDIPVV 263
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: A0A7R9UC87_9STRA (Derlin n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC87_9STRA)

HSP 1 Score: 263 bits (673), Expect = 4.530e-81
Identity = 124/212 (58.49%), Postives = 159/212 (75.00%), Query Frame = 1 
Query:   10 APADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLC 645
            APA P SWY +IP V+R+YLT + + T  C +D  S   L+++W LI +GQLWRL TNF +FG   + FLFHMYFLVRYSRLLEE +FRGRT DF + LLF A+LM+  APF+ ++FLG  L+FMMVYVW RRNEHVRM+  G+ PF APYL WV L  S +LG     DL+GIAVGH++YFLEFV+P VASIRGW+ +++++ P V+Q +C
Sbjct:   25 APASPWSWYAEIPPVSRLYLTLSVLVTLACAVDLISPFALYYNWSLISEGQLWRLFTNFLFFGTFGLDFLFHMYFLVRYSRLLEENEFRGRTADFAFMLLFGASLMLCVAPFVHIHFLGSSLSFMMVYVWARRNEHVRMSFFGVVPFNAPYLPWVLLGFSTLLGHSPTIDLIGIAVGHIYYFLEFVFPAVASIRGWQTRKVLQTPAVLQYVC 236
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: A0A0P0YV63_9STRA (Derlin n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV63_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.200e-80
Identity = 116/219 (52.97%), Postives = 159/219 (72.60%), Query Frame = 1 
Query:   10 APADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVVQQLCGQVQAEQ 666
            A  D LSWY  IPV++R+YLT A +TTA C ++ T+   L+FSW L+ KGQ+WRL+T++ +FGA  + F+FHMYFL+RYSR LEEG+FRG+T  ++W L+F    + G A +  + FLG  L FMM+YVWGRRNE V+M+  G   F APYL WV L  S ++G+P+ +DL+GI VGH++YFL+FVYP VA IRGWK +++M  P V+Q +CG + A Q
Sbjct:   16 AEVDVLSWYMGIPVISRLYLTGALLTTAACAVEFTTPYSLYFSWDLVFKGQVWRLITSYLFFGAFSIDFMFHMYFLIRYSRFLEEGEFRGQTAKYLWMLMFGICCISGIAVYTNIPFLGNALTFMMLYVWGRRNESVKMSFFGFLQFNAPYLPWVMLGFSVLMGNPISTDLIGIVVGHVYYFLDFVYPVVADIRGWKMRKIMEPPTVLQWMCGDMPANQ 234
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BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Match: A0A8K1C5Z3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Z3_PYTOL)

HSP 1 Score: 260 bits (664), Expect = 1.130e-79
Identity = 119/206 (57.77%), Postives = 155/206 (75.24%), Query Frame = 1 
Query:   19 DPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLIC-KGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWKWKQLMRAPRVV 633
            DPL WYY+IP+++R+YLT AF+TT  C LD  S   L+F++ LI  KGQ+WRL+TNF +FG   + FLFHMYF+VRY RLLEEG FRGRT DF++ LL  A  M+  APF+ ++FLG  L FMMVYVWGRRNEHVRM+ LG+FPFTAPYL WV    S +LG+   +D++GI +GH++YF E VYP +A IRGWK ++ +  PR++
Sbjct:    3 DPLEWYYEIPIISRLYLTGAFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLLTNFLFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFLYMLLLGAFFMILVAPFVNIHFLGSSLTFMMVYVWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSLLLGNSATTDIMGIVIGHIYYFFEDVYPTIARIRGWKTQRPLATPRLI 208
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXX4_ECTSI1.990e-15890.53Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXX4_... [more]
