prot_P-fluviatile_contig9.15001.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig9.15001.1
Unique Name	prot_P-fluviatile_contig9.15001.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	191

Homology

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A6H5KSN1_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSN1_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.520e-91
Identity = 157/193 (81.35%), Postives = 168/193 (87.05%), Query Frame = 0

Query:    1 MADEVDFEPEYEEEQPMEEADDG---AXXXXXXXXXXXXXXXXNGGAAPAQGGKGRKGGAKGRGHRNVPAEVEDRYEGRGGVFESVDTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVRGGGKGAGQPRRRR 190
            MADEVDFEPEYEEEQPM++AD+G         XXXXXXXXXXX       +GGKGRKGGAKGRGH+    EVEDRYEGRGGVFESVD G  GGPQRSVEGWILFVRNVHEEAQEDDIMDKFSE+GAVKNLHVNLDRRTGFVKGYCLVEFEK+EEAQ AIDEMDGSQLL+Q+ISV+WAFV+GG KGAGQPRRRR
Sbjct:    1 MADEVDFEPEYEEEQPMDDADNGQAGGREGQAXXXXXXXXXXXXXXXXXXKGGKGRKGGAKGRGHQGGSMEVEDRYEGRGGVFESVDVGSAGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLDQDISVSWAFVKGG-KGAGQPRRRR 192

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A7S2G621_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G621_9STRA)

HSP 1 Score: 181 bits (458), Expect = 7.340e-55
Identity = 95/146 (65.07%), Postives = 110/146 (75.34%), Query Frame = 0

Query:   46 PAQGGKGRKGGAKGRGHRNVPAEVEDRYEGRGGVFESVDTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFV-RGGGKGAGQPRRRR 190
            P   GKG+ GG K +G        E+RY+GRGGVFESVD G  GGP +SVEGWILFVRNVHEEAQEDDI+DKFSE G V+N+HVNLDRRTGFVKGY LVEFE REEA+ AI+ ++G +LL Q ISV WAF+  G GK  G+   RR
Sbjct:   29 PPARGKGKGGGGKQKGRGFKGGNDEERYDGRGGVFESVDAGGEGGPLQSVEGWILFVRNVHEEAQEDDILDKFSESGDVRNIHVNLDRRTGFVKGYALVEFESREEAENAIETLNGEELLGQTISVDWAFLDAGSGKKKGRKGGRR 174

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A7S2DBP5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBP5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.420e-52
Identity = 86/133 (64.66%), Postives = 99/133 (74.44%), Query Frame = 0

Query:   58 KGRGHRNVPAEVEDRYEGRGGVFESVDTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVRGGGKGAGQPRRRR 190
            KGRGH     + EDRY+GRGG+FESV+T    GP  SVEGWILF+R VHEEAQEDDI+DKF E G V+N+HVNLDRRTGFVKGY LVE+E  EEA  AI+  +G +LL Q ISV WAF+   GK    PRRRR
Sbjct:   31 KGRGHTGTAMDTEDRYDGRGGIFESVETADGVGPAESVEGWILFIRGVHEEAQEDDILDKFLECGEVRNIHVNLDRRTGFVKGYALVEYESFEEATSAIETFNGQELLGQTISVDWAFLSDSGK---HPRRRR 160

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A7S3GV69_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV69_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.450e-48
Identity = 77/121 (63.64%), Postives = 95/121 (78.51%), Query Frame = 0

Query:   58 KGRGHRNV-PAEVEDRYEGRGGVFESVDTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVR 177
            KGRGH +    +  DRY GRGGVFE++  G   GP +S+EGWI+FV NVH+EAQEDDI+DKFSE+G VKN+HVNLDRRTGFVKGY LVEFE+ ++AQ AI  +DG +LL+Q I V WAF +
Sbjct:   39 KGRGHNSGHDGDDGDRYNGRGGVFENIQRGSGAGPLQSIEGWIVFVTNVHQEAQEDDILDKFSEYGTVKNIHVNLDRRTGFVKGYALVEFEELKDAQAAIQGLDGKKLLDQVIQVDWAFKK 159

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A7S2S198_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S198_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.400e-46
Identity = 91/176 (51.70%), Postives = 114/176 (64.77%), Query Frame = 0

Query:    1 MADEVDFEPEYEEEQPMEEADDGAXXXXXXXXXXXXXXXXNGGAAPAQGGKGRKGGAKGRGHRNVPAEVEDRYEGRGGVFESVDTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFV 176
            MA+EVDFEP+ E +   EEA                         PA  GK  K   KGRGH     + E+RYEGRGGVF+S+  G   GP +SVEGWILFVR VHEEAQEDDI+DKF++FG V+N+ VNLDRRTGFVKGY L+E+ + +EA  A++ M+G ++L Q ISV WAF+
Sbjct:    9 MAEEVDFEPDEETQMVAEEA-------------------------PASTGKSVK--RKGRGHV-AAMDAEERYEGRGGVFDSI-AGDGPGPAKSVEGWILFVRGVHEEAQEDDILDKFADFGEVRNIAVNLDRRTGFVKGYALIEYAEHDEAAKALEAMNGDEILGQTISVDWAFL 155

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A813G6W1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G6W1_POLGL)

HSP 1 Score: 154 bits (390), Expect = 6.810e-45
Identity = 80/144 (55.56%), Postives = 101/144 (70.14%), Query Frame = 0

Query:   43 GAAPAQGGKGRKGGAKGRGHRNVPAEVEDRYEGRGGVFESV-DTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVRGGGKGAGQ 185
            GA PA    GRK   KGRG      E ++RY G+ G F+S+ D G  GGP RS+EGW++ V  VHEEAQEDD+ + FSEFG +KNLH+NLDRRTGFVKGY  +E+E ++EA  AI  MDG  LL+Q++SV WAF + GGK  G+
Sbjct:   16 GAKPA----GRK--VKGRG-----GEQDERYAGKAGQFDSLQDDGGEGGPARSIEGWVVIVSGVHEEAQEDDVFEAFSEFGEIKNLHLNLDRRTGFVKGYAFIEYEAKQEADSAIKGMDGQALLDQKLSVQWAFTKAGGKRRGR 148

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A7S2V458_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V458_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.800e-44
Identity = 84/153 (54.90%), Postives = 101/153 (66.01%), Query Frame = 0

Query:   51 KGRKGGAKGRGHRNVPAEVEDRYEGRGGVFESVDTG-PHGGP------------QRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVRGGGKGAGQPRRRR 190
            KG  G  K +G  +V A+ ++RY G  G F+++  G    G             QRSVEGWI+FVR VHEEAQEDDI+D FSEFG VKN+HVNLDRRTGFVKGY LVE+E+  EAQ AI EM G +LL QE++V WAF + GG   G  RR R
Sbjct:   52 KGSSGQVKTKGRGHVGAQTDERYGGASGEFDALGEGVAEAGESTSSTKLAAVAAQRSVEGWIVFVRGVHEEAQEDDILDVFSEFGDVKNIHVNLDRRTGFVKGYALVEYEQLAEAQAAIQEMSGKELLGQEVTVDWAFTKPGGSARGSRRRAR 204

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A6U2CUA9_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A6U2CUA9_HEMAN)

HSP 1 Score: 154 bits (389), Expect = 2.570e-44
Identity = 79/139 (56.83%), Postives = 100/139 (71.94%), Query Frame = 0

Query:   52 GRKGGAKGRGHRNVPA--EVEDRYEGRGGVFESVDTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVRGGGKGAGQPRR 188
            GRK   KGRG ++  A  E E+RY GR G FESVD     GP +SVEGWI FV  ++EEA E+D+ DKFS+FG +KNL + LDRRTGFVKGY LVE+E R+EAQ AI+EM+G++ +EQ ++V WAF +G  KG    RR
Sbjct:   43 GRK--VKGRGAKDAAAQMEAEERYSGRAGQFESVDNEGGKGPAKSVEGWICFVTGINEEANEEDVYDKFSDFGEIKNLQLPLDRRTGFVKGYALVEYELRKEAQAAIEEMNGAEFMEQTLTVDWAFTKGPFKGRQSTRR 179

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A7S0E2Z3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2Z3_9CRYP)

HSP 1 Score: 150 bits (380), Expect = 2.930e-43
Identity = 70/120 (58.33%), Postives = 92/120 (76.67%), Query Frame = 0

Query:   70 EDRYEGRGGVFESVDTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVRGGGKGAGQPRRR 189
            EDRY G+ G FESVDT    GP +SVEGWI+FV  +HEEA E+DI DKFSE+G +K + + LDRRTGFVKGY LVE+EK+ EAQ AI++M+G++L+EQ ++V WAF +G  +G    RR+
Sbjct:   37 EDRYAGKSGQFESVDTEGGPGPSKSVEGWIVFVMGIHEEANEEDIYDKFSEYGEIKQMQLPLDRRTGFVKGYALVEYEKKSEAQKAIEQMNGAELMEQTLTVDWAFSKGPIRGRASTRRK 156

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BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Match: A0A813H4X5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H4X5_POLGL)

HSP 1 Score: 150 bits (378), Expect = 4.080e-43
Identity = 71/125 (56.80%), Postives = 92/125 (73.60%), Query Frame = 0

Query:   58 KGRGHRNVPAEVEDRYEGRGGVFESV-DTGPHGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKREEAQLAIDEMDGSQLLEQEISVTWAFVRGGGK 181
            KGRG  N     +DRY G+ G FES+ D G  GGP RS+EGW++ V  VHEEAQEDD+ + FSEFG +KNLH+NLDRRTGFVKGY  +E+E ++EA+ AI  MD   LL+Q++SV +AF + GG+
Sbjct:   23 KGRGGEN-----DDRYAGKAGQFESIQDDGAEGGPARSIEGWVVVVSGVHEEAQEDDVFEAFSEFGEIKNLHLNLDRRTGFVKGYAFIEYESKQEAETAIKGMDSQSLLDQKLSVGFAFTKAGGR 142

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig9.15001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KSN1_9PHAE	1.520e-91	81.35	RRM domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A7S2G621_9STRA	7.340e-55	65.07	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2DBP5_9STRA	5.420e-52	64.66	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S3GV69_9STRA	4.450e-48	63.64	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S2S198_9STRA	1.400e-46	51.70	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A813G6W1_POLGL	6.810e-45	55.56	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]
A0A7S2V458_9STRA	1.800e-44	54.90	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6U2CUA9_HEMAN	2.570e-44	56.83	Hypothetical protein n=3 Tax=Hemiselmis TaxID=7792...	[more]
A0A7S0E2Z3_9CRYP	2.930e-43	58.33	Hypothetical protein n=1 Tax=Hanusia phi TaxID=303...	[more]
A0A813H4X5_POLGL	4.080e-43	56.80	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008111	RNA-binding motif protein 8	PRINTS	PR01738	RNABINDINGM8	coord: 51..63 score: 36.92 coord: 89..103 score: 84.67 coord: 145..161 score: 40.59 coord: 163..175 score: 50.0
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 99..172 e-value: 9.5E-19 score: 78.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 100..169 e-value: 1.3E-17 score: 63.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 98..176 score: 15.562
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..181 e-value: 1.0E-28 score: 102.3
None	No IPR available	PANTHER	PTHR45894	FAMILY NOT NAMED	coord: 6..181
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 91..189

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig9	contig	P-fluviatile_contig9:45752..49173 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig9.15001.1	mRNA_P-fluviatile_contig9.15001.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig9 44421..50089 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig9.15001.1 ID=prot_P-fluviatile_contig9.15001.1|Name=mRNA_P-fluviatile_contig9.15001.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=191bp
MADEVDFEPEYEEEQPMEEADDGAEVGGDAEVAGEDVMVGNGGAAPAQGG
KGRKGGAKGRGHRNVPAEVEDRYEGRGGVFESVDTGPHGGPQRSVEGWIL
FVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKRE
EAQLAIDEMDGSQLLEQEISVTWAFVRGGGKGAGQPRRRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008111	RNA-bd_8
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf