prot_P-fluviatile_contig11.1073.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1073.1
Unique Nameprot_P-fluviatile_contig11.1073.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1059
Homology
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BLAST of mRNA_P-fluviatile_contig11.1073.1 vs. uniprot
Match: D7FXW0_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW0_ECTSI)

HSP 1 Score: 773 bits (1996), Expect = 7.360e-263
Identity = 676/959 (70.49%), Postives = 766/959 (79.87%), Query Frame = 0 
Query:  103 LRFAAMMELSPPVAAKLDVSRVLQELRDEGADINLRTYRGCLAFLAKTGRGKEALMYLQEMEAARVTADGSCLGHVATACARGQNLDSALAVVRGMLSKGHNVSRTFNNIMLAIVNGQALRPRERNG-AKFRRTALSSTECDRAVEVLREMQDCGAHPTVFTYNLLIGALARSRRTNDEVLGLLDEMRKAGVPPDSYTYVGVIKGLKGSDRNALMRRVLENAKNELRGAELSAVYSAVISGYAEEGSWQPATDLLEEMFTSKVPRDEYTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGRPNKAWNNDRTSSTFIRPKSAKNPRGEPLGLSPAQTEAYDAGDFALGLMEEMKQDGVRPDVITYGSLMSALSPRGAAGADAVXXXXXXXXXXXXXXXXXXXXXXIRAYGDKGNWQKAEQMLVEMKAEHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRERGQSADPVVXXXXXXXXXXXXXXXXXXXXLSKLVAEMPPVQSLLWGYNATISALGKAKQMEGIKDLLATMKASGLKPDVYTYAAMMRATGINGLWEESLAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDVFCFNALMGGVLKKDQGEKVLELYRTMEDRGVEPDNLTMSTVLRAAEQTGAADWAWLLMEKLREVGGV-SMHVYADAIRACCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETATGGAVGSGPGLRRSLAIFTKAREIFEGENIGRLYTSILTACAREGGEEGLNAARDIVAEMRASPFPPDKAVFGPAASAFASGGDWEGAIDLLEEGAAIGALPNSMASEDVRAMAYQKGQLMAANTRLNSIVYLEMD 1059
            +RF AM+ +  P AAK+DV+RV+QELRDEGA+ NLRTYRGCLAFLAK GRG+EALMYL+EME+A V AD +CLGHVATACARGQ LD+ALA+VRGM+SKGH+V+RT+NNIMLAIVNGQA   R  +  + FRRTALS+ EC+ AV +L EMQ CGAHPTVFTYNLLI ALARSRR + EVL LLD+MR  G+ PDSYTYVGV+KG++G  +NA+MR VLE+AK EL G +LSAVYSAV+SGYA +GSW+ A+ L++EMF + VPRDEYTY          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F+GRPNKAWNN+R +S+F+RP S +  +G   GLSPAQ EA DAGDFALGLMEEMK++GV PD+ITYGSLMSALSPRG AGAD  XXXXXXXXXXXXXXXXXXXXXX RAYGDKG+W++AEQMLV M+ EH  XXXXXXXXXXXXXXXXXXXXXXX      MRE G SADPV XXXXXXXXXXXXXXXXXXXX SKLV+E PP++SL+WGYNA ISALGKAKQMEGIKDL+ATMKASGLKPD YTYAAMMRA+GI+G WEES +M XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  VEPD+LTMS VLRAAEQ GAA+WAWLLMEK+RE GGV +M VYAD IRACC +        XXXXX XXXX                      E     A  S P LRR+++IF +AR+++EGENI RLY  IL ACAR+   EG +AAR+++ EMR S FPPDKA FGPAASA AS GDW  AI++L+EGAA+GALPN++A ED+RA A+Q+GQL  AN RL+ I+Y E+D
Sbjct:    1 MRFKAMLGMRRPNAAKVDVTRVMQELRDEGAEFNLRTYRGCLAFLAKGGRGREALMYLEEMESAGVAADNACLGHVATACARGQMLDTALAMVRGMVSKGHSVARTYNNIMLAIVNGQAFTSRTSSSRSSFRRTALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALARSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVLEDAKLELEGLDLSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPNKAWNNNRETSSFLRPTSTRENKGR--GLSPAQAEASDAGDFALGLMEEMKREGVEPDIITYGSLMSALSPRGLAGADXXXXXXXXXXXXXXXXXXXXXXXXXRAYGDKGDWERAEQMLVGMQKEHXXXXXXXXXXXXXXXXXXXXXXXXXLETLDEMRECGLSADPVXXXXXXXXXXXXXXXXXXXXXXSKLVSEKPPMRSLMWGYNAAISALGKAKQMEGIKDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMREEGGVIAMQVYADGIRACCVKTRTIADDDXXXXXGXXXXNGEGVESEEGLVESSLE-----EAILDNAADSTP-LRRAMSIFIEARQVYEGENIARLYAGILLACARDERAEGADAARNLLDEMRRSKFPPDKASFGPAASALASAGDWGEAIEVLKEGAAMGALPNNIAYEDIRAAAHQEGQLKVANERLHEIIYPEVD 951
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BLAST of mRNA_P-fluviatile_contig11.1073.1 vs. uniprot
Match: A0A6H5KVR3_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR3_9PHAE)

HSP 1 Score: 710 bits (1832), Expect = 1.550e-237
Identity = 670/1007 (66.53%), Postives = 758/1007 (75.27%), Query Frame = 0 
Query:   45 RNHDVRQLQQCDDRLSRRRHLRACFSLSSTVTGEGSTPTLGRRRSDRVVSENGRTQGQLRFAAMMELSPPVAAKLDVSRVLQELRDEGADINLRTYRGCLAFLAKTGRGKEALMYLQEMEAARVTADGSCLGHVATACARGQNLDSALAVVRGMLSKGHNVSRTFNNIMLAIVNGQALRPRERNGAKFRRTALSSTECDRAVEVLREMQDCGAHPTVFTYNLLIGALARSRRTNDEVLGLLDEMRKAGVPPDSYTYVGVIKGLKGSDRNALMRRVLENAKNELRGAELSAVYSAVISGYAEEGSWQPATDLLEEMFTSKVPRDEYTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGRPNKAWNNDRTSSTFIRPKSAKNPRGEPLGLSPAQTEAYDAGDFALGLMEEMKQDGVRPDVITYGSLMSALSPRGAAGADAVXXXXXXXXXXXXXXXXXXXXXXIRAYGDKGNWQKAEQMLVEMKAEHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRERGQSADPVVXXXXXXXXXXXXXXXXXXXXLSKLVAEMPPVQSLLWGYNATISALGKAKQMEGIKDLLATMKASGLKPDVYTYAAMMRATGINGLWEESLAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDVFCFNALMGGVLKKDQGEKVLELYRTMEDRGVEPDNLTMSTVLRAAEQTGAADWAWLLMEKLREVGGV-SMHVYADAIRACCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETATGGAVGSGPGLRRSLAIFTKAREIFEGENIGRLYTSILTACAREGGEEGLNAARDIVAEMR----------------------------------ASPFPPDKAVFGPAASAFASGGDWEGAIDLLE 1016
            RNH V+QL +   +   RR  RACFSLS+ + G+ + PT+G+        +N RT G++RF AM+ +  P AAK+DV+RV+QELRDEGA+ NLRTYRGCLAFLAK GRG+EALMYL+EME+  V AD +CLGHVATACARGQ LD+ALA+VRGM+SKGH+V+RT+NNIMLAIVNGQA   R  + + FRRTALS+ EC+ AV +L EMQ CGAHPTVFTYNLLI AL RSRR + EVL LLD+MR  G+ PDSYTYVGV+KG++G ++N +MR VLE+AK EL+G +LSAVYSAV+SGYA +GSW+ A+ L++EMF + VPRDEYTY          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F+GRPNKAWNN+R +S+F+RP S                EA DAGDFALGLM+EMK++GV PD+ITYGSLMSALSPRGAAGA   XXXXXXXXXXXXXXXXXXXXXX RAYGDKG+W++AEQMLV M+ +HG XXXXXXXXXXXXXXXXXXXXXXX      MRE G SADPVVXXXXXXXXXXXXXXXXXXXX  KLV+E PP +SL+WGYNA ISALGKAKQMEGIKDLLATMKASGLKPD YTYAAMMRA+GI G WEES  MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  VEPD+LTMS VLRAAEQ GAA+WAWLLMEK+RE GGV +M VYAD IRACC +    XXXXXXXXXXXXXXXXXX                  E A          LRR+++IF    E++EGENIGRLY  I  ACAR+   EG +AAR+++ EMR                                   S FPPDKA FGPAASA AS GDWE AI++L+
