mRNA_P-fluviatile_contig11.989.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.989.1 vs. uniprot
Match: D8LGG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG0_ECTSI) HSP 1 Score: 341 bits (875), Expect = 6.260e-115 Identity = 212/303 (69.97%), Postives = 230/303 (75.91%), Query Frame = 1
Query: 1 KSQIKWAIMHPGEEMPSPRATKRFETTSFAGTECVAARRGEVPNRATMIKELEERKLNNTRASVAFGSAKIVYESDAMSRQKDILGAPPRREDEKRNKELKQALTRTNFTFGDEPVVYERTSTLPDPTGHLAEYTGVLNTXXXXXXXXXXXXXXXXXXXXRTMATDQMDLQAPQGEDRGAQLEKNRQLKASEVALTRTHFKFGEEEMDYTTDHKMGFQYDPEKVKHLGNKGLAKEVKAEXXXXXXXXXXXXXXXXXXSMRTQAPSGGTTAATLERQAQTEKNKALKKQLQATHYEIGTDEDYM 909
K +IKWAIM+ GEEMPSPRATKRFETTS AGTE VA+RRGEVP+R TMI+ELE+RKL NT+ASVAFGSAKI+YESDAMSRQKDILGAPPR EDEKRNKELKQALTRT+FTFG+EP+VYERTSTLPDPTGHL +YTGVLNTXXXXXXXXXXXXXXXXXXXXRTMATDQMDLQ PQGEDRG QLEKNRQLK VK GN+GLAKEVKA+ +MRTQ SGG A ERQAQ +KN+ALKKQLQ THYEIGTD+DYM
Sbjct: 4 KHKIKWAIMNAGEEMPSPRATKRFETTSLAGTEYVASRRGEVPDRGTMIRELEQRKLRNTQASVAFGSAKILYESDAMSRQKDILGAPPRGEDEKRNKELKQALTRTHFTFGEEPMVYERTSTLPDPTGHLDDYTGVLNTXXXXXXXXXXXXXXXXXXXXRTMATDQMDLQVPQGEDRGVQLEKNRQLK----------------------------------VKLAGNRGLAKEVKADLSRTHFTLGNHKFDWQTDAMRTQRASGGMVATAEERQAQIDKNRALKKQLQTTHYEIGTDDDYM 272
BLAST of mRNA_P-fluviatile_contig11.989.1 vs. uniprot
Match: A0A835YW84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW84_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.640e-33 Identity = 109/308 (35.39%), Postives = 135/308 (43.83%), Query Frame = 1
Query: 142 MIKELEERKLNNTRASVAFGSAKIVYESDAMSR-------------------QKDILGAPPRREDEKRNKELKQALTRTNFTFGDEPVVYERTSTLPDPTGHLAEYTGVLNTXXXXXXXXXXXXXXXXXXXXR-------------------------TMATDQMDLQAPQG---EDRGAQLEKNRQLKASEVALTRTHFKFGEEEMDYTTDHKMGFQYDPEKVKHLGNKGLAKEVKAEXXXXXXXXXXXXXXXXXXSMRT-----QAPSGGTTAATLERQAQTEKNKALKKQLQATHYEIGTDEDYM 909
M EL RKLNNTR S+A GSA VYE+DA + QKDIL + D + N+ LK LTRT F+ GDE V Y+R S LPDPTG L E+TGVLN T A + M G D A L+ NR LK VALTRT+ FG+E +Y +D+K GF+YD ++VK G L+KEVK + + R QA G +R E N+ LK+ LQ T+Y IGTD DYM
Sbjct: 1 MASELHRRKLNNTRTSIALGSAPTVYETDAQGQLPAPMYATLHCGRYESQAHQKDILSSHSAGADREHNRLLKAQLTRTTFSLGDERVDYQRVSALPDPTGRLHEFTGVLNAEVKEMMKRSNMYFGEPGGNFAKGHVLRNPALLLRLPLPGNAAPSYDTAAHEGMQAVGASGVAAADMQATLQHNRDLK---VALTRTNLNFGDEVPEYVSDYKRGFKYDADEVKSAGRACLSKEVKDDLRRSHFKFGTDPVVWETDARRNMRQAEQAEHSGPEEVARQR----EHNRLLKQSLQRTNYAIGTDADYM 301
BLAST of mRNA_P-fluviatile_contig11.989.1 vs. uniprot
Match: A0A7S2FEP3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEP3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.890e-14 Identity = 54/109 (49.54%), Postives = 61/109 (55.96%), Query Frame = 1
Query: 43 MPSPRATKRFETTSFAGTECVAARRGEVPNRATMIKELEERKLNNTRASVAFGSAKIVYESDAMSRQKDILGAPPRREDEKRNKELKQALTRTNFTFG-DEPVVYERTS 366
MPS KRF TT + E VA RR EV NR M L RKL NT+ S+ FGS +VYESDAM RQKDILG D K KELK L ++N G D Y T+
Sbjct: 1 MPS----KRFTTTLNSSLEAVAKRRDEVENRQQMSASLRGRKLANTQTSIVFGSDSVVYESDAMRRQKDILGNKSAGADAKACKELKLGLQKSNIAIGTDSDTSYSTTT 105 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.989.1 >prot_P-fluviatile_contig11.989.1 ID=prot_P-fluviatile_contig11.989.1|Name=mRNA_P-fluviatile_contig11.989.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=296bp MHPGEEMPSPRATKRFETTSFAGTECVAARRGEVPNRATMIKELEERKLNback to top mRNA from alignment at P-fluviatile_contig11:190371..193838- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.989.1 ID=mRNA_P-fluviatile_contig11.989.1|Name=mRNA_P-fluviatile_contig11.989.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3468bp|location=Sequence derived from alignment at P-fluviatile_contig11:190371..193838- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:190371..193838- >mRNA_P-fluviatile_contig11.989.1 ID=mRNA_P-fluviatile_contig11.989.1|Name=mRNA_P-fluviatile_contig11.989.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1776bp|location=Sequence derived from alignment at P-fluviatile_contig11:190371..193838- (Porterinema fluviatile SAG_2381)back to top |