mRNA_P-fluviatile_contig11.980.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.980.1
Unique NamemRNA_P-fluviatile_contig11.980.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:45129..49741 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size166
Cds size141
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.980.1prot_P-fluviatile_contig11.980.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 45129..49716 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815424.5665762-CDS-P-fluviatile_contig11:45128..452111622815424.5665762-CDS-P-fluviatile_contig11:45128..45211Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 45129..45211 +
1693561802.864804-CDS-P-fluviatile_contig11:45128..452111693561802.864804-CDS-P-fluviatile_contig11:45128..45211Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 45129..45211 +
1622815424.5777042-CDS-P-fluviatile_contig11:49658..497161622815424.5777042-CDS-P-fluviatile_contig11:49658..49716Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 49659..49716 +
1693561803.9270647-CDS-P-fluviatile_contig11:49658..497161693561803.9270647-CDS-P-fluviatile_contig11:49658..49716Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 49659..49716 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815424.5903003-UTR-P-fluviatile_contig11:49716..497411622815424.5903003-UTR-P-fluviatile_contig11:49716..49741Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 49717..49741 +
1693561803.9404492-UTR-P-fluviatile_contig11:49716..497411693561803.9404492-UTR-P-fluviatile_contig11:49716..49741Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 49717..49741 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.980.1

>prot_P-fluviatile_contig11.980.1 ID=prot_P-fluviatile_contig11.980.1|Name=mRNA_P-fluviatile_contig11.980.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=47bp
LEGAKVTLGWTYPQRKSHAGEGYLGKKRPRYDGPTASSFGRVELAA*
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mRNA from alignment at P-fluviatile_contig11:45129..49741+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.980.1 ID=mRNA_P-fluviatile_contig11.980.1|Name=mRNA_P-fluviatile_contig11.980.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4613bp|location=Sequence derived from alignment at P-fluviatile_contig11:45129..49741+ (Porterinema fluviatile SAG_2381)
CTGGAAGGCGCGAAAGTCACCCTGGGGTGGACTTACCCCCAACGTAAATC
CCACGCAGGCGAAGGATATCTGGGCAAGAAACGGTGAGTGAGGAAGAAAC
AGACAGCAGACAGAGAGAAAGAGACAGAGAGCGGGTCAGAGACACAGAGA
CATGGATACATAGAGAGAGAGGGCGAGAGAGAGAGAGAGAGAGAGAGAGA
CAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACAAACAGAGACAGA
GAGAGAGAGCGGAAAAGGAGCGCACCCACCGCGAGGAATTTGCTCCACAG
ATCTCCTGTTGCTCTCCTGTAGAAACAAAAAATGGTAGGCAGCCTAAAAT
GTGCTTGAAAGAGGACAAAAATGCAGTTGTTGTGGACAAGCCCCGGTCGT
GGGTTGTGCGCATAGTGTATGACCGTTAAAGGAGTCTTCATGTATGTGCA
GGAGTGTGCGAGAGAGAGTGTATCTTCTTCCCAGTCAGCCTGTTTTTTTC
TTGTCTCGTTCCACCCGAATTTGGAAGCACTTCCACTGCGTTTTGGGATT
GTTTATATTTTCACGTGCCACGTCGACACACGGCGCTTTCCGCAGTATCT
TTTAAGCAGACGGAGTTAGCCCGGTGGTGGTTGATAACGGAGTAGGAGAA
ACACACACCACCGATAGGTATCGCGTCAAGTACCGGGTGACGTCTGCAGG
TTTTTTCGTCCACAGCAGGAGGCCTTCATTGTATTATTACACATAGACTA
CTCATCAATGGGCAGGCATTCAAAAATATCCCAAACAAGGATGGTCTACA
AGCTCATCAATATCGGGCCCGAGCGAAAAGTCTGGCGTCATCAATCAGAC
CAATCAGACCAATCAGTCAATCACGGGGAATTTGAATTTTGCATGCCGTA
GTCGTGAGACCATTGACCTCGCATCCCTACGAAGCCGGGACGGAGCACGC
CGGGTTTTCGCCGCACCAGGCTCGCATTCACCAAGCGCGAAGCGCCGTAG
TTTTTTCGGCGAGTCGCATGAAGAGCTGCATCGTACGAAGATTGTTCCGC
TCAAGCGTACTTAGTTTGGACTAGTCTTGCATCGTCTAGTCTATAGGTTA
CAGCCTCGGATGGGTTCGTTGTGTTTTCTGGTCCTCCCCACTTTAAGAGA
CAGTCATGGGTTCGTACTATGCAACTGCCTCGTAATAGGTGCGTGACTAT
TTTACACTACGTGGTACGATCATCCTCAGTTGTGCGGCGTTGGGTTATCC
ACCCGCACAACATGATCTACTCGAGCATCACAGTTACCCAAAAAAGGCGC
AATACGGGAAAAAAAAGCGGAAACCTGGTGGCCCAGCTCACGTCATGAAG
TGTCGTGTTTTAAAGCTTCGTTGCCAACTCGAAGCCAAGCCAAGCCAACC
CCGTTCGCGCCATCCGCCCGGTGCATCGCTTTCGAGAGCGTTAGGGGTGG
CGGGGGCGGGGGGGGAGAGAGAGAGGGGGAAAGCAAGAACGGAGACGCGG
GTTAGCAGAGGTGGGTCTGTTGCATCTCAGTCACACGCGCGCGCTCCGCG
GATCCCTTGGATCCCTGCACGCGTCCACACCCACCCACGCCAGATGACTT
GAGGCGTTCAATCTAATTATCTTTATCTCCAGCCTATCTTTGCGTGTAGG
GTCGTGCCCCACCTGTTCCCTAAGCTCGTGATTGAAAATGAGAAGAGTGT
GACGCTGTTGGGCCTTTCTCTCCTTAACTCCCCGCAGGTTGTGTCAGCAG
GCCGCGTCTCTTCACTTACGTTTGTTTCCCCCCCCTAAATCTGTTCCCTC
CCACCCCAAAAAAAGCAGAGGAGGGTATTTATTACTTGCGACGGTTGCAT
ATCGTGCGCGCGCGTGTACCCTACTCGCGGGACACCCATTAAGTTTCGAA
GTGTGCACGATGATATATGCTGATTATTTTCTGTATTGAGAGTACGGCGT
TGTTCCATCGTCAAGGGACCAATCCCTAACCCATGGATATACGAACCGCG
CACGTACCACGCGTTTACCGCAGCTGCCTGACGGCTGGCTTGTTGACCAT
GGCGATGTTTTTTTTCATCTACATTAGCTTGCTCCGAAACCTGTACTCGA
GAAATGGATGTGATCTCCGTGTTGCGCACGTGCACTGTCGTCCGGCGGGG
GTCCGTTACAATCCTTAGGTCGATTGGTGGTGGATGGGCAAAGGGGGATG
GCGCAACTTGAACAGAGGGTCTGGCAGACAGAACGTACGTTTCTTTCATC
CTAGGTTTACCAGGTAGGTGAGAGTTTAGTCTCTCCTTACAGTGCGCGTA
GACAAACTTGCTCTTTTCCACCGGTGGTTTAGGTTTGTCGCCATTTCTTC
GTAAGGTTTCACAGCTGGTGGAATGGGAAAAGCAGGTCGACTTCGCCTCG
CGTGTGATAAAGAAAATGTGCGAAGGGCAGTCGCAGGTAGGTGCGGTAGA
AGAGGCCGTGACTGGCCTGTCTCGGAACGCCGAAAAAAGTGCCGTTTGGG
AAAACCTGGATTGAATTTTTGGACTCGGTTGGAGCTGGGAGCTCTTCCGT
GGGACCCCCAAGCGACATGATCGACACGTCATACACTGATACACTTCATC
CCCAACTGTGAATCTCCATAGAACTGCAAACACAGCAGAATCAATCAGAG
AGTGCTGTGAGTAGACTATGTCTGTAAGCCCCCCTACTCGCGACACGAAC
TTGATTCCAGAATCGCACGTTTCCGAAGACTACGCCGACCTGAAATACGG
