prot_P-fluviatile_contig82.14803.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig82.14803.1
Unique Nameprot_P-fluviatile_contig82.14803.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length108
Homology
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: D7FPB1_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPB1_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 4.240e-58
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 0
Query:    1 MFSRVLSVMVCLLAGATAFMTPSVILRPVSRPTSSVQMADVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFTFTQ 107
            MFSRV+S+MVC+LAGA AFM PSV +R VSRPT+S+ MADVTFPGGKKTKAN G  LK VA+KAGY A YGCEEGKCGTCEHKVNGKK+RLCIGKLPAGAGPFTFTQ
Sbjct:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFTFTQ 107          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A835ZB30_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB30_9STRA)

HSP 1 Score: 119 bits (298), Expect = 8.310e-33
Identity = 63/109 (57.80%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    4 RVLSVMVC--LLAGATAFM---TPSVILRPVSRPTSSVQMADVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFTFTQ 107
            + L ++VC  LL   +AF+    PSV+  P     SS+ MA   FPGGKK +   G++LKAV  KA Y+APYGCEEGKCG+CEHKV GKKVRLCIGK+P G GP TFTQ
Sbjct:    4 KALLLLVCTALLGAVSAFVGTALPSVVRAP-----SSLYMAQCIFPGGKKAEGKPGEALKAVVAKAKYDAPYGCEEGKCGSCEHKVGGKKVRLCIGKVPPGNGPHTFTQ 107          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A4D9CYU4_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYU4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.970e-19
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0
Query:    1 MFSRVLSVMVCLLAGATAFMTPSVILRPVSR--PTSSVQMADVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHK-VNGKKVRLCIGKLPAGAGPFTF 105
            M  R++  ++ L+A  TAF  P      + R  P  +  + +V +PG KK KA  G++LKAVA +A Y   YGCEEGKCG+CEHK  +GKK R+CI K+P  AGP T 
Sbjct:    1 MMLRIVQALILLMA-TTAFFAPHAPSAGIKRGGPVYNGDV-EVIWPGNKKVKAKPGEALKAVAARARYTPNYGCEEGKCGSCEHKGSDGKKYRVCITKVPKIAGPLTL 106          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A7R9UCS5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCS5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.120e-18
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0
Query:   40 DVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPF 103
            +V FPGGKKT A +G+  K VA +AG+   YGC++G CG CE KVNGKKVR C+ K+PA   P 
Sbjct:   66 EVVFPGGKKTTAKAGEPFKNVAARAGFKPTYGCKQGSCGACEIKVNGKKVRPCVAKVPASNKPL 129          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A2D5MUZ7_9BACT (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MUZ7_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 2.340e-7
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0
Query:   45 GGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPA 98
            G K  +A     LK + K AG    + CE GKCGTCE++V+G+  RLC   +PA
Sbjct:   34 GSKTVQALPKQPLKKIVKAAGAPVKFNCENGKCGTCENRVDGRLTRLCTATVPA 87          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A7S4IHS5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IHS5_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 4.250e-7
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   40 DVTFP--GGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKK-VRLCIG-KLPAGA 100
            +VTFP  G K  KA  G+ + AV K+AG    + C+ G+CGTC+ ++NG+  +++C G  +P GA
Sbjct:   85 EVTFPQKGNKVVKAKQGEPIGAVCKRAGVRVKFDCKNGRCGTCQVRLNGRSALKVCQGGTVPGGA 149          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: B8C2R5_THAPS (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2R5_THAPS)

HSP 1 Score: 53.9 bits (128), Expect = 8.050e-7
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   57 LKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAG 99
            +  V   A    PY C+ G+CGTC  K+NG+K+R C+ K+P+G
Sbjct:   89 ISQVCNAARVKVPYNCQNGECGTCTVKMNGRKIRACVSKVPSG 131          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A6U3ZFR1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZFR1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.150e-6
Identity = 24/65 (36.92%), Postives = 33/65 (50.77%), Query Frame = 0
Query:   40 DVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFT 104
            +VT  G    KA     +  V   A    PY C+ G CGTC  K+NG++ + C+ K+PAG    T
Sbjct:   73 NVTVNGKAVPKAVVDQKISQVCASARVKVPYNCQNGDCGTCMVKINGRQAKACVSKVPAGKCAIT 137          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A7S0Q5Z4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5Z4_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 1.610e-6
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   40 DVTFP--GGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKV-RLCIGK-LPAGA 100
            +VTFP  G K  KA  GD++  V +KAG    + C+ G+CGTC+ ++NG+   ++C G  +P GA
Sbjct:   84 EVTFPQKGNKVVKAMQGDAIGKVCQKAGMRIKFDCKNGRCGTCQVRLNGRAAAKVCQGATIPGGA 148          
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: R1E6Z5_EMIHU (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E6Z5_EMIHU)

HSP 1 Score: 52.4 bits (124), Expect = 4.090e-6
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   40 DVTFP--GGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKV-RLCIGK-LPAGA 100
            +VTFP  G K   A  GD++  VA KAG    + C+ G+CGTC+ ++NG+   ++C G  +P GA
Sbjct:   79 EVTFPQKGNKVVYAQQGDNIGKVAAKAGLRIKFDCKNGRCGTCQVRLNGRAAAKVCQGATIPGGA 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FPB1_ECTSI4.240e-5882.242Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835ZB30_9STRA8.310e-3357.802Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9CYU4_9STRA1.970e-1946.302Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7R9UCS5_9STRA2.120e-1856.25Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2D5MUZ7_9BACT2.340e-744.442Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4IHS5_9EUKA4.250e-741.54Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
B8C2R5_THAPS8.050e-744.192Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A6U3ZFR1_9STRA1.150e-636.92Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S0Q5Z4_9EUKA1.610e-641.54Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
R1E6Z5_EMIHU4.090e-641.542Fe-2S ferredoxin-type domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 48..90
e-value: 1.7E-8
score: 34.3
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 27..97
e-value: 7.8E-10
score: 40.3
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 72..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..107
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..18
score: 0.723
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 43..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig82contigP-fluviatile_contig82:89795..92608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig82.14803.1mRNA_P-fluviatile_contig82.14803.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig82 88917..92608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig82.14803.1 ID=prot_P-fluviatile_contig82.14803.1|Name=mRNA_P-fluviatile_contig82.14803.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=108bp
MFSRVLSVMVCLLAGATAFMTPSVILRPVSRPTSSVQMADVTFPGGKKTK
ANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGA
GPFTFTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf