mRNA_P-fluviatile_contig22.4992.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4992.1 vs. uniprot
Match: A0A6H5JB55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB55_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 4.080e-132 Identity = 231/444 (52.03%), Postives = 289/444 (65.09%), Query Frame = 1
Query: 31 LIAAITPIAAGGGCLQTSLSIETTALPLSGCYQESIYAGTYETLVWTIEGRDIAPTGTKAIVASLLNGPLADPVWALGSVISLPQNTWSDGYSAGLEVVDVVCTGTSPFWETDDPTMETQWICDANKDGLRSAAENGDFSVVACACPGSAGNLSTPAP--------------VAVVQVPXXXXXXXXXXXXXXPAPSSAAVVEVTTAPVAAERGIAPVANNATPAPSVVGALAPIAEACNMTLSSLRLEDVSGCYVGQASSNTRARWVKPDQSAFIEWQDNANASESGHWAVVRAGFGAPNVVKCIGNDDVADPTAVPELMWRCDLVGSGVYTPAVSFDF-GLECSAACDVSTSGDEGSSSGGSRGRT--VAIAVGSITAGIGVA-VVMIGAAVLKNRKRRRSARGTGAKSVASTATGAVDANVAPAPIPVFEPWGTRPAPRYY 1308
L+A ++P+A G C Q++L+IETTA SGCYQES YAG YET VWTI+GRD+A GTKAI+A L NGPL DPVW +G+V +LPQNTWSDGYS+GLEVV++VCTGTS FWET+DP E QW CD + DG+ S E+GD +V C C G +STPAP + V+ XXXXXXXXXXXXXX A +N TPAP V G +AP A ACN+TL+S ++D+SGCY SSN R RWVK D++A IEWQ+ +++ G+W V+ AGFG P+ +KCIG+DDV DPT +P W CDL G G YTPA+SFDF L C+ +C+++TS + +AI VGS+ +G+GVA +V+IGA +LK RKR GTG A A + APAPIPVFEPWGTRPAPRYY
Sbjct: 12 LVALLSPMATGALCTQSALTIETTAFTFSGCYQESPYAGLYETKVWTIDGRDVAEFGTKAILADLQNGPLVDPVWVIGTVTALPQNTWSDGYSSGLEVVNLVCTGTSAFWETEDPAQEIQWACDTDGDGVTSVPESGDLAVT-CGCAGMPTTISTPAPXXXXXXXXXTPEPTIGVISHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGAN------SNQMTPAPIVGGTVAPTAPACNLTLASNDMQDMSGCYARGTSSNARGRWVKLDETAIIEWQEAQGSNKQGNWVVLVAGFGLPDEIKCIGSDDVEDPTEIPVTSWYCDLEGEGSYTPAISFDFEALTCTGSCEIATSVESXXXXXXXXXXXXXMAIVVGSVVSGVGVAAIVIIGALLLKRRKRGAKTNGTGPAENADPADPS-----APAPIPVFEPWGTRPAPRYY 443
BLAST of mRNA_P-fluviatile_contig22.4992.1 vs. uniprot
Match: D7FGX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX6_ECTSI) HSP 1 Score: 216 bits (549), Expect = 2.280e-64 Identity = 104/169 (61.54%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 MRKARVALEALIAAITPIAAGGGCLQTSLSIETTALPLSGCYQESIYAGTYETLVWTIEGRDIAPTGTKAIVASLLNGPLADPVWALGSVISLPQNTWSDGYSAGLEVVDVVCTGTSPFWETDDPTMETQWICDANKDGLRSAAENGDFSVVACACPGSAGNLSTPAPV 507
MRKA + L+A ++P+AAG C Q++L+IETTA SGCYQES YAG YET VWTIEGRD+A GTKAI+A L NGPL DPVW +G+V +LPQNTWSDGY++GLEVV++VCTGTS FWET+DP E QW CD + DG+ S E+GD +V C C G +STPAP+
Sbjct: 4 MRKAWTPV--LVALLSPMAAGALCTQSALTIETTAFTFSGCYQESPYAGLYETKVWTIEGRDVAEFGTKAILADLQNGPLVDPVWVIGTVTALPQNTWSDGYNSGLEVVNLVCTGTSTFWETEDPAQEIQWTCDTDGDGVTSVPESGDLAVT-CGCAGMPTTISTPAPM 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig22.4992.1 >prot_P-fluviatile_contig22.4992.1 ID=prot_P-fluviatile_contig22.4992.1|Name=mRNA_P-fluviatile_contig22.4992.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=438bp MRKARVALEALIAAITPIAAGGGCLQTSLSIETTALPLSGCYQESIYAGTback to top mRNA from alignment at P-fluviatile_contig22:2091591..2096176+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig22.4992.1 ID=mRNA_P-fluviatile_contig22.4992.1|Name=mRNA_P-fluviatile_contig22.4992.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4586bp|location=Sequence derived from alignment at P-fluviatile_contig22:2091591..2096176+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig22:2091591..2096176+ >mRNA_P-fluviatile_contig22.4992.1 ID=mRNA_P-fluviatile_contig22.4992.1|Name=mRNA_P-fluviatile_contig22.4992.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2628bp|location=Sequence derived from alignment at P-fluviatile_contig22:2091591..2096176+ (Porterinema fluviatile SAG_2381)back to top |