prot_P-fluviatile_contig82.14799.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig82.14799.1
Unique Nameprot_P-fluviatile_contig82.14799.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length75
Homology
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A6H5KTK4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTK4_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.620e-49
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPETD 74
            MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPETD
Sbjct:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPETD 74          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: F0YLY9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLY9_AURAN)

HSP 1 Score: 139 bits (349), Expect = 1.530e-41
Identity = 63/72 (87.50%), Postives = 68/72 (94.44%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPE 72
            MIIPVRCFTCGKVIGNKWE+YL LL+ADY+EGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYN+LERR   E
Sbjct:    1 MIIPVRCFTCGKVIGNKWESYLELLKADYSEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNTLERRVTQE 72          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A836CHW2_9STRA (DNA-directed RNA polymerase I, II, and III subunit RPABC5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHW2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 4.020e-41
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERR 68
            MIIPVRCFTCGKVIGNKWETYL LLQ+D +EGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYNSLERR
Sbjct:    1 MIIPVRCFTCGKVIGNKWETYLGLLQSDISEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNSLERR 68          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A8J2SAT8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAT8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.220e-40
Identity = 62/74 (83.78%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERR--TGPE 72
            MIIPVRCFTCGKV+GNKW++YL LL+ADY+EGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYN+LERR  T P+
Sbjct:    1 MIIPVRCFTCGKVVGNKWDSYLELLKADYSEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNTLERRVVTDPQ 74          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A7S1V7Q3_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1V7Q3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.930e-39
Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYN 63
            MIIPVRCFTCGKVIGNKWETYLSLLQADY+EGDALD+LGLKRYCCRRM+LTHVDLIEKLLNYN
Sbjct:   33 MIIPVRCFTCGKVIGNKWETYLSLLQADYSEGDALDELGLKRYCCRRMLLTHVDLIEKLLNYN 95          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A2P6TBS1_CHLSO (DNA-directed RNA polymerases and III subunit RPABC5 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TBS1_CHLSO)

HSP 1 Score: 132 bits (331), Expect = 1.440e-38
Identity = 58/67 (86.57%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLER 67
            MIIPVRCFTCGKVIGNKWETYL LLQA+Y+EGDA+D LGL RYCCRRM++THVDLIEKLLNYN+LER
Sbjct:    1 MIIPVRCFTCGKVIGNKWETYLDLLQAEYSEGDAMDALGLNRYCCRRMIMTHVDLIEKLLNYNTLER 67          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A087STN7_AUXPR (DNA-directed RNA polymerase subunit 10-like protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087STN7_AUXPR)

HSP 1 Score: 130 bits (328), Expect = 2.250e-38
Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLER 67
            MIIPVRCFTCGKVIGNKW+TYL LLQA+Y+EGDA+D LGL RYCCRRM++THVDLIEKLLNYN+LER
Sbjct:    1 MIIPVRCFTCGKVIGNKWDTYLDLLQAEYSEGDAMDALGLSRYCCRRMIMTHVDLIEKLLNYNTLER 67          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: B8C402_THAPS (DNA directed RNA polymerase II subunit, 8.2kDa, rpb10-like protein (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=B8C402_THAPS)

HSP 1 Score: 130 bits (327), Expect = 2.420e-38
Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNS 64
            MIIPVRCFTCGKVIGNKWETYL LLQADY+EGDALD+LGL+RYCCRRM+LTHVDLIEKLLNYN+
Sbjct:    1 MIIPVRCFTCGKVIGNKWETYLYLLQADYSEGDALDELGLRRYCCRRMMLTHVDLIEKLLNYNT 64          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: U5CY16_AMBTC (Uncharacterized protein n=11 Tax=Magnoliopsida TaxID=3398 RepID=U5CY16_AMBTC)

HSP 1 Score: 130 bits (326), Expect = 4.170e-38
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLER 67
            MIIPVRCFTCGKVIGNKW+TYL LLQADY EGDALD LGL RYCCRRM++THVDLIEKLLNYN+LE+
Sbjct:    1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK 67          
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A1U7YTW1_NELNU (DNA-directed RNA polymerases I, II, and III subunit RPABC5 n=29 Tax=Embryophyta TaxID=3193 RepID=A0A1U7YTW1_NELNU)

HSP 1 Score: 130 bits (326), Expect = 4.170e-38
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLER 67
            MIIPVRCFTCGKVIGNKW+TYL LLQADY EGDALD LGL RYCCRRM++THVDLIEKLLNYN+LE+
Sbjct:    1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK 67          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTK4_9PHAE1.620e-4998.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0YLY9_AURAN1.530e-4187.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836CHW2_9STRA4.020e-4192.65DNA-directed RNA polymerase I, II, and III subunit... [more]
A0A8J2SAT8_9STRA1.220e-4083.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1V7Q3_9STRA4.930e-3995.24Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A2P6TBS1_CHLSO1.440e-3886.57DNA-directed RNA polymerases and III subunit RPABC... [more]
A0A087STN7_AUXPR2.250e-3885.07DNA-directed RNA polymerase subunit 10-like protei... [more]
B8C402_THAPS2.420e-3890.63DNA directed RNA polymerase II subunit, 8.2kDa, rp... [more]
U5CY16_AMBTC4.170e-3886.57Uncharacterized protein n=11 Tax=Magnoliopsida Tax... [more]
A0A1U7YTW1_NELNU4.170e-3886.57DNA-directed RNA polymerases I, II, and III subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000268DNA-directed RNA polymerase, subunit N/Rpb10PIRSFPIRSF005653RpoN_RPB10coord: 1..72
e-value: 1.4E-33
score: 112.7
IPR000268DNA-directed RNA polymerase, subunit N/Rpb10PFAMPF01194RNA_pol_Ncoord: 1..59
e-value: 5.8E-34
score: 116.2
IPR000268DNA-directed RNA polymerase, subunit N/Rpb10PANTHERPTHR23431FAMILY NOT NAMEDcoord: 1..69
IPR000268DNA-directed RNA polymerase, subunit N/Rpb10HAMAPMF_00250RNApol_arch_Ncoord: 1..63
score: 20.017
NoneNo IPR availableGENE3D1.10.10.60coord: 1..70
e-value: 1.4E-40
score: 139.0
NoneNo IPR availablePANTHERPTHR23431:SF5coord: 1..69
NoneNo IPR availablePRODOMPD006539coord: 9..63
e-value: 2.0E-17
score: 213.0
IPR020789RNA polymerases, subunit N, zinc binding sitePROSITEPS01112RNA_POL_N_8KDcoord: 2..11
IPR023580RNA polymerase subunit RPB10SUPERFAMILY46924RNA polymerase subunit RPB10coord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig82contigP-fluviatile_contig82:48464..49708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig82.14799.1mRNA_P-fluviatile_contig82.14799.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig82 47493..49719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig82.14799.1 ID=prot_P-fluviatile_contig82.14799.1|Name=mRNA_P-fluviatile_contig82.14799.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=75bp
MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVL
THVDLIEKLLNYNSLERRTGPETD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000268RNAP_N/Rpb10
IPR020789RNA_pol_suN_Zn-BS
IPR023580RNA_pol_su_RPB10