AAATTCCCATAGAAACAATTGCAGTACAAAGATCACACCGAAAATCCCGA
ATAGTATCAAACCGAACGAAAACATTAATATGACGAAACACTGCCACATT
CGAAATAAACCAACGTAACACGTCAGAGGTTCATGACGTGTTTGCGGTGG
AACTCGAACGCCTTCGCGGGCACTATTTTCTTGAGGAAATCCGCGCCCTC
CAACTCAAATGACACACGGATTACCGAAATCCCCTTCCCCTCTACAACGT
CACGCAGGAACTTGTGTCTCACTTTGATGCGCTTCGTGTTCGAGTTCGAG
ATAGGTTTGTTCGCAAGCTGAATCGCCCCCTTTTTGTCGTCTAAGACAAG
GGTGCACGGCAAATCAACCTTCGGCAACATGAAAAACGCCACACGTCCCT
AAGGAACAACACTCCCTCACGACGCCACCTAACGCCACGTACTCTACCCT
CGCAAGTCGACGTCGTGATACACTGGGTCCTCGAAAACCGCATCACCACG
CTTCCTGCGTAAGACACGATTCCTCCTAATACCGACCTTCGGTCTGCTGC
CTTGCTGACAAGGTCGGCATCCGCGAAAGCCAGTAAAATAAATCCCTCTA
TTATCCCCTTCTGAAAAGAGGTACCAAAATGACTAGTCGTACGTAGATGC
CCCAACACTCCAAGAGCTACCTTCCAATGCAAAAGGTTCAGGGACGCGCA
GTCCCTGGCCAATGTCCTTACCGTATTGATCATGTCTTGCTTGGCCTGGG
TGGCCAACCGCATGAGCGAGCTAATCGATTCCCAGAACGGAAACGTCACG
TTAGACTTGTCGGCGCTAAGTACGAATGCTTCAGTCCGACACGCAGGGGG
GCAGTCTTGCCCCATGTGACCCCGTACTCTTTTGCCAACTCGTCCACGAA
GTCGACTAAGAAATCGTCAGTCTACCGGCCGTTTTGTTCTCTCGTAGAAG
CACCCAGAGTATCGTCGCAACTCTCCAAGGTTCGTCACCGGCACGGATTT
GTTCAATTCCTCCCCGACATGTCACACCTTTCCTGCTCTTCTAAGATATC
ATCCACATTCACAACAAGAATCAACTCCACACGCGCATCCTCGATCAGGC
GAAACATACACGCGTCTGCCAAGCAATGTTCAAGTCCCAACGCAATCATG
GGGCATTTTTAGGGGTAACTGAAGGGAGGTCACGGTACATCCGTCACCCC
GTCACGCATTAGTATTTTTTTCATGTTAAGTATCAGGCCCTCTGTTTCTT
GATTGATCCTTGAGATCCAAGCTCTACGTTTGGTGCGAACTCGCCGTATG
CTGCGATCGAATGATGAAGGAAGCATACCGCATACCAAACTCAGGGGTAG
AGCACTTTACAAGGCTCGCGTTGAAGTACTACACCGCATGTCGTGTTTCC
TTTGAATTATCACAATTACTTTACCGGAATCTCGGTATCTTGCGCTGTAC
ATACGGTGCTTTGACGCCCACGCTTCACGCACGCACGCACGCGTTTGAGG
TGGCGTGACATGCCACATCCCGTTTTTTCAAGAATCGATGTCTTTTCAGC
AGGTCCGGCGATTGCGTCAAACGAAGCGGCGTTCTAGCGACGTTGTCCGT
AGCTCCATCTATCGGCTCATCACTCGACACTGGTCGAGATCTTTGCTGCC
GAGACACGGGCTTTCATTTCGATCCGACCGGGGTTGCGCGCTTCGCCATG
CGACCCACGAATGTTTCCTAATTCCATGACGTGGCATGTCCTATCCGCTC
CTGTTTCTTCTGTTGCCCTTTGTTCTTTAGGCCACGCTACGACGGACCGA
CGGCCTCATCTTTCGGCAGAGTAGAGCTGGCGGCGTGAGCGACGGTCGAC
AGACAGACCGACA
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:45129..49741+

>mRNA_P-fluviatile_contig11.980.1 ID=mRNA_P-fluviatile_contig11.980.1|Name=mRNA_P-fluviatile_contig11.980.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=282bp|location=Sequence derived from alignment at P-fluviatile_contig11:45129..49741+ (Porterinema fluviatile SAG_2381)
CTGGAAGGCGCGAAAGTCACCCTGGGGTGGACTTACCCCCAACGTAAATC
CCACGCAGGCGAAGGATATCTGGGCAAGAAACGCTGGAAGGCGCGAAAGT
CACCCTGGGGTGGACTTACCCCCAACGTAAATCCCACGCAGGCGAAGGAT
ATCTGGGCAAGAAACGGCCACGCTACGACGGACCGACGGCCTCATCTTTC
GGCAGAGTAGAGCTGGCGGCGTGAGCCACGCTACGACGGACCGACGGCCT
CATCTTTCGGCAGAGTAGAGCTGGCGGCGTGA
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