mRNA_P-fluviatile_contig89.14960.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A6B7EYM7_9PHAE (50S ribosomal protein L4 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYM7_9PHAE) HSP 1 Score: 313 bits (803), Expect = 4.300e-103 Identity = 162/192 (84.38%), Postives = 176/192 (91.67%), Query Frame = 1
Query: 634 MITFLNFYKRLAEKSN--LKKDKVLTFPTKLFTGK-TSDEKVTLTLQVKEGQETNNYIIYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKIYTNKLNRKEWQLAIRGLIILKEPVITVIDHDFSSIVHKTSSFINLFQTCNINLSQNITIIVPTIEEGLFK 1200
MITFL+FYKRL +KSN +KKDK+LTFPTK+ TG TS E VTLTL++KEGQETNNYIIYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPW+QKGTGRARAGSNRSPLWKGGGVSFGPKPKIYTNK+NRKEWQLA+R LIILKEP+ITVIDHDFSSI KT+ FINLFQTCN+N SQ IT+IVPTI E LFK
Sbjct: 1 MITFLDFYKRLTKKSNPNVKKDKILTFPTKVLTGSDTSKETVTLTLKIKEGQETNNYIIYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWKQKGTGRARAGSNRSPLWKGGGVSFGPKPKIYTNKINRKEWQLAVRSLIILKEPIITVIDHDFSSIT-KTNDFINLFQTCNVNFSQKITLIVPTIAESLFK 191
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: D1J751_ECTSI (50S ribosomal protein L4, chloroplastic n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J751_ECTSI) HSP 1 Score: 306 bits (784), Expect = 3.020e-100 Identity = 154/189 (81.48%), Postives = 172/189 (91.01%), Query Frame = 1
Query: 634 MITFLNFYKRLAEKSNLKKDKVLTFPTKLFTGKTSDEKVTLTLQVKEGQETNNYIIYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKIYTNKLNRKEWQLAIRGLIILKEPVITVIDHDFSSIVHKTSSFINLFQTCNINLSQNITIIVPTIEEGLFK 1200
MITFL+FYKRL EKS+ KKDK+LTFP KL TG+ +E V+LTLQ+KEGQET+NYI+YRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPK Y NKLNRKEWQLA+RGLIILKEP IT+IDH+FSSI +KT+ FINLF+ C+I+ S+NIT IVP IEE LFK
Sbjct: 1 MITFLDFYKRLREKSSSKKDKILTFPLKLLTGEEKNETVSLTLQIKEGQETDNYILYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKTYINKLNRKEWQLAVRGLIILKEPSITIIDHNFSSIDNKTNIFINLFKGCDISFSKNITFIVPAIEENLFK 189
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A7T8G5K9_SCYLO (50S ribosomal protein L4, chloroplastic n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5K9_SCYLO) HSP 1 Score: 302 bits (773), Expect = 3.160e-98 Identity = 154/189 (81.48%), Postives = 166/189 (87.83%), Query Frame = 1
Query: 634 MITFLNFYKRLAEKSNLKKDKVLTFPTKLFTGKTSDEKVTLTLQVKEGQETNNYIIYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKIYTNKLNRKEWQLAIRGLIILKEPVITVIDHDFSSIVHKTSSFINLFQTCNINLSQNITIIVPTIEEGLFK 1200
MITFL+FYKRL EKSN +KDKVLTFP K G + E TLTLQVKE QET NYIIYRAYIAQR NERQGTV+TLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPK+YTNKLNRKEWQLA+R LI+LKEP+I VIDHDF+S+ KT +FINLF+TCNIN SQNIT IVP IEE LFK
Sbjct: 25 MITFLDFYKRLTEKSNSRKDKVLTFPIKPLVGGDNKETATLTLQVKEKQETENYIIYRAYIAQRINERQGTVSTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKLYTNKLNRKEWQLAVRSLIMLKEPIINVIDHDFNSMDIKTKAFINLFKTCNINFSQNITFIVPRIEESLFK 213
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A1I9LVD9_9PHAE (50S ribosomal protein L4, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVD9_9PHAE) HSP 1 Score: 295 bits (756), Expect = 5.190e-96 Identity = 147/189 (77.78%), Postives = 168/189 (88.89%), Query Frame = 1
