prot_P-fluviatile_contig87.14920.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig87.14920.1
Unique Nameprot_P-fluviatile_contig87.14920.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length269
Homology
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BLAST of mRNA_P-fluviatile_contig87.14920.1 vs. uniprot
Match: D8LKA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA3_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.930e-73
Identity = 173/276 (62.68%), Postives = 183/276 (66.30%), Query Frame = 0 
Query:    1 MGEFSQNRAAWLIAGFLGRKFMKDLLGRWSVLPVLAVACCLWNKWRSSQLEGKLEQAKLEEVRRSTRRQLQLLRTRSASGAPPSAGHSSERR------------PGDRLGGIPTSSLSTMPEQQRAQRQHLSPTAVXXXXXXXXXXXXXXXXXXXXXXXXXXVPAPKDALASELWAWLGGVGSGR-SCNADRPSRSRGGEGGAAAGGRG-AGEWRGAFHNRMGNLPRRNAFKTARGKVYLRDGRRGXXXXXSRSCLLA---GGLEPVREEDESGVA 259
            MGEF  NRAAWLIAGFLGRKFMKD LGRWSV+PVLAVA CLWNKWR+ QLEGKLEQ KLEEVRRSTRRQLQLLR                              PGDRLGGIP++S+ST                       XXXXXXXXXXXXXXXXXXXX  APKDALASELWAWLGGVGSGR SC+ADRP  S     G        +GEWRGAF+NRMGNLPRRNAFKTARGKVYLR GR G     +R  + A   GGL  VREEDE GVA
Sbjct:    1 MGEFGSNRAAWLIAGFLGRKFMKDFLGRWSVIPVLAVAACLWNKWRARQLEGKLEQCKLEEVRRSTRRQLQLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDRLGGIPSASISTXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXAAPKDALASELWAWLGGVGSGRRSCSADRPKCSSSPRSGXXXXXXXXSGEWRGAFYNRMGNLPRRNAFKTARGKVYLRGGRIGSGG--TREGVQAPPLGGLASVREEDE-GVA 263
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig87.14920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKA3_ECTSI2.930e-7362.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..268
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig87contigP-fluviatile_contig87:28765..32177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig87.14920.1mRNA_P-fluviatile_contig87.14920.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig87 27166..32177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig87.14920.1 ID=prot_P-fluviatile_contig87.14920.1|Name=mRNA_P-fluviatile_contig87.14920.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=269bp
MGEFSQNRAAWLIAGFLGRKFMKDLLGRWSVLPVLAVACCLWNKWRSSQL
EGKLEQAKLEEVRRSTRRQLQLLRTRSASGAPPSAGHSSERRPGDRLGGI
PTSSLSTMPEQQRAQRQHLSPTAVAAAAAAAAAASGSTDKKSSISAAAAA
VPAPKDALASELWAWLGGVGSGRSCNADRPSRSRGGEGGAAAGGRGAGEW
RGAFHNRMGNLPRRNAFKTARGKVYLRDGRRGGGGGSSRSCLLAGGLEPV
REEDESGVATATATAAAS*
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