Sbjct:   31 RNH-VQQLHRPGQQQGHRR--RACFSLSAVIAGDDAAPTVGKLE---AFGDNARTLGEMRFKAMLGMRRPNAAKVDVTRVMQELRDEGAEFNLRTYRGCLAFLAKGGRGREALMYLEEMESVGVAADNACLGHVATACARGQMLDTALAMVRGMVSKGHSVARTYNNIMLAIVNGQAFTSRTSSRSNFRRTALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALTRSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPNKNVIMRAVLEDAKLELQGVDLSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPNKAWNNNRETSSFMRPTST--------------AEASDAGDFALGLMDEMKREGVEPDIITYGSLMSALSPRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXRAYGDKGDWKRAEQMLVGMQKDHGXXXXXXXXXXXXXXXXXXXXXXXXLETLDKMRECGLSADPVVXXXXXXXXXXXXXXXXXXXXXXKLVSEKPPKRSLMWGYNAAISALGKAKQMEGIKDLLATMKASGLKPDEYTYAAMMRASGIEGSWEESWTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMREEGGVIAMQVYADGIRACCVKTRTTXXXXXXXXXXXXXXXXXXKAEGVESEEGLVESSI--EAAILDNAADSTPLRRAMSIFI---EVYEGENIGRLYAGIFLACARDERAEGADAARNLLDEMRYRGRILKGQRSSVGHQCRAMDIVGIFAFGGMIYRRSKFPPDKASFGPAASALASAGDWEEAIEVLK 1012
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXW0_ECTSI7.360e-26370.49PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KVR3_9PHAE1.550e-23766.53PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 313..333
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 673..881
coord: 335..422
coord: 120..214
coord: 241..317
coord: 462..557
coord: 534..705
coord: 496..614
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 765..789
e-value: 0.092
score: 13.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 797..842
e-value: 4.6E-10
score: 39.5
coord: 691..738
e-value: 1.3E-11
score: 44.5
coord: 259..307
e-value: 6.2E-11
score: 42.3
coord: 335..378
e-value: 1.8E-7
score: 31.2
coord: 626..667
e-value: 2.0E-8
score: 34.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 659..692
e-value: 7.0E-6
score: 23.9
coord: 730..763
e-value: 4.5E-4
score: 18.2
coord: 694..728
e-value: 1.1E-4
score: 20.1
coord: 262..297
e-value: 1.0E-6
score: 26.5
coord: 516..550
e-value: 1.6E-5
score: 22.8
coord: 626..658
e-value: 9.7E-4
score: 17.2
coord: 552..584
e-value: 1.5E-7
score: 29.2
coord: 369..403
e-value: 2.5E-5
score: 22.2
coord: 799..832
e-value: 7.0E-5
score: 20.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 953..990
score: 6.84
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 367..401
score: 11.619
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 622..656
score: 8.418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 991..1025
score: 6.873
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 585..615
score: 7.991
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 762..796
score: 8.846
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 514..549
score: 9.547
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 332..366
score: 8.528
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 477..513
score: 8.111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 171..205
score: 6.675
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 832..866
score: 6.116
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 550..584
score: 11.74
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 797..831
score: 10.709
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 727..761
score: 11.411
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 657..691
score: 11.849
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 136..170
score: 7.41
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 296..326
score: 5.009
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 692..726
score: 11.071
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 260..295
score: 12.025
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 462..616
e-value: 5.0E-8
score: 32.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 334..440
e-value: 1.4E-20
score: 76.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 624..709
e-value: 2.0E-22
score: 81.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 458..623
e-value: 5.1E-43
score: 149.6
coord: 722..922
e-value: 6.6E-36
score: 126.2
coord: 929..1053
e-value: 5.1E-8
score: 34.6
coord: 118..235
e-value: 9.8E-12
score: 46.8
coord: 236..333
e-value: 6.6E-17
score: 63.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 333..822

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:1058130..1072203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1073.1mRNA_P-fluviatile_contig11.1073.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 1058057..1072203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1073.1 ID=prot_P-fluviatile_contig11.1073.1|Name=mRNA_P-fluviatile_contig11.1073.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1059bp
MKDTGVAFANVQPSTFIHFLWTRARPTSSFLLHLQQDTGAGPHLRNHDVR
QLQQCDDRLSRRRHLRACFSLSSTVTGEGSTPTLGRRRSDRVVSENGRTQ
GQLRFAAMMELSPPVAAKLDVSRVLQELRDEGADINLRTYRGCLAFLAKT
GRGKEALMYLQEMEAARVTADGSCLGHVATACARGQNLDSALAVVRGMLS
KGHNVSRTFNNIMLAIVNGQALRPRERNGAKFRRTALSSTECDRAVEVLR
EMQDCGAHPTVFTYNLLIGALARSRRTNDEVLGLLDEMRKAGVPPDSYTY
VGVIKGLKGSDRNALMRRVLENAKNELRGAELSAVYSAVISGYAEEGSWQ
PATDLLEEMFTSKVPRDEYTYCAVMNACKEAGRWREAAAFLPRMKADGVS
PNTIAYNTAIGACAFYGRPNKAWNNDRTSSTFIRPKSAKNPRGEPLGLSP
AQTEAYDAGDFALGLMEEMKQDGVRPDVITYGSLMSALSPRGAAGADAVL
DLFEALQQTDLTPSSITYVSAIRAYGDKGNWQKAEQMLVEMKAEHGLEPN
RFCYSAVVKALAKAGRWKRALQMLDEMRERGQSADPVVYTAAIGACEKYG
QWEKALETLSKLVAEMPPVQSLLWGYNATISALGKAKQMEGIKDLLATMK
ASGLKPDVYTYAAMMRATGINGLWEESLAMLEEMESEGVRPNRVVYNTLI
ASLLKGDQNDKANEILKRMRDGGVPPDVTTYTTIMSGCKRDADWKRAQAL
LSEMQGFGVKPNTRTLTTVLKVYGDAGEVERALALFEECDAAGLDMDVFC
FNALMGGVLKKDQGEKVLELYRTMEDRGVEPDNLTMSTVLRAAEQTGAAD
WAWLLMEKLREVGGVSMHVYADAIRACCAQETKKEEGGAREGVVDGGQEG
GGGGGGVEEAGGKEAAGGGGETATGGAVGSGPGLRRSLAIFTKAREIFEG
ENIGRLYTSILTACAREGGEEGLNAARDIVAEMRASPFPPDKAVFGPAAS
AFASGGDWEGAIDLLEEGAAIGALPNSMASEDVRAMAYQKGQLMAANTRL
NSIVYLEMD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf