prot_P-fluviatile_contig1.479.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.479.1
Unique Nameprot_P-fluviatile_contig1.479.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length464
Homology
BLAST of mRNA_P-fluviatile_contig1.479.1 vs. uniprot
Match: A0A6H5L0A8_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A8_9PHAE)

HSP 1 Score: 404 bits (1039), Expect = 1.390e-134
Identity = 252/434 (58.06%), Postives = 320/434 (73.73%), Query Frame = 0
Query:   36 GRDRTMIALKTAGTDTPSSQQSQGNIESAPSQLADRTKTVRDQMRDAIWKATDSISHALEDLPDFGANANETLLKLGSFVEDIDEKYFSKYLSIGATPTYRETLAAASTATLERDG-GVSTATEGTPKVGKAPEKSKNAAKDDPVESAVTGASAKTLDVAAKGVSAAVGTAXXXXXXXXXXXXXXXEAPPKAASKKGMAGTASGTVQLDRPKQVQGVFDEIQKQAVEYYRSTPSGGAV-----AQGGVATPLPEAVQKLEAQLESLLAESKFKPRKLKKEKRTRLVAAISAMEAAYPADANPLGDPSLSGQWSVVYSSSSKLIGRALRGVLAGFFKTSDARQVVDTGAFSVMNACRARLRMTPLAMRVAKQGSFRAIGDRKMVVDMPPTKKGLLRRLLPSFRPGKVEAEVTYLSNKWRICRTEGVTIAFRKSEG 463
            G +R + A+  AGT+  SS+ +      A S    +T  +RDQ+RDAIWKATDSI+HA+E +PD  AN NE+LLKLG+ VE+IDE+YFSKY+++GATP Y++TLAAA+T T    G GVS +  G P              D   E A   AS  + D A+K         XXXXXXXXXXXXXXX     A +++G    +SGTV+LDRPK+VQGVFD++QK+AV++Y++  S GA+     A+GG   P+ EA + LE +LESLL+ES FKPRKLKK+K+++LV AI AME +YPA ANPL DP+LSGQWSVVYSSSS+L+GR ++G+ +GFFKTSD RQVVDTGA SV+NACRARLR+TPLA+RVAK+GS+R   +RK++V+MPPTKKGLLRR+LPS R GKVEAEVTYLS+KWRICR  GVT+AFRKS G
Sbjct:   45 GLERGVKAIGAAGTEAASSKSTSTGSTDASS----KTLLLRDQLRDAIWKATDSITHAVEGMPDVMANTNESLLKLGTLVENIDERYFSKYVAVGATPAYKDTLAAAATTTSGATGTGVSMSKGGKP--------------DKMTEEAEGLASTASSD-ASKAXXXXXXXXXXXXXXXXXXXXXXXXDAKAAVAEEG----SSGTVKLDRPKEVQGVFDDVQKKAVDFYKT--SSGAMSKSQDAEGGAVAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVDAIKAMEESYPAGANPLADPALSGQWSVVYSSSSRLLGRVIKGLFSGFFKTSDRRQVVDTGASSVLNACRARLRLTPLALRVAKKGSYRKTAERKVLVEMPPTKKGLLRRVLPSLRAGKVEAEVTYLSDKWRICRAGGVTLAFRKSGG 453          
BLAST of mRNA_P-fluviatile_contig1.479.1 vs. uniprot
Match: D8LNG8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG8_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.640e-71
Identity = 169/330 (51.21%), Postives = 220/330 (66.67%), Query Frame = 0
Query:   30 RLATRGGRDRTMIALKTAGTDTPSSQQSQGNIESAPSQLADRTKTVRDQMRDAIWKATDSISHALEDLPDFGANANETLLKLGSFVEDIDEKYFSKYLSIGATPTYRETLAAASTATLERDGGVSTATEGTPKVGKAPEKSKNAAKDDPVESAVTGASAKTLDVAAKGVSAAVGTAXXXXXXXXXXXXXXXEAPPKAASKKGMAGTASGTVQLDRPKQVQGVFDEIQKQAVEYYRSTPSGGAV-----AQGGVATPLPEAVQKLEAQLESLLAESKFKPRKLKKEKRTRLVAAISAMEAAYPADANPLGDPSLSGQWSVVYSSSSKLIGR 354
            R    GG +R + A+  AGT+  SS+    +I S P+ ++ +T  +RDQ+RDAIWKATDSI+HA+E +PD  AN NE+LLKLG+ VE IDE+YFSKY++ GA P+Y++TLAAA+                          SK    D   + A   AS  + DV+           XXXXXXXXXXXXXXX      A ++G    +SGTV+LDRPK+VQGVFD+IQK+AVE+Y++  S GA+     A+GG A P+ EA + LE +LESLL+ES FKPRKLKK+K+++LVAAI AME +YPADANPL DP+LSGQWSVVYSSSS+ +GR
Sbjct:    6 RPTAEGGLERGVKAIGAAGTEASSSK----SISSTPTDVSSKTLLLRDQLRDAIWKATDSITHAVEGMPDVTANTNESLLKLGTLVEKIDERYFSKYVTAGANPSYKDTLAAAAXXXXXXXXXXXXXVAA----------SKGGKLDKMTKEAEGLASTVSSDVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEEG----SSGTVKLDRPKEVQGVFDDIQKKAVEFYKT--SSGAMSKSQDAEGGAAAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVAAIKAMEESYPADANPLADPALSGQWSVVYSSSSRGLGR 315          
BLAST of mRNA_P-fluviatile_contig1.479.1 vs. uniprot
Match: A0A836CKA5_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.280e-28
Identity = 132/450 (29.33%), Postives = 190/450 (42.22%), Query Frame = 0
Query:   75 VRDQMRDAIWKATDSISHALEDLPDFGANANETLLKLGSFVEDIDEKYFSKYLSIGATPTYRETLAAAST------------------ATLERDGGVSTATEGTPKVGKAPEKSKNAAKDDPVE--SAVTGASAKTLDVAAKGVSAAVGTAXXXXXXXXXXXXXXXEAPPKAASKKGMAGTASGTVQLDRPKQVQGVFDEIQKQAVEYYRSTPSGG---------------AVAQGGVATPLPEAVQK------LEAQLESLLAESKFKPRKLKKE---------KRTRL---------VAAISAMEAAYPADANPLGDPSLSGQWSVVYSSSSKLIGRALRGVLAGFFKTSDARQVVDTGAFSVMNACRARLRMTPLAMRVAKQGSFR-----AIGDRKMVVDMPPTKKGLLRRLLPSFRPGKVEAEVTYLSNKWRICRTEGVTIAFRK 460
            V +++RDAI  A+D++  A+E      A+ +  L  LG  + ++++KYF+   +   T +Y  TL  + T                  +  E    + T  E    +G  P  +  A    PV+  SA  G+ AK +  AA    AA                     P K  SK G+         L RP QVQ V + +QK+AV  Y+                     A     VA  +PE          LE +LE LL  S   P ++ ++         K TRL         V  + A+EA+ P  A+PL  P L+G W++VYSSS  +   AL    + FFK S   Q VD  A +V+N+   RLR+TPL +R  + G+F             +V+     +G   R    FR G     VTYLS  WRICR++GV +AFRK
Sbjct:   58 VGEKLRDAIMDASDTVWSAVETKLAEAADIHP-LEDLGKMLMELEDKYFATSSAASPTSSYLSTLGGSPTPPPLNITAEPEEVITMEASVAEIAAELDTGAEAAEAIGGTPVPAVAA----PVQEASATVGSEAKAVPSAAVATPAA---------------PPAKATPAKQQSKAGL--------DLQRPAQVQNVIESLQKRAVAMYKGAAQAASAGFVRDEDVPAVAVAAXXXXVADAMPEIAPPRASEAMLEKRLEDLLKTSDMSPARMSEQDQAALTTLHKSTRLTTHLHATHQVTTLEALEASTPPGAHPLHSPLLTGDWALVYSSSGSVFKAALGKKRSAFFKVSSPTQSVDAAAGTVLNSALLRLRLTPLRLRARQAGTFTLDKGSGAPGATAIVNFA---RGGFGRFAKLFRRGTAAVTVTYLSTGWRICRSDGVVLAFRK 476          
BLAST of mRNA_P-fluviatile_contig1.479.1 vs. uniprot
Match: D8LNG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.100e-17
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
Query:  415 MPPTKKGLLRRLLPSFRPGKVEAEVTYLSNKWRICRTEGVTIAFRKSEG 463
            MPPTKKGLLRR+LPS R GKVEAEVTYLS+KWR+CR  GVT+AFRK+ G
Sbjct:    1 MPPTKKGLLRRVLPSLRAGKVEAEVTYLSDKWRVCRAGGVTVAFRKNGG 49          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L0A8_9PHAE1.390e-13458.06PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
D8LNG8_ECTSI1.640e-7151.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CKA5_9STRA7.280e-2829.33PAP_fibrillin domain-containing protein n=1 Tax=Tr... [more]
D8LNG7_ECTSI1.100e-1779.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 304..393
e-value: 4.1E-6
score: 26.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..463
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..24
score: 0.692
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5297686..5305458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.479.1mRNA_P-fluviatile_contig1.479.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5295132..5305497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.479.1 ID=prot_P-fluviatile_contig1.479.1|Name=mRNA_P-fluviatile_contig1.479.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=464bp
MEHKMQMTNFIALLLLAGAQLAGALVVPARLATRGGRDRTMIALKTAGTD
TPSSQQSQGNIESAPSQLADRTKTVRDQMRDAIWKATDSISHALEDLPDF
GANANETLLKLGSFVEDIDEKYFSKYLSIGATPTYRETLAAASTATLERD
GGVSTATEGTPKVGKAPEKSKNAAKDDPVESAVTGASAKTLDVAAKGVSA
AVGTAGAAASTATRKAGAATEAPPKAASKKGMAGTASGTVQLDRPKQVQG
VFDEIQKQAVEYYRSTPSGGAVAQGGVATPLPEAVQKLEAQLESLLAESK
FKPRKLKKEKRTRLVAAISAMEAAYPADANPLGDPSLSGQWSVVYSSSSK
LIGRALRGVLAGFFKTSDARQVVDTGAFSVMNACRARLRMTPLAMRVAKQ
GSFRAIGDRKMVVDMPPTKKGLLRRLLPSFRPGKVEAEVTYLSNKWRICR
TEGVTIAFRKSEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom