mRNA_P-fluviatile_contig11.1012.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1012.1 vs. uniprot
Match: A0A6H5K070_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K070_9PHAE) HSP 1 Score: 295 bits (756), Expect = 1.030e-90 Identity = 228/462 (49.35%), Postives = 272/462 (58.87%), Query Frame = 3
Query: 126 LEWGRRYQEEELLSLRSGLEEVSREVEAETQQLRDREDMIRAIRHEQQQDRIKIQTLLALSQPIAPDITVVLQALAPGAFPPPLPRPPAGRGGDRLGRR--PSLSRDGVRGRGSLSPSQRAAAAARADESQIAGRPEPQQMRQQSNGDDDXXXXXXXXXXXXXXKPGRRSAGDTSDGGYGSSSDEGRSFPAEEDDTDQEGSDDGGVGGGSGDDYDNVQPRSQEGEQTGGGVSYGLRPWRARTTETREDGEEEKGRASPMGRSXXXXXXXXXXXXXXXXXXXXXRGGARKDAGASRLRCTRGYQEHLERRLELTQRHSRDLDRLDRAYHETLERDRQEREIQIQVQKENVAFLVQSLRRRTAEVEQRVAKATEDYLRLRHGAKEAQGASVAEQKECAEAKRKSRAAVARLCAAAEAEVQAIKQEGRRRLDDCTVGLREDLGAAEATLQRERAFHAAIKQRFEE 1505
L+WGRRYQEEELL+LR + EVS EVEAE +QLRDRE++IRAIR EQ+QDRIKIQTLLALSQPI PDITVV QALAP A PPPL PP RG L R P +R V S SPS+R+ AAA A + AGR E + R RR D G GS G GG + + + + E+ GGVSYGL P R T+E R G GR G RK A+RL CTRGYQ+HLERRLEL +RH R+L+RL+ +YHETL RD+QEREI +VQ++N A +V++L RR AEVE+R++ AT+DYLRLRH AKEA S EQ++C EA+ KS+A V L AAAEA+V+A K EG RRL+DCT GLRE LG AE LQ ER+ HAAIKQRFEE
Sbjct: 13 LQWGRRYQEEELLALRLEVGEVSGEVEAEIKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPDACPPPL--PPPSRGARPLDRSYVPQNNRRAV---ASNSPSRRSVAAAAATAGRNAGRGEQRPRR-------------------------RRYLND----GIGSD----------------------GCSGGEQINMEGERNAGRGEEEATGGVSYGLYPGRRWTSE-RVGGNGGHADRRRGGREGGVPGSRRRRRPRSGDGGGSL--GTRKSREANRL-CTRGYQQHLERRLELNERHLRELERLEGSYHETLTRDKQEREIHARVQRDNAARVVEALERRNAEVEKRLSGATDDYLRLRHKAKEAHAVSAEEQRQCREAREKSQAEVRSLLAAAEAKVEATKVEGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEE 414
BLAST of mRNA_P-fluviatile_contig11.1012.1 vs. uniprot
Match: D8LLH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH3_ECTSI) HSP 1 Score: 276 bits (707), Expect = 9.450e-85 Identity = 216/494 (43.72%), Postives = 251/494 (50.81%), Query Frame = 3
Query: 24 MECYQETMRAIERERINFLNKIDLVQPSFEEQHQLEWGRRYQEEELLSLRSGLEEVSREVEAETQQLRDREDMIRAIRHEQQQDRIKIQTLLALSQPIAPDITVVLQALAPGAFPPPLPRPPAGRGGDRLGRRPSLSRDGVRGRGSLSPSQRAAAAARADESQIAGRPEPQQMRQQSNGDDDXXXXXXXXXXXXXXKPGRRSAGDTSDGGYGSSSDEGRSFPAEEDDTDQEGSDDGGVGGGSGDDYDNVQPRSQEGEQTGGGVSYGLRPWRARTTETREDGEEEKGRASPMGRSXXXXXXXXXXXXXXXXXXXXXRGGARKDAGASRLRCTRGYQEHLERRLELTQRHSRDLDRLDRAYHETLERDRQEREIQIQVQKENVAFLVQSLRRRTAEVEQRVAKATEDYLRLRHGAKEAQGASVAEQKECAEAKRKSRAAVARLCAAAEAEVQAIKQEGRRRLDDCTVGLREDLGAAEATLQRERAFHAAIKQRFEE 1505
MECYQE MRAIERERIN LNKIDLVQPSFEEQHQLEWGRRYQEEELL+LR + EVSREVEAET+QLRDRE++IRAIR EQ+QDRIKIQTLLALSQPI PDITVV QALAP A PPPL PP RG L R S+ ++ R S SPS+R+ AAA G S G RG RH R+L+RL+ ++HETL RD+QERE+ +VQK+N A ++++L RRTAEVE+R++ AT+DYLRLRH AKEA S Q++C EA+ KS+A V L AAAEAEV+AIK EG RRL+DCT GLRE LG AE LQ ER+ HAAIKQRFEE
Sbjct: 1 MECYQEAMRAIERERINVLNKIDLVQPSFEEQHQLEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPDACPPPL--PPPSRGSRPLDRS-SVPQNNRRAVTSNSPSRRSVAAAAT-----------------------------------------------------------------------------------------------------AGTSAG-----------------------------------------------------------------RG-------------RHLRELERLEGSFHETLTRDKQEREMHARVQKDNAARVMEALGRRTAEVEKRLSGATDDYLRLRHKAKEAHAVSAEGQRQCGEAREKSQAEVRSLVAAAEAEVEAIKAEGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEE 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1012.1 >prot_P-fluviatile_contig11.1012.1 ID=prot_P-fluviatile_contig11.1012.1|Name=mRNA_P-fluviatile_contig11.1012.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=547bp MECYQETMRAIERERINFLNKIDLVQPSFEEQHQLEWGRRYQEEELLSLRback to top mRNA from alignment at P-fluviatile_contig11:385375..391792+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1012.1 ID=mRNA_P-fluviatile_contig11.1012.1|Name=mRNA_P-fluviatile_contig11.1012.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6418bp|location=Sequence derived from alignment at P-fluviatile_contig11:385375..391792+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:385375..391792+ >mRNA_P-fluviatile_contig11.1012.1 ID=mRNA_P-fluviatile_contig11.1012.1|Name=mRNA_P-fluviatile_contig11.1012.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3282bp|location=Sequence derived from alignment at P-fluviatile_contig11:385375..391792+ (Porterinema fluviatile SAG_2381)back to top |