mRNA_P-fluviatile_contig11.1073.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1073.1 vs. uniprot
Match: D7FXW0_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW0_ECTSI) HSP 1 Score: 773 bits (1996), Expect = 1.600e-262 Identity = 676/959 (70.49%), Postives = 766/959 (79.87%), Query Frame = 2
Query: 380 LRFAAMMELSPPVAAKLDVSRVLQELRDEGADINLRTYRGCLAFLAKTGRGKEALMYLQEMEAARVTADGSCLGHVATACARGQNLDSALAVVRGMLSKGHNVSRTFNNIMLAIVNGQALRPRERNG-AKFRRTALSSTECDRAVEVLREMQDCGAHPTVFTYNLLIGALARSRRTNDEVLGLLDEMRKAGVPPDSYTYVGVIKGLKGSDRNALMRRVLENAKNELRGAELSAVYSAVISGYAEEGSWQPATDLLEEMFTSKVPRDEYTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGRPNKAWNNDRTSSTFIRPKSAKNPRGEPLGLSPAQTEAYDAGDFALGLMEEMKQDGVRPDVITYGSLMSALSPRGAAGADAVXXXXXXXXXXXXXXXXXXXXXXIRAYGDKGNWQKAEQMLVEMKAEHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRERGQSADPVVXXXXXXXXXXXXXXXXXXXXLSKLVAEMPPVQSLLWGYNATISALGKAKQMEGIKDLLATMKASGLKPDVYTYAAMMRATGINGLWEESLAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDVFCFNALMGGVLKKDQGEKVLELYRTMEDRGVEPDNLTMSTVLRAAEQTGAADWAWLLMEKLREVGGV-SMHVYADAIRACCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETATGGAVGSGPGLRRSLAIFTKAREIFEGENIGRLYTSILTACAREGGEEGLNAARDIVAEMRASPFPPDKAVFGPAASAFASGGDWEGAIDLLEEGAAIGALPNSMASEDVRAMAYQKGQLMAANTRLNSIVYLEMD 3250
+RF AM+ + P AAK+DV+RV+QELRDEGA+ NLRTYRGCLAFLAK GRG+EALMYL+EME+A V AD +CLGHVATACARGQ LD+ALA+VRGM+SKGH+V+RT+NNIMLAIVNGQA R + + FRRTALS+ EC+ AV +L EMQ CGAHPTVFTYNLLI ALARSRR + EVL LLD+MR G+ PDSYTYVGV+KG++G +NA+MR VLE+AK EL G +LSAVYSAV+SGYA +GSW+ A+ L++EMF + VPRDEYTY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F+GRPNKAWNN+R +S+F+RP S + +G GLSPAQ EA DAGDFALGLMEEMK++GV PD+ITYGSLMSALSPRG AGAD XXXXXXXXXXXXXXXXXXXXXX RAYGDKG+W++AEQMLV M+ EH XXXXXXXXXXXXXXXXXXXXXXX MRE G SADPV XXXXXXXXXXXXXXXXXXXX SKLV+E PP++SL+WGYNA ISALGKAKQMEGIKDL+ATMKASGLKPD YTYAAMMRA+GI+G WEES +M XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEPD+LTMS VLRAAEQ GAA+WAWLLMEK+RE GGV +M VYAD IRACC + XXXXX XXXX E A S P LRR+++IF +AR+++EGENI RLY IL ACAR+ EG +AAR+++ EMR S FPPDKA FGPAASA AS GDW AI++L+EGAA+GALPN++A ED+RA A+Q+GQL AN RL+ I+Y E+D
Sbjct: 1 MRFKAMLGMRRPNAAKVDVTRVMQELRDEGAEFNLRTYRGCLAFLAKGGRGREALMYLEEMESAGVAADNACLGHVATACARGQMLDTALAMVRGMVSKGHSVARTYNNIMLAIVNGQAFTSRTSSSRSSFRRTALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALARSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVLEDAKLELEGLDLSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPNKAWNNNRETSSFLRPTSTRENKGR--GLSPAQAEASDAGDFALGLMEEMKREGVEPDIITYGSLMSALSPRGLAGADXXXXXXXXXXXXXXXXXXXXXXXXXRAYGDKGDWERAEQMLVGMQKEHXXXXXXXXXXXXXXXXXXXXXXXXXLETLDEMRECGLSADPVXXXXXXXXXXXXXXXXXXXXXXSKLVSEKPPMRSLMWGYNAAISALGKAKQMEGIKDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMREEGGVIAMQVYADGIRACCVKTRTIADDDXXXXXGXXXXNGEGVESEEGLVESSLE-----EAILDNAADSTP-LRRAMSIFIEARQVYEGENIARLYAGILLACARDERAEGADAARNLLDEMRRSKFPPDKASFGPAASALASAGDWGEAIEVLKEGAAMGALPNNIAYEDIRAAAHQEGQLKVANERLHEIIYPEVD 951
BLAST of mRNA_P-fluviatile_contig11.1073.1 vs. uniprot
Match: A0A6H5KVR3_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR3_9PHAE) HSP 1 Score: 710 bits (1832), Expect = 3.280e-237 Identity = 670/1007 (66.53%), Postives = 758/1007 (75.27%), Query Frame = 2
Query: 206 RNHDVRQLQQCDDRLSRRRHLRACFSLSSTVTGEGSTPTLGRRRSDRVVSENGRTQGQLRFAAMMELSPPVAAKLDVSRVLQELRDEGADINLRTYRGCLAFLAKTGRGKEALMYLQEMEAARVTADGSCLGHVATACARGQNLDSALAVVRGMLSKGHNVSRTFNNIMLAIVNGQALRPRERNGAKFRRTALSSTECDRAVEVLREMQDCGAHPTVFTYNLLIGALARSRRTNDEVLGLLDEMRKAGVPPDSYTYVGVIKGLKGSDRNALMRRVLENAKNELRGAELSAVYSAVISGYAEEGSWQPATDLLEEMFTSKVPRDEYTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGRPNKAWNNDRTSSTFIRPKSAKNPRGEPLGLSPAQTEAYDAGDFALGLMEEMKQDGVRPDVITYGSLMSALSPRGAAGADAVXXXXXXXXXXXXXXXXXXXXXXIRAYGDKGNWQKAEQMLVEMKAEHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRERGQSADPVVXXXXXXXXXXXXXXXXXXXXLSKLVAEMPPVQSLLWGYNATISALGKAKQMEGIKDLLATMKASGLKPDVYTYAAMMRATGINGLWEESLAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDVFCFNALMGGVLKKDQGEKVLELYRTMEDRGVEPDNLTMSTVLRAAEQTGAADWAWLLMEKLREVGGV-SMHVYADAIRACCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETATGGAVGSGPGLRRSLAIFTKAREIFEGENIGRLYTSILTACAREGGEEGLNAARDIVAEMR----------------------------------ASPFPPDKAVFGPAASAFASGGDWEGAIDLLE 3121
RNH V+QL + + RR RACFSLS+ + G+ + PT+G+ +N RT G++RF AM+ + P AAK+DV+RV+QELRDEGA+ NLRTYRGCLAFLAK GRG+EALMYL+EME+ V AD +CLGHVATACARGQ LD+ALA+VRGM+SKGH+V+RT+NNIMLAIVNGQA R + + FRRTALS+ EC+ AV +L EMQ CGAHPTVFTYNLLI AL RSRR + EVL LLD+MR G+ PDSYTYVGV+KG++G ++N +MR VLE+AK EL+G +LSAVYSAV+SGYA +GSW+ A+ L++EMF + VPRDEYTY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F+GRPNKAWNN+R +S+F+RP S EA DAGDFALGLM+EMK++GV PD+ITYGSLMSALSPRGAAGA XXXXXXXXXXXXXXXXXXXXXX RAYGDKG+W++AEQMLV M+ +HG XXXXXXXXXXXXXXXXXXXXXXX MRE G SADPVVXXXXXXXXXXXXXXXXXXXX KLV+E PP +SL+WGYNA ISALGKAKQMEGIKDLLATMKASGLKPD YTYAAMMRA+GI G WEES MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEPD+LTMS VLRAAEQ GAA+WAWLLMEK+RE GGV +M VYAD IRACC + XXXXXXXXXXXXXXXXXX E A LRR+++IF E++EGENIGRLY I ACAR+ EG +AAR+++ EMR S FPPDKA FGPAASA AS GDWE AI++L+
Sbjct: 31 RNH-VQQLHRPGQQQGHRR--RACFSLSAVIAGDDAAPTVGKLE---AFGDNARTLGEMRFKAMLGMRRPNAAKVDVTRVMQELRDEGAEFNLRTYRGCLAFLAKGGRGREALMYLEEMESVGVAADNACLGHVATACARGQMLDTALAMVRGMVSKGHSVARTYNNIMLAIVNGQAFTSRTSSRSNFRRTALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALTRSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPNKNVIMRAVLEDAKLELQGVDLSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPNKAWNNNRETSSFMRPTST--------------AEASDAGDFALGLMDEMKREGVEPDIITYGSLMSALSPRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXRAYGDKGDWKRAEQMLVGMQKDHGXXXXXXXXXXXXXXXXXXXXXXXXLETLDKMRECGLSADPVVXXXXXXXXXXXXXXXXXXXXXXKLVSEKPPKRSLMWGYNAAISALGKAKQMEGIKDLLATMKASGLKPDEYTYAAMMRASGIEGSWEESWTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMREEGGVIAMQVYADGIRACCVKTRTTXXXXXXXXXXXXXXXXXXKAEGVESEEGLVESSI--EAAILDNAADSTPLRRAMSIFI---EVYEGENIGRLYAGIFLACARDERAEGADAARNLLDEMRYRGRILKGQRSSVGHQCRAMDIVGIFAFGGMIYRRSKFPPDKASFGPAASALASAGDWEEAIEVLK 1012 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1073.1 >prot_P-fluviatile_contig11.1073.1 ID=prot_P-fluviatile_contig11.1073.1|Name=mRNA_P-fluviatile_contig11.1073.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1059bp MKDTGVAFANVQPSTFIHFLWTRARPTSSFLLHLQQDTGAGPHLRNHDVRback to top mRNA from alignment at P-fluviatile_contig11:1058057..1072203+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1073.1 ID=mRNA_P-fluviatile_contig11.1073.1|Name=mRNA_P-fluviatile_contig11.1073.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14147bp|location=Sequence derived from alignment at P-fluviatile_contig11:1058057..1072203+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:1058057..1072203+ >mRNA_P-fluviatile_contig11.1073.1 ID=mRNA_P-fluviatile_contig11.1073.1|Name=mRNA_P-fluviatile_contig11.1073.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6354bp|location=Sequence derived from alignment at P-fluviatile_contig11:1058057..1072203+ (Porterinema fluviatile SAG_2381)back to top |