T0PTH3_SAPDV1.010e-8656.43Derlin n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0... [more]
A0A7S2Y1F4_9STRA1.980e-8561.79Derlin n=2 Tax=Fibrocapsa japonica TaxID=94617 Rep... [more]
A0A835Z6W2_9STRA3.510e-8555.32Derlin n=2 Tax=Tribonema minus TaxID=303371 RepID=... [more]
F0VYR4_9STRA1.870e-8456.54Derlin n=3 Tax=Albugo TaxID=65356 RepID=F0VYR4_9ST... [more]
A0A225VPV8_9STRA5.060e-8259.33Derlin n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0... [more]
A0A485LAJ1_9STRA1.580e-8155.46Derlin n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0... [more]
A0A7R9UC87_9STRA4.530e-8158.49Derlin n=1 Tax=Pinguiococcus pyrenoidosus TaxID=17... [more]
A0A0P0YV63_9STRA2.200e-8052.97Derlin n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690... [more]
A0A8K1C5Z3_PYTOL1.130e-7957.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:1120887..1125618 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score465.3
Seed ortholog evalue1.7e-128
Seed eggNOG ortholog2880.D7FXX4
Preferred nameDERL2
KEGG rclassRC00003,RC02120,RC03389,RC03391
KEGG koko:K13989,ko:K19737
KEGG ReactionR11216,R11218,R11220
KEGG Pathwayko04141,map04141
KEGG ModuleM00403
GOsGO:0001558,GO:0001967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006517,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0006986,GO:0007154,GO:0007165,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010605,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0018193,GO:0018196,GO:0018279,GO:0019222,GO:0019538,GO:0019941,GO:0023052,GO:0030162,GO:0030163,GO:0030176,GO:0030307,GO:0030433,GO:0030968,GO:0030970,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031982,GO:0031984,GO:0032268,GO:0032269,GO:0032386,GO:0032387,GO:0032527,GO:0032879,GO:0032880,GO:0033036,GO:0033157,GO:0033554,GO:0034613,GO:0034620,GO:0034645,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0040008,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042742,GO:0042886,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045861,GO:0045927,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051224,GO:0051234,GO:0051246,GO:0051248,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051705,GO:0051707,GO:0051716,GO:0060255,GO:0060341,GO:0061136,GO:0065007,GO:0070085,GO:0070201,GO:0070727,GO:0070861,GO:0070862,GO:0070887,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0097708,GO:0098542,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901799,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903513,GO:1903573,GO:1903827,GO:1903828,GO:1904152,GO:1904153,GO:1904292,GO:1904293,GO:1904380,GO:1904950,GO:1905897
EggNOG free text desc.ubiquitin-dependent ERAD pathway
EggNOG OGsCOG5291@1,KOG0858@2759
EC2.1.1.320
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDerlin
Ec32 orthologEc-16_005190.1
Exons7
Model size1749
Cds size729
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1081.1prot_P-fluviatile_contig11.1081.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 1120887..1124506 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815447.7735212-CDS-P-fluviatile_contig11:1120886..11209761622815447.7735212-CDS-P-fluviatile_contig11:1120886..1120976Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1120887..1120976 +
1693561901.026213-CDS-P-fluviatile_contig11:1120886..11209761693561901.026213-CDS-P-fluviatile_contig11:1120886..1120976Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1120887..1120976 +
1622815447.7863812-CDS-P-fluviatile_contig11:1121485..11216321622815447.7863812-CDS-P-fluviatile_contig11:1121485..1121632Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1121486..1121632 +
1693561903.8978026-CDS-P-fluviatile_contig11:1121485..11216321693561903.8978026-CDS-P-fluviatile_contig11:1121485..1121632Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1121486..1121632 +
1622815447.798691-CDS-P-fluviatile_contig11:1122210..11223771622815447.798691-CDS-P-fluviatile_contig11:1122210..1122377Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1122211..1122377 +
1693561904.2438846-CDS-P-fluviatile_contig11:1122210..11223771693561904.2438846-CDS-P-fluviatile_contig11:1122210..1122377Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1122211..1122377 +
1622815447.8169346-CDS-P-fluviatile_contig11:1122768..11228861622815447.8169346-CDS-P-fluviatile_contig11:1122768..1122886Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1122769..1122886 +
1693561904.2543275-CDS-P-fluviatile_contig11:1122768..11228861693561904.2543275-CDS-P-fluviatile_contig11:1122768..1122886Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1122769..1122886 +
1622815447.8338215-CDS-P-fluviatile_contig11:1123510..11235971622815447.8338215-CDS-P-fluviatile_contig11:1123510..1123597Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1123511..1123597 +
1693561904.2678964-CDS-P-fluviatile_contig11:1123510..11235971693561904.2678964-CDS-P-fluviatile_contig11:1123510..1123597Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1123511..1123597 +
1622815447.8749554-CDS-P-fluviatile_contig11:1124386..11245061622815447.8749554-CDS-P-fluviatile_contig11:1124386..1124506Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1124387..1124506 +
1693561904.275545-CDS-P-fluviatile_contig11:1124386..11245061693561904.275545-CDS-P-fluviatile_contig11:1124386..1124506Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 1124387..1124506 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815447.8868256-UTR-P-fluviatile_contig11:1124506..11246381622815447.8868256-UTR-P-fluviatile_contig11:1124506..1124638Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1124507..1124638 +
1693561904.2884564-UTR-P-fluviatile_contig11:1124506..11246381693561904.2884564-UTR-P-fluviatile_contig11:1124506..1124638Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1124507..1124638 +
1622815447.898705-UTR-P-fluviatile_contig11:1124730..11256181622815447.898705-UTR-P-fluviatile_contig11:1124730..1125618Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1124731..1125618 +
1693561904.3044748-UTR-P-fluviatile_contig11:1124730..11256181693561904.3044748-UTR-P-fluviatile_contig11:1124730..1125618Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 1124731..1125618 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1081.1

>prot_P-fluviatile_contig11.1081.1 ID=prot_P-fluviatile_contig11.1081.1|Name=mRNA_P-fluviatile_contig11.1081.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=243bp
MNNAPADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLI
CKGQLWRLVTNFFYFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVW
FLLFCAALMVGAAPFMGMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPF
TAPYLAWVFLILSAVLGSPLESDLLGIAVGHLFYFLEFVYPEVASIRGWK
WKQLMRAPRVVQQLCGQVQAEQHGAPAVVPVPGVGQDHLHND*
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mRNA from alignment at P-fluviatile_contig11:1120887..1125618+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1081.1 ID=mRNA_P-fluviatile_contig11.1081.1|Name=mRNA_P-fluviatile_contig11.1081.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4732bp|location=Sequence derived from alignment at P-fluviatile_contig11:1120887..1125618+ (Porterinema fluviatile SAG_2381)
ATGAACAACGCCCCAGCGGATCCCCTCTCGTGGTACTATGATATTCCTGT
TGTGACGCGGGTGTATCTTACAGCCGCCTTCGTCACTACGGTGAGAATTG
GACCCACGTAGTTCCGCCGCCCACCGGATCGGCCGAGCTCTCCAGCGTTC
AAGCGCGTTTCGGTCGCCCACCAACACGTGTCGTCGTTTCTTCACTCTCT
TTCATTGTTTCGTTGCATGAAGTCATACTTCCGCGTGTCGACACCTGTTG
ATTGTCGCGTTGGCAAGTTCTACTGTAATTTTATTAAAAATCAAAACACT
TGACCTATCTGGGCAGCATTATTAGCCGGAAAATCGTTTGACAAGTGAGT
TCGTGTTTTTTGAGCGCCACCGAGAGATTTGCAGCGGCAGTAGCAGTCGT
ACACGTGTGCCTGCCACATTATCACAGCGCGTGCTTGTGCTGACCACGGC
CCGTAAACCTCTCCTGTCAAGCAGTCGAGATGAGGTTCGCAAAAATCGCC
GCATTTTGCACGACGCGCTGAACCTCCTAATTGTTCCCGCCCCACCAACC
TTGCCTGTTGCTGCTGTCAACCCGTCCTCGCGTCCGCGGTGGGAGCCAGG
CTATGTGTCAGTTGGACGCAACCTCTTCGACAAAACTCTTCTTCAGCTGG
CCTTTAATATGCAAGGGGCAGCTCTGGCGACTAGTGACAAACTTCTTTTA
CTTCGGGGCCCTGGATGTGCACTTTCTTTTCCACATGTACTTCCTCGTGA
GTTTTGTGTTCTCACAGCGTAGCTGGATGATAAGTACTCCGGAGTATTAG
TTGTACCATCCCTGCACGCTGTCCCTGTTTGTGATAAAGCCTGGATTCTT
GAACACTCGCATGTCAATGGATGCCTTCGATTGATGCACTCGTGAGCACT
TGGTCTCGCCTCTCGCTCACCACTTAATGGCATAGAAACAATTCCGGCTC
AAAATTGAGTAGCCCGAGTGGCCGTTCAAGCCCGTGATCATGATAGTGCA
GGAACCTGAGTCAACCCATTCAAGGTCGGCACGAACCCCGCCTGCCTAGA
GTGAGTGTTTCGGCAAGGGATTGGGGACGGGGATCGCCAAAAGGGATCGT
ATGCACGTGATGGTAGCCAGCTTCGAGCTGGAGAGTACTAAGCGAGTTTT
TTCTGGATATCCTCCCTCGCTGTCCAAGATGAAATCGTCTCAGGCGAAAT
GCGACCGTTTCTGCGTTAACAATCCGGATGGCTGTTCCCACCGCTCGCTT
TGTTTGTAGACACGCTGACGTTTTCGGCTTCTCCTTTCCTGGTTCAACCG
CCCCGCGCCCCACCACCGCTCCAGGTGAGATATAGCCGATTGCTCGAGGA
GGGAGACTTCAGGGGGAGGACGGGAGACTTCGTGTGGTTCTTGCTCTTCT
GCGCCGCACTCATGGTAGGGGCGGCTCCCTTCATGGGCATGAACTTTCTA
GGCCGCCCGTTGGCCTTCATGATGGTTTACGTCTGGGGAAGGTGGGTACC
GCTGCGAAAGGAATGGTTGCGGCTCGAACCGCGCATCAAGATAGACGGAC
GGAATTTTGTCGATCATTTTTGCGAGCGTTTTTCTATTTCGTACTCACAC
ATGCGTTTCCTGTAAGCGTTGCCGGGTTGATGTCGGCGGAATTGGGATTT
ATCCCTGCAGAGGCAAGCGCAGGCAACGCCTTTTTGCTCGATAGGCAGCG
AATCTTCGATGGATAAAATATGCTGGGGTAGATTACCAGCCCCAACTTGT
TGCTTTGGAGGTCCCGTGAATCTCCTTTTAGCCTCTTCACATCTCACTCG
TGCACGTTCCCACCGTTGTTGCACCCTGCTTCGTACCACATATCATGTCG
TACCTTTCCCTTCCACTGATTTCCTTCTGCAGGAGAAATGAGCACGTGCG
AATGAACCTGCTGGGAATGTTTCCGTTCACAGCGCCCTACCTGGCGTGGG
TGTTTCTTATCCTATCTGCCGTACTTGGATCCCCGCTGGAAAGCGACCTG
GTGAGCGAGTTGCCATTCGTTTTTCAAAGTGAATCAGGGCTGTTCGTGGT
GAAACACAGCCAAAAGTACGGCAACGGTGAGTATGGAGCGGACAAGATGT
GGTGCGAAAGTTTGCGAGATCGCTGGATGTAGTTCCGGCGGTTTCAGGCA
GGCACGACGACCACCAGCAGGTTCAGAGAGCAGAGGTGATGTATTGGGAG
CGGAATACGTCTAGCGTAACGGTCGTACCAACAGATAGGCAGGGTCTGGT
TGGGTTGAGCTTTCCTCACCCCCCCACAAATTTGTTGGGTACGGCAATCG
GCCGTTCACAGATTCGCATTAGATCAGGTTTTGTTTTTCAGAACTATGTG
GGTAATGTATGTGATCTGTGCACAACCCCGACCACGCCACGAGCTGTGTG
TGTGGCAACGGAGGGCTACTTGCTGATTGCTGTCGGGATCCCGCGCACCC
CCCTCGCGGTCGAAGGTTTTGATTTCGTGGTGAAGCGCTCTTGTGTAGCG
TCGCACTAGCGCCCAGCCCCTGACCGTACCCCCCCGACTCCCTCCCTGCC
CGACCGTACGCCCTTCCCGTGTATCATTTTGCGCCTTTTCCCATCCTGCG
GTCGCTGGTCTGACGCCGTTGCAGCTGGGCATCGCCGTCGGCCACCTGTT
TTACTTCCTCGAATTCGTGTACCCGGAAGTGGCCTCAATCAGGGGTTGGA
AATGGAAACAGGTAACATCACGCACGGGCGCGAGTGTTCGCCCCACACCA
TTTGCGCGCATTTAGCTGTACGTGTCTGCTGCCTGCTTGTTTATCCTCGC
CGTAGTCCTCGCGCTCTTGTGTCGTTCCTGCTGCTCGAGTCTCCACCAGC
GTAAATTTGGTGCTTCGAAACCCCGAGGTGTGCGCCTCGCCAGAAGGTCA
AAGGATGTCAGTACCTGCTTTCGACGTACCAGACTTGTGCTGTGACTGCC
TCACCACGTTATGCGAGATGAGTTTACACCCCACCTGTTTGTGGCAGATC
CTCGTTCTTCTATGGAGTAGGAGTGTAACCTCGTTCGTATGTCGAGGAGG
AGTTTGTCAATCGTAGAATAATCGAACAAAGGAAGCGTCGACGATCTCGC
ACCTATCCGTGTGTTGTCGTCGTTATTGGTCCAATAATTGGGTTGCTGGC
AACGAGAATTGTGACCCGGCTTTCCTACATGAGAAGTAGTGCAGACCACG
AAGAATCCAGGTGGTGTTCTCAGTCCACTCATCTTCGCGCTCTGTGTGCA
CTCACTAAGCGGGTCACGAACGACGCGGCTCTCAGCAGCGCAGACGCTCG
CACGAGACACACATGTCGTGAGCGATTGGCGCCCCTTTCGCTTTGTCGTT
GACGACGACGACGCCGTGCAATGCCCGCGCCCCCGCATCCGATCGATCGA
TCGATCGATCGATTGTCGCTCCTTCCGTCACTCGTTTTCCCGTTGCTATT
CAACTCTGTCCGCCCTGCCTCATTACGTGTCTGTTCCGTCGGTCTCGCAG
CTGATGCGTGCGCCTAGGGTCGTGCAGCAGCTTTGCGGACAGGTGCAAGC
AGAGCAGCACGGAGCACCAGCTGTGGTACCAGTGCCCGGTGTTGGACAGG
ACCACCTCCACAACGACTGACTGAACTTTCTGATGAAGCAGACATTTCAA
CGTCTTGCTTGGGGCGAGCGCCCGAGCACCCCCTCCCAGTCAAATTCTTT
GGAGGGAGGAGGACGACGGATTGCAACATATGCATCCCCGAGGTCGGCGA
TTGCAGAAAGGTGGATGGTTCTGAGGAGGTGTCTGGGAGCGCCGTTGGGC
AGAGGTGTACGTTAGGCCCCGGTGCGCTCTTTCGATCTGCCAAGGAATCT
ACCCGCAGAGAGAAAAGATCTCCACCCTCTTGACGTTTCGCGCCGTGGTG
GAGTCTTCCTTGCTTTTGCGCTTCGTGTCGTCGCGCACCGTGGTGCCACG
CGGGCGGGTCTCGCAGTGAAGCGCAGCGGCAGGACTGCTGTTTTGCTCCG
CTGGGGCAACTCGATGCCACGACCCATGGTTCTCGTGATGAAGAATCGGG
AACTGGTCGGGGTTGCCTGTGGAAAAGGGATGAGTTCGTGGTAGGGACGG
CTTCGCTGCGTGGCGTCGTAAGAGGGGGCATTCTGGCGGCCGCCTTACTA
GCACGGGATTTATGGTCTGCGGCTGGATGTTGTACGAGTAAGTTTAGAAA
ACGTACCTGCGCGTGCTTAATAGCTTTTCTTAGTATTGTGGTTGTTGGAC
ATCTGCCGTCGACCGTTGTATCACATTTGTCGCAGAGCCGTCTTGACGAG
GTAAATTTTGAATTGTGTGGCGGTTGAGAACATGCATGACTATGACGTGC
GTGGCAAACCGTGAGCGTGCAGTGAAATAGAGCGAGTGAACGAGAATACC
ACTGCCTCTCGCCAAAACACAACAGGACACCGACCATACCGCAGCGTCCA
AACATGCCGTGCAGGGTGGTCCAATGAACCAATGTCTGAATCGATCCCTG
TTGATCGAGTCCCAGTTGGCTCGTCGGATGGTGTGACGAACGCCTCGACC
CGAGAATTGAATCTGAAACGCCTGCACGATATTTTTTTTTCACTTGTTTG
TGTCCCCCCTGCCAATGAAGCTGGTTGTGTGCAAGAATGACTGCTACCGT
GTGGGTTTACGCGTGCAGTGCTTGGAAACGTTTGTCAAAACTATCCTGTC
ATAGGGAGGCAGCTTTGTCGTCTGTCCGGTGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:1120887..1125618+

>mRNA_P-fluviatile_contig11.1081.1 ID=mRNA_P-fluviatile_contig11.1081.1|Name=mRNA_P-fluviatile_contig11.1081.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1458bp|location=Sequence derived from alignment at P-fluviatile_contig11:1120887..1125618+ (Porterinema fluviatile SAG_2381)
ATGAACAACGCCCCAGCGGATCCCCTCTCGTGGTACTATGATATTCCTGT
TGTGACGCGGGTGTATCTTACAGCCGCCTTCGTCACTACGATGAACAACG
CCCCAGCGGATCCCCTCTCGTGGTACTATGATATTCCTGTTGTGACGCGG
GTGTATCTTACAGCCGCCTTCGTCACTACGGCTATGTGTCAGTTGGACGC
AACCTCTTCGACAAAACTCTTCTTCAGCTGGCCTTTAATATGCAAGGGGC
AGCTCTGGCGACTAGTGACAAACTTCTTTTACTTCGGGGCCCTGGATGTG
CACTTTCTTTTCCACATGTACTTCCTCGCTATGTGTCAGTTGGACGCAAC
CTCTTCGACAAAACTCTTCTTCAGCTGGCCTTTAATATGCAAGGGGCAGC
TCTGGCGACTAGTGACAAACTTCTTTTACTTCGGGGCCCTGGATGTGCAC
TTTCTTTTCCACATGTACTTCCTCGTGAGATATAGCCGATTGCTCGAGGA
GGGAGACTTCAGGGGGAGGACGGGAGACTTCGTGTGGTTCTTGCTCTTCT
GCGCCGCACTCATGGTAGGGGCGGCTCCCTTCATGGGCATGAACTTTCTA
GGCCGCCCGTTGGCCTTCATGATGGTTTACGTCTGGGGAAGGTGAGATAT
AGCCGATTGCTCGAGGAGGGAGACTTCAGGGGGAGGACGGGAGACTTCGT
GTGGTTCTTGCTCTTCTGCGCCGCACTCATGGTAGGGGCGGCTCCCTTCA
TGGGCATGAACTTTCTAGGCCGCCCGTTGGCCTTCATGATGGTTTACGTC
TGGGGAAGGAGAAATGAGCACGTGCGAATGAACCTGCTGGGAATGTTTCC
GTTCACAGCGCCCTACCTGGCGTGGGTGTTTCTTATCCTATCTGCCGTAC
TTGGATCCCCGCTGGAAAGCGACCTGGAGAAATGAGCACGTGCGAATGAA
CCTGCTGGGAATGTTTCCGTTCACAGCGCCCTACCTGGCGTGGGTGTTTC
TTATCCTATCTGCCGTACTTGGATCCCCGCTGGAAAGCGACCTGCTGGGC
ATCGCCGTCGGCCACCTGTTTTACTTCCTCGAATTCGTGTACCCGGAAGT
GGCCTCAATCAGGGGTTGGAAATGGAAACAGCTGGGCATCGCCGTCGGCC
ACCTGTTTTACTTCCTCGAATTCGTGTACCCGGAAGTGGCCTCAATCAGG
GGTTGGAAATGGAAACAGCTGATGCGTGCGCCTAGGGTCGTGCAGCAGCT
TTGCGGACAGGTGCAAGCAGAGCAGCACGGAGCACCAGCTGTGGTACCAG
TGCCCGGTGTTGGACAGGACCACCTCCACAACGACTGACTGATGCGTGCG
CCTAGGGTCGTGCAGCAGCTTTGCGGACAGGTGCAAGCAGAGCAGCACGG
AGCACCAGCTGTGGTACCAGTGCCCGGTGTTGGACAGGACCACCTCCACA
ACGACTGA
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