prot_P-fluviatile_contig9.15041.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15041.1
Unique Nameprot_P-fluviatile_contig9.15041.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length198
Homology
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BLAST of mRNA_P-fluviatile_contig9.15041.1 vs. uniprot
Match: D7G201_ECTSI (Sel1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G201_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 9.440e-26
Identity = 114/202 (56.44%), Postives = 130/202 (64.36%), Query Frame = 0 
Query:    1 MLYNGTGCLRDYGAALRYYLRAANAGEASSANAVGLLYELGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLSALASAAGLPVFRAPYPAYL-PSQNQSDRQYGSGGXXXXXXXXXXXGNCAGGAKFAASLSQQTLGDGDVGSDPGEHAGIAERE---HRPQALVMFQRAAELGHTKATEEIRRLRVRERMDHL 198
            MLY GTGCLRDYGAALRYY+RAA+AGEA+SANA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DPLSA+ASAAGLP+F+      L PS        G+G               AGG  F A+       DGD+    G   G+ +R    +RP AL MFQRAAELGH +A  E+ RLR+RER+DHL
Sbjct:  847 MLYTGTGCLRDYGAALRYYVRAAHAGEATSANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERGDPLSAIASAAGLPMFQEQQQLPLRPSSGFLTSMAGAG--CPATATPPRCSPPAGGGLFGANGGD----DGDLAVASGSTGGVGQRPLWGNRPLALQMFQRAAELGHPEAMREVHRLRLRERIDHL 1042
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G201_ECTSI9.440e-2656.44Sel1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 1..27
e-value: 48.0
score: 7.8
coord: 28..63
e-value: 8.7E-7
score: 38.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 1..26
e-value: 0.0017
score: 19.0
coord: 166..179
e-value: 5.9
score: 7.7
coord: 28..63
e-value: 3.7E-5
score: 24.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..88
e-value: 7.2E-18
score: 66.6
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 1..185
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:366725..368071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15041.1mRNA_P-fluviatile_contig9.15041.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 366708..368071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15041.1 ID=prot_P-fluviatile_contig9.15041.1|Name=mRNA_P-fluviatile_contig9.15041.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=198bp
MLYNGTGCLRDYGAALRYYLRAANAGEASSANAVGLLYELGRGVARDLAA
ASAWYQRAADLGSADGAFNAALLLERGDPLSALASAAGLPVFRAPYPAYL
PSQNQSDRQYGSGGSGGGGGSANSAGNCAGGAKFAASLSQQTLGDGDVGS
DPGEHAGIAEREHRPQALVMFQRAAELGHTKATEEIRRLRVRERMDHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf