prot_P-fluviatile_contig89.14960.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig89.14960.1
Unique Nameprot_P-fluviatile_contig89.14960.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length197
Homology
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A8F0JYJ1_9PHAE (Ribosomal protein L3 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYJ1_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 8.080e-80
Identity = 150/192 (78.12%), Postives = 167/192 (86.98%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQ+FDKNG+ALPVTV+ VG C ITQLKT+E NGYNAVQIGYSKG      KAELGHL+KNGLPPL HLCEY+VT+ ++YSLGQ+L VD+F++G FVN+TGKSIGKGFSGN KRHKFKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXXXXXXX     TVSKL+ILGID K NLLILKG+VPGKPGNL+ I
Sbjct:    1 MTQVFDKNGLALPVTVIRVGSCVITQLKTEEINGYNAVQIGYSKGQKLNLKKAELGHLKKNGLPPLSHLCEYRVTEQEDYSLGQVLNVDHFQIGQFVNITGKSIGKGFSGNHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKTITVSKLKILGIDLKNNLLILKGSVPGKPGNLIKI 192          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: D1J752_ECTSI (50S ribosomal protein L3, chloroplastic n=9 Tax=Ectocarpales TaxID=2877 RepID=D1J752_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.980e-75
Identity = 157/195 (80.51%), Postives = 165/195 (84.62%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNIRNS 195
            MTQIFDKNG+ALPVTVVSVGPCFITQLKT++TNGY+A+QIGYSKGH SKFSKAELGHLEKNGL P     EY+V   K YSL                 TGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGID KQNLLILKG+VPGKPGNL+NI NS
Sbjct:   12 MTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYRVXXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINS 206          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A0R6MC27_UNDPI (50S ribosomal protein L3, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6MC27_UNDPI)

HSP 1 Score: 233 bits (593), Expect = 5.920e-75
Identity = 152/192 (79.17%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQ+FDK+G+ALPVTV+S+G CFITQ+KT++ NGYNAVQIG+SKG      KAELGHL+KNGLPPL  LCEYKV DL+ YSLGQ+L              GKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGID KQNLLILKGNVPGKPGNL+NI
Sbjct:    1 MTQVFDKDGLALPVTVISIGSCFITQIKTEKLNGYNAVQIGHSKGRTVNLKKAELGHLKKNGLPPLSDLCEYKVMDLENYSLGQVLXXXXXXXXXXXXXXGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGNVPGKPGNLLNI 192          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: D1GJT2_FUCVE (50S ribosomal protein L3, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJT2_FUCVE)

HSP 1 Score: 226 bits (576), Expect = 3.480e-72
Identity = 139/192 (72.40%), Postives = 156/192 (81.25%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQIFDK G+ALPVTV+ VGPCFITQLKT++ NGY+AVQIGY K    K +KAELGHL KNGL PL +L EYKV D   YSLGQ++ VD F++G FVNV+GKSIGKGFSGNQKRH FKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXX          T+SKLEILGID K +LLILKG+VPGK GNL+N+
Sbjct:   12 MTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNV 203          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A8F0F776_9PHAE (Ribosomal protein L3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F776_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 6.120e-70
Identity = 146/192 (76.04%), Postives = 160/192 (83.33%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQIF+K G+ALPVTV++VGPC IT LKT+  +GYNA+QIGYS+G  S+F KAELGHL+KNGLPPLYHLCEYKV   + Y +GQ +              GKSIGKGFSGN KRHKFKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGID KQNLLILKGNVPGKPGNL+NI
Sbjct:    1 MTQIFNKEGLALPVTVINVGPCLITYLKTQNIHGYNAIQIGYSQGRDSQFKKAELGHLKKNGLPPLYHLCEYKVLSTQNYCVGQKIXXXXXXXXXXXXXXGKSIGKGFSGNHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDYKQNLLILKGNVPGKPGNLLNI 192          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A2I4Q2G8_9PHAE (50S ribosomal protein L3 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2G8_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 5.590e-68
Identity = 135/192 (70.31%), Postives = 159/192 (82.81%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQIF++ G ALPVTV+ VGPC ITQ+K  +T+GYNAVQIGYSK       K++L H +K+GLP   HLCEYK  ++++Y LGQ +TVD FK+G  VNVTGKS+GKG+SGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXX     T+SKLEILGI+  +NLL+LKGNVPGKPGNL+ +
Sbjct:    1 MTQIFNEEGSALPVTVIRVGPCLITQIKNLKTDGYNAVQIGYSKVKPKNIKKSQLCHFQKSGLPAFSHLCEYKNLEIQDYLLGQEITVDIFKMGQLVNVTGKSVGKGYSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKQITISKLEILGINLNENLLVLKGNVPGKPGNLLKV 192          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A8F0JZG8_9PHAE (Ribosomal protein L3 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZG8_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 4.700e-67
Identity = 142/192 (73.96%), Postives = 155/192 (80.73%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQ+FDKNG+ALPVTVV VGPC ITQLKT++ NGYNAVQIGYS+G  + F+KAELGHL KNGLPPL HL EYKV D + YSLGQI                 SIGKGFSG+ KRHKFKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TVSKLE+LGID KQNLLILKG++PGK GNL+NI
Sbjct:    1 MTQVFDKNGLALPVTVVRVGPCLITQLKTEKINGYNAVQIGYSQGRITNFNKAELGHLTKNGLPPLSHLHEYKVLDTENYSLGQIXXXXXXXXXXXXXXXXXSIGKGFSGSHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKITVSKLEVLGIDLKQNLLILKGSIPGKTGNLLNI 192          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A1L2F1Q4_9PHAE (Ribosomal protein L3 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1Q4_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.050e-66
Identity = 143/192 (74.48%), Postives = 156/192 (81.25%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQIFDK+G+AL VTV+ VGPCFITQLKT+  NGYNAVQIGY K    +  KAELGHL KNGLPPL HL EY+V DL  YSLGQ+               GKSIGKGFSGNQKRHKFKRGPMTHGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVSK+++LGID KQNLLILKG+VPGK GNL++I
Sbjct:   13 MTQIFDKDGLALAVTVIRVGPCFITQLKTESINGYNAVQIGYLKRQPIRVKKAELGHLTKNGLPPLLHLREYRVPDLNNYSLGQMXXXXXXXXXXXXXXXGKSIGKGFSGNQKRHKFKRGPMTHGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITVSKVQVLGIDEKQNLLILKGSVPGKSGNLLSI 204          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A7S6ZPA7_9STRA (50S ribosomal protein L3, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA7_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.450e-65
Identity = 126/196 (64.29%), Postives = 153/196 (78.06%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNIRNSH 196
            MTQIFD+ G+ +PVTV+ VGPC ITQ+KT   NGYNA+Q+GYS+    K +K + GHL+K G  PLYHL EYKV+ + ++ LG+ LTVD FK+G +VN++G+SIGKGFSGNQKRH FKRGPMTH  XXXXXXXXXXXXXXXXXXXXXX           T+SKL I+GID  +NLLI+KGNVPGKPGNL+NI  S+
Sbjct:   12 MTQIFDEEGLTIPVTVIRVGPCKITQIKTHRLNGYNAIQLGYSQVKPEKLTKPKHGHLKKVGCFPLYHLREYKVSKIDKFLLGETLTVDIFKIGQYVNISGQSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXKMAGQYGAKKITISKLRIIGIDKTRNLLIIKGNVPGKPGNLLNIVGSN 207          
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A7U0KSX5_OLILU (Ribosomal protein L3 n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0KSX5_OLILU)

HSP 1 Score: 197 bits (501), Expect = 8.360e-61
Identity = 95/192 (49.48%), Postives = 128/192 (66.67%), Query Frame = 0
Query:    1 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 192
            MTQIFD+NG+A+P+T++ VGPC++TQ+KTK   GYNA+QIGY+K      +K ELGHLEK  +P L HL EY+V ++ E++LGQ LTV+N + G F+NV+GK+IG GFSGNQKRH FK GPM+HGS                                 T+  L+IL ID + +++I+KG+VPGK GNL+NI
Sbjct:   12 MTQIFDENGLAIPITIIKVGPCYVTQIKTKLNEGYNAIQIGYAKIAQKHLTKPELGHLEKANVPNLKHLVEYRVDNVDEFTLGQSLTVENLEKGQFINVSGKTIGHGFSGNQKRHNFKIGPMSHGSKNHRAPGSIGAGTSPGRVLPGKRMAGHYGNRKQTIKNLQILEIDNEDSIIIVKGSVPGKVGNLLNI 203          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JYJ1_9PHAE8.080e-8078.13Ribosomal protein L3 n=1 Tax=Chorda asiatica TaxID... [more]
D1J752_ECTSI2.980e-7580.5150S ribosomal protein L3, chloroplastic n=9 Tax=Ec... [more]
A0A0R6MC27_UNDPI5.920e-7579.1750S ribosomal protein L3, chloroplastic n=28 Tax=L... [more]
D1GJT2_FUCVE3.480e-7272.4050S ribosomal protein L3, chloroplastic n=3 Tax=Fu... [more]
A0A8F0F776_9PHAE6.120e-7076.04Ribosomal protein L3 n=1 Tax=Protohalopteris sp. T... [more]
A0A2I4Q2G8_9PHAE5.590e-6870.3150S ribosomal protein L3 n=1 Tax=Dictyopteris diva... [more]
A0A8F0JZG8_9PHAE4.700e-6773.96Ribosomal protein L3 n=1 Tax=Desmarestia aculeata ... [more]
A0A1L2F1Q4_9PHAE1.050e-6674.48Ribosomal protein L3 n=1 Tax=Coccophora langsdorfi... [more]
A0A7S6ZPA7_9STRA4.450e-6564.2950S ribosomal protein L3, chloroplastic n=1 Tax=Sc... [more]
A0A7U0KSX5_OLILU8.360e-6149.48Ribosomal protein L3 n=1 Tax=Olisthodiscus luteus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 115..196
e-value: 5.7E-12
score: 47.4
NoneNo IPR availableGENE3D2.40.50.620coord: 22..84
e-value: 2.2E-15
score: 58.6
NoneNo IPR availablePANTHERPTHR11229:SF14coord: 1..195
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 84..169
e-value: 3.1E-12
score: 46.2
IPR019927Ribosomal protein L3, bacterial/organelle-typeTIGRFAMTIGR03625TIGR03625coord: 1..193
e-value: 1.8E-72
score: 241.4
IPR019927Ribosomal protein L3, bacterial/organelle-typePANTHERPTHR1122950S RIBOSOMAL PROTEIN L3coord: 1..195
IPR019927Ribosomal protein L3, bacterial/organelle-typeHAMAPMF_01325_BRibosomal_L3_Bcoord: 1..196
score: 31.784
IPR019926Ribosomal protein L3, conserved sitePROSITEPS00474RIBOSOMAL_L3coord: 91..114
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 1..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:44628..45218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14960.1mRNA_P-fluviatile_contig89.14960.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig89 44610..45811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig89.14960.1 ID=prot_P-fluviatile_contig89.14960.1|Name=mRNA_P-fluviatile_contig89.14960.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=197bp
MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKF
SKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVT
GKSIGKGFSGNQKRHKFKRGPMTHGSKNHRAPGSIGPGTTPGRVFPGKLM
AGQLGAKKITVSKLEILGIDGKQNLLILKGNVPGKPGNLVNIRNSH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000597Ribosomal_L3
IPR019927Ribosomal_L3_bac/org-type
IPR019926Ribosomal_L3_CS
IPR009000Transl_B-barrel_sf