prot_P-fluviatile_contig11.995.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig11.995.1
Unique Name	prot_P-fluviatile_contig11.995.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	221

Homology

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BLAST of mRNA_P-fluviatile_contig11.995.1 vs. uniprot
Match: D8LGG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG6_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 2.190e-75
Identity = 134/178 (75.28%), Postives = 148/178 (83.15%), Query Frame = 0

Query:   44 VGRIEAEIELEQLRREEDGSAMTARDQVRTVTAGWLVGVVLGXXXXXXXXCLFSPALGFMLVLPFVSGGVIGGLVYSQLRDKMRSLRRDPLQHQLHHQQQPGEGDCCFKDKQEFLRQLQGRSDPSATYLHLSADAGALPSRSFLRTIALGAARVLVRSALDVTTAAAYAMLGIRSNGG 221
            +GRI+AEIELEQL+REE GSAMTAR+QVRTVTAGWLVGV+LG XXXXXXXCLFSPALGFM+VLPFVSGGVIGGLVYSQLRDK+RSL R P+  +  HQQ  G      +DKQEFLRQLQGRSDPSATYLH+  D   LPS SFLR +ALGA  +LVRSALDVT AAA AMLG+   GG
Sbjct:    1 MGRIQAEIELEQLQREESGSAMTARNQVRTVTAGWLVGVILGWXXXXXXXCLFSPALGFMMVLPFVSGGVIGGLVYSQLRDKIRSLSRRPMPMEQEHQQPRGRSRS--EDKQEFLRQLQGRSDPSATYLHMGTDDSTLPSGSFLRRVALGATHILVRSALDVTAAAACAMLGLGRGGG 176

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig11.995.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig11.995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LGG6_ECTSI	2.190e-75	75.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 94..98
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..73
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 74..93
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 99..120
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 121..221
None	No IPR available	TMHMM	TMhelix		coord: 100..122
None	No IPR available	TMHMM	TMhelix		coord: 74..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig11	contig	P-fluviatile_contig11:233666..241347 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig11.995.1	mRNA_P-fluviatile_contig11.995.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig11 233666..241347 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig11.995.1 ID=prot_P-fluviatile_contig11.995.1|Name=mRNA_P-fluviatile_contig11.995.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp
MDRSLEELELTAQRDAAVSLCKGLQEKIRVQAEEYEARTGAAEVGRIEAE
IELEQLRREEDGSAMTARDQVRTVTAGWLVGVVLGWSAGFVLGCLFSPAL
GFMLVLPFVSGGVIGGLVYSQLRDKMRSLRRDPLQHQLHHQQQPGEGDCC
FKDKQEFLRQLQGRSDPSATYLHLSADAGALPSRSFLRTIALGAARVLVR
SALDVTTAAAYAMLGIRSNGG