prot_P-fluviatile_contig89.14957.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig89.14957.1
Unique Name	prot_P-fluviatile_contig89.14957.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	325

Homology

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: PSBA_ECTSI (Photosystem II protein D1 n=1129 Tax=Eukaryota TaxID=2759 RepID=PSBA_ECTSI)

HSP 1 Score: 652 bits (1683), Expect = 3.420e-236
Identity = 320/324 (98.77%), Postives = 323/324 (99.69%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAAS+EEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM PFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVA+SAP+VVG
Sbjct:   37 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: A0A1N7TJI8_9PHAE (Photosystem II protein D1 n=412 Tax=Eukaryota TaxID=2759 RepID=A0A1N7TJI8_9PHAE)

HSP 1 Score: 649 bits (1673), Expect = 1.140e-234
Identity = 314/324 (96.91%), Postives = 322/324 (99.38%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEA S+EEWLYNGGPYQL+VFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPV+ IWLT+LG+STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNE+LPVAVSAP++VG
Sbjct:   37 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEALSIEEWLYNGGPYQLVVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVIAIWLTSLGISTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVSAPSIVG 360

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: PSBA_PHATC (Photosystem II protein D1 n=590 Tax=root TaxID=1 RepID=PSBA_PHATC)

HSP 1 Score: 624 bits (1609), Expect = 6.480e-225
Identity = 304/324 (93.83%), Postives = 315/324 (97.22%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            M PTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNII+GAVIPSSNAIGIHFYPIWEAASV+EWLYNGGPYQLIV HFL+GVA +MGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+GVSTMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++APAV G
Sbjct:   37 MFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIITGAVIPSSNAIGIHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGVSTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: A0A451FLR3_9STRA (Photosystem II protein D1 n=179 Tax=Eukaryota TaxID=2759 RepID=A0A451FLR3_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 1.030e-221
Identity = 295/322 (91.61%), Postives = 312/322 (96.89%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAV 322
            MIP LLTA SC+II FIAAPPVDIDGIREPVAGSLLYGNNIISGA++PSSNAIGIHFYPIWEAAS++EWLYNGGPYQLIVFHFL+GVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET +  S NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTALG+STMAFNLNGFNFNQSVVDS+GRVINTWADI+NRA+LG+EVMHERNAHNFPLDLA + +LPVA++APAV
Sbjct:   37 MIPLLLTATSCFIIGFIAAPPVDIDGIREPVAGSLLYGNNIISGAIVPSSNAIGIHFYPIWEAASLDEWLYNGGPYQLIVFHFLLGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETEDGVSANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAIWPVVGIWLTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAVSNVLPVALNAPAV 358

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: A0A7S2RD40_9STRA (Photosystem II protein D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD40_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 6.510e-221
Identity = 296/324 (91.36%), Postives = 313/324 (96.60%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            MIPTLLTA SC+II FIAAPPVDIDGIREPVAGSL+YGNNIISGAVIPSSNAIG+HFYPIWEAASV+EWLYNGGPYQLIV HFL+GVA +MGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET++ ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW+TA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRADLG+EVMHERNAHNFPLDLA+ E+ PVAVSAPAV G
Sbjct:   49 MIPTLLTATSCFIIGFIAAPPVDIDGIREPVAGSLMYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTDSESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWITAMGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRADLGIEVMHERNAHNFPLDLAAGEVFPVAVSAPAVNG 372

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: A0A023JEK8_9STRA (Photosystem II protein D1 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A023JEK8_9STRA)

HSP 1 Score: 613 bits (1582), Expect = 8.430e-221
Identity = 297/324 (91.67%), Postives = 312/324 (96.30%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            M PTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIGIH YPIWEAAS++EWLYNGGPYQLIV HF IGV  +MGREWELSYRLGMRPWIFVAFSAPVAAA+AVF+VYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES ++GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+G+STMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++APAV G
Sbjct:   37 MFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGIHLYPIWEAASIDEWLYNGGPYQLIVLHFFIGVCTYMGREWELSYRLGMRPWIFVAFSAPVAAAAAVFVVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESPDFGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: PSBA_TRIAZ (Photosystem II protein D1 n=457 Tax=root TaxID=1 RepID=PSBA_TRIAZ)

HSP 1 Score: 605 bits (1560), Expect = 1.900e-217
Identity = 283/324 (87.35%), Postives = 313/324 (96.60%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            MIPTL++A +C++IAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQL++FHFLIGVAC++GREWELSYRLGMRPWI VAFSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPV+GIW TALGVSTMAFNLNGFNFNQS++DS+GRVI TWAD+INRA+LGMEVMHERNAHNFPLDLA+ ++ PVA++AP + G
Sbjct:   37 MIPTLVSAIACFVIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGVACYLGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSQGRVIGTWADVINRANLGMEVMHERNAHNFPLDLAAGDVAPVALTAPPING 360

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: A0A140KBD8_9CYAN (Photosystem II protein D1 n=7 Tax=Cyanobacteria TaxID=1117 RepID=A0A140KBD8_9CYAN)

HSP 1 Score: 605 bits (1559), Expect = 2.690e-217
Identity = 280/324 (86.42%), Postives = 312/324 (96.30%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            MIPTLLTA +C+IIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQL+VFHFLIG+ CWMGR+WELSYRLGMRPWI VA+SAPV+AA+AVFL+YP+GQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES+NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPV+GIW TA+G+STMAFNLNGFNFNQS++DS+G V+NTWADI+NRA+LG EVMHERNAHNFPLDLAS +I PVA++APA+ G
Sbjct:   37 MIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFLIGIFCWMGRQWELSYRLGMRPWICVAYSAPVSAATAVFLIYPLGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESLNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGISTMAFNLNGFNFNQSIMDSQGHVVNTWADILNRANLGFEVMHERNAHNFPLDLASGDIAPVALTAPAING 360

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: UPI000934559B (photosystem II q(b) protein n=1 Tax=Spirulina major TaxID=270636 RepID=UPI000934559B)

HSP 1 Score: 603 bits (1556), Expect = 7.720e-217
Identity = 284/324 (87.65%), Postives = 312/324 (96.30%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            MIPTLLTA +C+IIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQL++FHFLIG+ C+MGR+WELSYRLGMRPWI VA+SAPV+AASAVFL+YP+GQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGG+LFSAMHGSLVTSSL+RET+E+ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL AWPV+GIW TALGVSTMAFNLNGFNFNQSV+DS+GRVINTWADI+NRA+LG EVMHERNAHNFPLDLAS E  PVA++APA+ G
Sbjct:   37 MIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGIFCYMGRQWELSYRLGMRPWICVAYSAPVSAASAVFLIYPMGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGALFSAMHGSLVTSSLVRETTEIESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVIGIWFTALGVSTMAFNLNGFNFNQSVLDSQGRVINTWADILNRANLGFEVMHERNAHNFPLDLASAESAPVALTAPAING 360

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BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Match: A0A5P8VR66_9NOSO (Photosystem II protein D1 n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A5P8VR66_9NOSO)

HSP 1 Score: 603 bits (1554), Expect = 1.560e-216
Identity = 282/324 (87.04%), Postives = 311/324 (95.99%), Query Frame = 0

Query:    1 MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAVSAPAVVG 324
            MIPTLL A +C++IAFIAAPPVDIDGIREPVAGSL+YGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQL++FHFLIGV C++GREWELSYRLGMRPWI +A+SAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH  GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPV+GIW TALGVSTMAFNLNGFNFNQS++DS GRVI+TWAD+INRA+LGMEVMHERNAHNFPLDLA+ ++ PVA++APA+ G
Sbjct:   37 MIPTLLAATACFVIAFIAAPPVDIDGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGVFCYLGREWELSYRLGMRPWIAIAYSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSSGRVISTWADVINRANLGMEVMHERNAHNFPLDLAAGDVAPVALTAPAING 360

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig89.14957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
PSBA_ECTSI	3.420e-236	98.77	Photosystem II protein D1 n=1129 Tax=Eukaryota Tax...	[more]
A0A1N7TJI8_9PHAE	1.140e-234	96.91	Photosystem II protein D1 n=412 Tax=Eukaryota TaxI...	[more]
PSBA_PHATC	6.480e-225	93.83	Photosystem II protein D1 n=590 Tax=root TaxID=1 R...	[more]
A0A451FLR3_9STRA	1.030e-221	91.61	Photosystem II protein D1 n=179 Tax=Eukaryota TaxI...	[more]
A0A7S2RD40_9STRA	6.510e-221	91.36	Photosystem II protein D1 n=1 Tax=Rhizochromulina ...	[more]
A0A023JEK8_9STRA	8.430e-221	91.67	Photosystem II protein D1 n=4 Tax=Bacillariophyta ...	[more]
PSBA_TRIAZ	1.900e-217	87.35	Photosystem II protein D1 n=457 Tax=root TaxID=1 R...	[more]
A0A140KBD8_9CYAN	2.690e-217	86.42	Photosystem II protein D1 n=7 Tax=Cyanobacteria Ta...	[more]
UPI000934559B	7.720e-217	87.65	photosystem II q(b) protein n=1 Tax=Spirulina majo...	[more]
A0A5P8VR66_9NOSO	1.560e-216	87.04	Photosystem II protein D1 n=6 Tax=Cyanobacteria Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PRINTS	PR00256	REACTNCENTRE	coord: 161..187 score: 35.45 coord: 73..101 score: 27.75
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 1..283 e-value: 1.1E-88 score: 296.8
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..316
IPR000484	Photosynthetic reaction centre, L/M	PROSITE	PS00244	REACTION_CENTER	coord: 155..181
IPR005867	Photosystem II protein D1	TIGRFAM	TIGR01151	TIGR01151	coord: 1..324 e-value: 3.2E-215 score: 711.6
IPR005867	Photosystem II protein D1	HAMAP	MF_01379	PSII_PsbA_D1	coord: 1..311 score: 51.304
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	1.20.85.10		coord: 106..261 e-value: 3.1E-24 score: 87.5
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 1..307
None	No IPR available	PANTHER	PTHR33149:SF11		coord: 1..316
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 260..324
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 105..128
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 164..188
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 75..93
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 94..104
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 129..133
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 189..233
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 153..163
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 234..259
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 134..152
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.462
None	No IPR available	TMHMM	TMhelix		coord: 73..92
None	No IPR available	TMHMM	TMhelix		coord: 234..256
None	No IPR available	TMHMM	TMhelix		coord: 5..24
None	No IPR available	TMHMM	TMhelix		coord: 161..183
None	No IPR available	TMHMM	TMhelix		coord: 36..58
None	No IPR available	TMHMM	TMhelix		coord: 105..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig89	contig	P-fluviatile_contig89:32777..33751 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig89.14957.1	mRNA_P-fluviatile_contig89.14957.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig89 32756..33794 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig89.14957.1 ID=prot_P-fluviatile_contig89.14957.1|Name=mRNA_P-fluviatile_contig89.14957.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=325bp
MIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSS
NAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYR
LGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVF
QAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYG
YKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLT
ALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNA
HNFPLDLASNEILPVAVSAPAVVG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000484	Photo_RC_L/M
IPR005867	PSII_D1
IPR036854	Photo_II_D1/D2_sf