prot_P-fluviatile_contig9.15036.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15036.1
Unique Nameprot_P-fluviatile_contig9.15036.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length204
Homology
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BLAST of mRNA_P-fluviatile_contig9.15036.1 vs. uniprot
Match: D8LUC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC9_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.160e-43
Identity = 69/110 (62.73%), Postives = 87/110 (79.09%), Query Frame = 0 
Query:   29 LQGRRGLGSTIKQEPIVPEKLLVKDDWIITRDFFYKRDQNKNGADKLNVRDNRLAKFDKTGEVGYWKVVRRPIPGAPKRRIPLISEGMDFFVLDIPEQGERKNLIVSYEV 138
            +  RRG+   +K  P+V +    K DW ITRDFF+KRDQ KNGAD L  R+N+LA+F+ +GEVGYWK+VRRPIPGAPKR+ PL +EG+D+ VLDIPEQG R+NLIVSYE+
Sbjct:    1 MNSRRGIKGAVKNTPLVQDGSFAKADWRITRDFFFKRDQAKNGADFLTARENKLARFNNSGEVGYWKLVRRPIPGAPKRQSPLGNEGIDYLVLDIPEQGPRRNLIVSYEI 110
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC9_ECTSI1.160e-4362.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.898
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:310719..314741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15036.1mRNA_P-fluviatile_contig9.15036.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 310599..314860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15036.1 ID=prot_P-fluviatile_contig9.15036.1|Name=mRNA_P-fluviatile_contig9.15036.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=204bp
MPRGRRTTCGFTGLLLMMLTVLVGLASALQGRRGLGSTIKQEPIVPEKLL
VKDDWIITRDFFYKRDQNKNGADKLNVRDNRLAKFDKTGEVGYWKVVRRP
IPGAPKRRIPLISEGMDFFVLDIPEQGERKNLIVSYEVCCLAYFGGPRGV
ALAINPIALFHYLGWRLASCWKNVSWLLGRWASCDIRSTVSADTRGDSRQ
YRR*
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