mRNA_P-fluviatile_contig82.14803.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: D7FPB1_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPB1_ECTSI) HSP 1 Score: 183 bits (464), Expect = 7.410e-54 Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 1
Query: 1 MFSRVLSVMVCLLAGATAFMTPSVILRPVSRPTSSVQMADVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFTFTQ 321
MFSRV+S+MVC+LAGA AFM PSV +R VSRPT+S+ MADVTFPGGKKTKAN G LK VA+KAGY A YGCEEGKCGTCEHKVNGKK+RLCIGKLPAGAGPFTFTQ
Sbjct: 1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFTFTQ 107
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A835ZB30_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB30_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.460e-29 Identity = 63/109 (57.80%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 10 RVLSVMVC--LLAGATAFM---TPSVILRPVSRPTSSVQMADVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFTFTQ 321
+ L ++VC LL +AF+ PSV+ P SS+ MA FPGGKK + G++LKAV KA Y+APYGCEEGKCG+CEHKV GKKVRLCIGK+P G GP TFTQ
Sbjct: 4 KALLLLVCTALLGAVSAFVGTALPSVVRAP-----SSLYMAQCIFPGGKKAEGKPGEALKAVVAKAKYDAPYGCEEGKCGSCEHKVGGKKVRLCIGKVPPGNGPHTFTQ 107
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A4D9CYU4_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYU4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 8.930e-17 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 1 MFSRVLSVMVCLLAGATAFMTPSVILRPVSR--PTSSVQMADVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHK-VNGKKVRLCIGKLPAGAGPFTF 315
M R++ ++ L+A TAF P + R P + + +V +PG KK KA G++LKAVA +A Y YGCEEGKCG+CEHK +GKK R+CI K+P AGP T
Sbjct: 1 MMLRIVQALILLMA-TTAFFAPHAPSAGIKRGGPVYNGDV-EVIWPGNKKVKAKPGEALKAVAARARYTPNYGCEEGKCGSCEHKGSDGKKYRVCITKVPKIAGPLTL 106
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A7R9UCS5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCS5_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 8.440e-16 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 118 DVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPF 309
+V FPGGKKT A +G+ K VA +AG+ YGC++G CG CE KVNGKKVR C+ K+PA P
Sbjct: 66 EVVFPGGKKTTAKAGEPFKNVAARAGFKPTYGCKQGSCGACEIKVNGKKVRPCVAKVPASNKPL 129
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A2D5MUZ7_9BACT (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MUZ7_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 7.950e-6 Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 1
Query: 133 GGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPA 294
G K +A LK + K AG + CE GKCGTCE++V+G+ RLC +PA
Sbjct: 34 GSKTVQALPKQPLKKIVKAAGAPVKFNCENGKCGTCENRVDGRLTRLCTATVPA 87
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A7S4IHS5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IHS5_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 1.750e-5 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 118 DVTFP--GGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKK-VRLCIG-KLPAGA 300
+VTFP G K KA G+ + AV K+AG + C+ G+CGTC+ ++NG+ +++C G +P GA
Sbjct: 85 EVTFPQKGNKVVKAKQGEPIGAVCKRAGVRVKFDCKNGRCGTCQVRLNGRSALKVCQGGTVPGGA 149
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: B8C2R5_THAPS (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2R5_THAPS) HSP 1 Score: 53.9 bits (128), Expect = 2.870e-5 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 169 LKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAG 297
+ V A PY C+ G+CGTC K+NG+K+R C+ K+P+G
Sbjct: 89 ISQVCNAARVKVPYNCQNGECGTCTVKMNGRKIRACVSKVPSG 131
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A6U3ZFR1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZFR1_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 3.990e-5 Identity = 24/65 (36.92%), Postives = 33/65 (50.77%), Query Frame = 1
Query: 118 DVTFPGGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKVRLCIGKLPAGAGPFT 312
+VT G KA + V A PY C+ G CGTC K+NG++ + C+ K+PAG T
Sbjct: 73 NVTVNGKAVPKAVVDQKISQVCASARVKVPYNCQNGDCGTCMVKINGRQAKACVSKVPAGKCAIT 137
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Match: A0A7S0Q5Z4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5Z4_9EUKA) HSP 1 Score: 53.5 bits (127), Expect = 5.850e-5 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 118 DVTFP--GGKKTKANSGDSLKAVAKKAGYNAPYGCEEGKCGTCEHKVNGKKV-RLCIGK-LPAGA 300
+VTFP G K KA GD++ V +KAG + C+ G+CGTC+ ++NG+ ++C G +P GA
Sbjct: 84 EVTFPQKGNKVVKAMQGDAIGKVCQKAGMRIKFDCKNGRCGTCQVRLNGRAAAKVCQGATIPGGA 148 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig82.14803.1 >prot_P-fluviatile_contig82.14803.1 ID=prot_P-fluviatile_contig82.14803.1|Name=mRNA_P-fluviatile_contig82.14803.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=108bp MFSRVLSVMVCLLAGATAFMTPSVILRPVSRPTSSVQMADVTFPGGKKTKback to top mRNA from alignment at P-fluviatile_contig82:88917..92608- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig82.14803.1 ID=mRNA_P-fluviatile_contig82.14803.1|Name=mRNA_P-fluviatile_contig82.14803.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3692bp|location=Sequence derived from alignment at P-fluviatile_contig82:88917..92608- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig82:88917..92608- >mRNA_P-fluviatile_contig82.14803.1 ID=mRNA_P-fluviatile_contig82.14803.1|Name=mRNA_P-fluviatile_contig82.14803.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=648bp|location=Sequence derived from alignment at P-fluviatile_contig82:88917..92608- (Porterinema fluviatile SAG_2381)back to top |