Query: 634 MITFLNFYKRLAEKSNLKKDKVLTFPTKLFTGKTSDEKVTLTLQVKEGQETNNYIIYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKIYTNKLNRKEWQLAIRGLIILKEPVITVIDHDFSSIVHKTSSFINLFQTCNINLSQNITIIVPTIEEGLFK 1200
MITFLNFYKRL EKS+ +KDKVLTFP K TG+ + E TLTL+VKEGQET+NYIIYRAY+AQRTNERQGT NTLTRAEV+GGGRKPWRQKGTG+AR+GSNRSPLWKGGGVSFGPKPK YTNK+NRKEWQLAIR LI+LKEP+ITVID+DFSS+ +KT+ FI LF+ CNI S+NITII+P IE+ L K
Sbjct: 1 MITFLNFYKRLTEKSSSRKDKVLTFPIKFLTGENNKEIATLTLKVKEGQETDNYIIYRAYVAQRTNERQGTRNTLTRAEVRGGGRKPWRQKGTGKARSGSNRSPLWKGGGVSFGPKPKTYTNKINRKEWQLAIRALILLKEPIITVIDYDFSSLENKTNIFIQLFKVCNIGFSKNITIILPNIEDNLVK 189
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: D1J752_ECTSI (50S ribosomal protein L3, chloroplastic n=9 Tax=Ectocarpales TaxID=2877 RepID=D1J752_ECTSI) HSP 1 Score: 247 bits (630), Expect = 2.340e-77 Identity = 163/201 (81.09%), Postives = 171/201 (85.07%), Query Frame = 1
Query: 1 FGNKIGMTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNIRNS 603
FGNKIGMTQIFDKNG+ALPVTVVSVGPCFITQLKT++TNGY+A+QIGYSKGH SKFSKAELGHLEKNGL P EY+V K YSL TGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGID KQNLLILKG+VPGKPGNL+NI NS
Sbjct: 6 FGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYRVXXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINS 206
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A8F0JYJ1_9PHAE (Ribosomal protein L3 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYJ1_9PHAE) HSP 1 Score: 245 bits (625), Expect = 9.170e-77 Identity = 151/196 (77.04%), Postives = 169/196 (86.22%), Query Frame = 1
Query: 19 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNIRNSH 606
MTQ+FDKNG+ALPVTV+ VG C ITQLKT+E NGYNAVQIGYSKG KAELGHL+KNGLPPL HLCEY+VT+ ++YSLGQ+L VD+F++G FVN+TGKSIGKGFSGN KRHKFKRGPMTH XXXXXXXXXXXXXXXXXXXXXXXXXXXX TVSKL+ILGID K NLLILKG+VPGKPGNL+ I S+
Sbjct: 1 MTQVFDKNGLALPVTVIRVGSCVITQLKTEEINGYNAVQIGYSKGQKLNLKKAELGHLKKNGLPPLSHLCEYRVTEQEDYSLGQVLNVDHFQIGQFVNITGKSIGKGFSGNHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKTITVSKLKILGIDLKNNLLILKGSVPGKPGNLIKIIPSN 196
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: D1GJT2_FUCVE (50S ribosomal protein L3, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJT2_FUCVE) HSP 1 Score: 239 bits (610), Expect = 2.560e-74 Identity = 146/201 (72.64%), Postives = 163/201 (81.09%), Query Frame = 1
Query: 1 FGNKIGMTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNIRNS 603
FGNKIGMTQIFDK G+ALPVTV+ VGPCFITQLKT++ NGY+AVQIGY K K +KAELGHL KNGL PL +L EYKV D YSLGQ++ VD F++G FVNV+GKSIGKGFSGNQKRH FKRGPMTH XXXXXXXXXXXXXXXXXXXXXXX T+SKLEILGID K +LLILKG+VPGK GNL+N+ S
Sbjct: 6 FGNKIGMTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNVSPS 206
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A0R6MC27_UNDPI (50S ribosomal protein L3, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6MC27_UNDPI) HSP 1 Score: 233 bits (593), Expect = 6.020e-72 Identity = 153/196 (78.06%), Postives = 167/196 (85.20%), Query Frame = 1
Query: 19 MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNIRNSH 606
MTQ+FDK+G+ALPVTV+S+G CFITQ+KT++ NGYNAVQIG+SKG KAELGHL+KNGLPPL LCEYKV DL+ YSLGQ+L GKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGID KQNLLILKGNVPGKPGNL+NI S+
Sbjct: 1 MTQVFDKDGLALPVTVISIGSCFITQIKTEKLNGYNAVQIGHSKGRTVNLKKAELGHLKKNGLPPLSDLCEYKVMDLENYSLGQVLXXXXXXXXXXXXXXGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGNVPGKPGNLLNIVPSN 196
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A1L2F1Q4_9PHAE (Ribosomal protein L3 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1Q4_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.370e-68 Identity = 149/198 (75.25%), Postives = 162/198 (81.82%), Query Frame = 1
Query: 1 FGNKIGMTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFSKAELGHLEKNGLPPLYHLCEYKVTDLKEYSLGQILTVDNFKVGGFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDGKQNLLILKGNVPGKPGNLVNI 594
FGNKIGMTQIFDK+G+AL VTV+ VGPCFITQLKT+ NGYNAVQIGY K + KAELGHL KNGLPPL HL EY+V DL YSLGQ+ GKSIGKGFSGNQKRHKFKRGPMTHGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVSK+++LGID KQNLLILKG+VPGK GNL++I
Sbjct: 7 FGNKIGMTQIFDKDGLALAVTVIRVGPCFITQLKTESINGYNAVQIGYLKRQPIRVKKAELGHLTKNGLPPLLHLREYRVPDLNNYSLGQMXXXXXXXXXXXXXXXGKSIGKGFSGNQKRHKFKRGPMTHGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITVSKVQVLGIDEKQNLLILKGSVPGKSGNLLSI 204
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Match: A0A0R6LUU1_UNDPI (50S ribosomal protein L4, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUU1_UNDPI) HSP 1 Score: 224 bits (572), Expect = 1.610e-68 Identity = 111/169 (65.68%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 694 KVLTFPTKLFTGKTSDEKVTLTLQVKEGQETNNYIIYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKIYTNKLNRKEWQLAIRGLIILKEPVITVIDHDFSSIVHKTSSFINLFQTCNINLSQNITIIVPTIEEGLFK 1200
K+LTFP K+ TG+ S +++TLTL++KE T NY+I RAY+AQR+NERQGT NTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPK Y++K+NRKEWQL++R L+I K+ IT++D+ F+ + +KTS+ I + T NINL +N I+VP I+E L K
Sbjct: 5 KILTFPVKILTGEESGDEITLTLKLKEATNTINYVIQRAYLAQRSNERQGTANTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKFYSSKINRKEWQLSLRSLLIAKQKDITIVDN-FNFLEYKTSNIIKVLNTFNINLFENTLIVVPKIDEKLLK 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig89.14960.1 >prot_P-fluviatile_contig89.14960.1 ID=prot_P-fluviatile_contig89.14960.1|Name=mRNA_P-fluviatile_contig89.14960.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=197bp MTQIFDKNGIALPVTVVSVGPCFITQLKTKETNGYNAVQIGYSKGHASKFback to top mRNA from alignment at P-fluviatile_contig89:44610..45811+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig89.14960.1 ID=mRNA_P-fluviatile_contig89.14960.1|Name=mRNA_P-fluviatile_contig89.14960.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1202bp|location=Sequence derived from alignment at P-fluviatile_contig89:44610..45811+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig89:44610..45811+ >mRNA_P-fluviatile_contig89.14960.1 ID=mRNA_P-fluviatile_contig89.14960.1|Name=mRNA_P-fluviatile_contig89.14960.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1182bp|location=Sequence derived from alignment at P-fluviatile_contig89:44610..45811+ (Porterinema fluviatile SAG_2381)back to top |