mRNA_P-fluviatile_contig11.1023.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A6H5JR03_9PHAE (zf-CHCC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR03_9PHAE) HSP 1 Score: 171 bits (434), Expect = 5.830e-48 Identity = 92/134 (68.66%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 1 MTVRVSAKKIIGQAAGALVSRGGASAVRSSSAGAAMTALRPGVESCSPLPNQQQCRTVFSKEKSKSVYEYGAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLNVPDGGPRACTYCGIRYQMKSH 402
M RVSAKK + AG+ RGGA AVR +SAG A RP +P T FSKE+SKSVYE+GAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDY+QL PDGGPRAC YCGI YQMK+H
Sbjct: 1 MAARVSAKKALDLIAGSFAPRGGAGAVRPASAGLTTAASRP-FSRLAPT-------TTFSKERSKSVYEHGAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYIQLASPDGGPRACQYCGIMYQMKTH 126
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A6G0WCA7_9STRA (zf-CHCC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCA7_9STRA) HSP 1 Score: 100 bits (250), Expect = 6.110e-22 Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 106 MTALRPGVESCSPLPN----QQQCRTVFSKEKSKSVYE-YGAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLNVPDGGPRACTYCGIRYQMKSH 402
+ ALR + S + +P +QQ + K+ YE HRSDAE RIA+VPVV VD VA+CDGGGGALGHPL+Y+QLN P+ C YCG+RY+MK H
Sbjct: 7 LRALRAPMRSAAVIPRSAAFRQQVARFATIYDLKTPYEDINRHRSDAELRIAKVPVVEVDTDVAVCDGGGGALGHPLEYIQLNTVSKEPQTCKYCGLRYKMKHH 110
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: W4FPE3_9STRA (zf-CHCC domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPE3_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 6.040e-20 Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 217 HRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLNVPDGGPRACTYCGIRYQMKSH 402
HRSDAE RIA+VPVV VD VA+CDGGGGALGHP++Y+ LN+ P+ C YCG+RY+ K H
Sbjct: 54 HRSDAELRIAQVPVVEVDSDVAVCDGGGGALGHPVEYIALNIVSDKPQTCKYCGLRYKQKHH 115
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A485KN93_9STRA (Aste57867_9463 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN93_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 8.750e-20 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 217 HRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLNVPDGGPRACTYCGIRYQMKSH 402
HRSDAE RIA+VPV+ VD A+CDGGGGALGHPL+Y+ LN+ P+ C YCG+R++MK H
Sbjct: 56 HRSDAEIRIAQVPVIEVDSDTAVCDGGGGALGHPLEYIALNIVSDEPQTCKYCGLRFKMKHH 117
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A662WUI1_9STRA (zf-CHCC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUI1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 9.840e-20 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 154 QQQCRTVFSKEKSKSVYEY-------GAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLN-VPDGGPRACTYCGIRYQMKS 399
+QQ R FS ++Y++ HRSDAE RIA+VPVV V G VA+CDGGGGALGHPL+Y+QL+ V P+ C YCG+RY+MK+
Sbjct: 22 RQQSRAAFS-----TIYDHKTPFEDVNRHRSDAELRIAKVPVVEVAGSVAVCDGGGGALGHPLEYIQLDTVKHNTPQTCKYCGVRYKMKA 106
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A024TS26_9STRA (zf-CHCC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TS26_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.910e-19 Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 217 HRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLNVPDGGPRACTYCGIRYQMKSH*AH 411
HRSDAE IA+VPVV VD VA+CDGGGGALGHPL+Y+ LN P+ C YCG+RY+ K H H
Sbjct: 53 HRSDAEILIAQVPVVEVDSDVAVCDGGGGALGHPLEYIALNTVSDKPQTCKYCGLRYKQKPHHHH 117
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A8K1CA36_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA36_PYTOL) HSP 1 Score: 91.3 bits (225), Expect = 2.080e-18 Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 217 HRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLN-VPDGGPRACTYCGIRYQMKS 399
HRSDAE RIA VPVV VDG VA+CDGGGGALGHP++Y+QL+ V P+ C YCG+RY+MK+
Sbjct: 53 HRSDAELRIAAVPVVEVDGHVAVCDGGGGALGHPVEYIQLDTVKHFEPQTCKYCGLRYKMKA 114
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A4D9CSN1_9STRA (zf-CHCC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSN1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.850e-18 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 190 SKSVYEYGAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLNVPDGGPRACTYCGIRYQMKSH 402
S S Y +GAHRS+AE +A+ PV V G VALCDGGGGA+GHP++Y+QLN C YCG++Y+M H
Sbjct: 50 SNSPYTHGAHRSNAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEVATCKYCGLQYKMAHH 120
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: F0X2A7_9STRA (Uncharacterized protein AlNc14C931G12647 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X2A7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.010e-18 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 217 HRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLNVPDG-GPRACTYCGIRYQMK 396
HRSDAE RIA+VPVV V+G +A+CDGGGGALGHPL+Y+QL+ + P+ C YCGIRY+MK
Sbjct: 55 HRSDAEIRIAQVPVVEVEGNLAVCDGGGGALGHPLEYIQLDTVERYEPQTCKYCGIRYKMK 115
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Match: A0A2D4BTY1_PYTIN (zf-CHCC domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTY1_PYTIN) HSP 1 Score: 90.9 bits (224), Expect = 3.650e-18 Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 190 SKSVYE-YGAHRSDAEARIAEVPVVMVDGPVALCDGGGGALGHPLDYVQLN-VPDGGPRACTYCGIRYQMK 396
+K YE HRSDAE RIA+VP+V V+G VA+CDGGGGALGHPL+Y+QL+ V P+ C YCGIRY+ K
Sbjct: 51 NKMPYEDVNRHRSDAEQRIAQVPIVDVEGDVAVCDGGGGALGHPLEYIQLDTVRHNEPQTCKYCGIRYRKK 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1023.1 >prot_P-fluviatile_contig11.1023.1 ID=prot_P-fluviatile_contig11.1023.1|Name=mRNA_P-fluviatile_contig11.1023.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=135bp MTVRVSAKKIIGQAAGALVSRGGASAVRSSSAGAAMTALRPGVESCSPLPback to top mRNA from alignment at P-fluviatile_contig11:482701..485317- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1023.1 ID=mRNA_P-fluviatile_contig11.1023.1|Name=mRNA_P-fluviatile_contig11.1023.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2617bp|location=Sequence derived from alignment at P-fluviatile_contig11:482701..485317- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:482701..485317- >mRNA_P-fluviatile_contig11.1023.1 ID=mRNA_P-fluviatile_contig11.1023.1|Name=mRNA_P-fluviatile_contig11.1023.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=810bp|location=Sequence derived from alignment at P-fluviatile_contig11:482701..485317- (Porterinema fluviatile SAG_2381)back to top |