mRNA_P-fluviatile_contig82.14799.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A6H5KTK4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTK4_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.890e-44 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPETD 233
MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPETD
Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPETD 74
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: F0YLY9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLY9_AURAN) HSP 1 Score: 137 bits (346), Expect = 9.980e-37 Identity = 63/72 (87.50%), Postives = 68/72 (94.44%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPE 227
MIIPVRCFTCGKVIGNKWE+YL LL+ADY+EGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYN+LERR E
Sbjct: 1 MIIPVRCFTCGKVIGNKWESYLELLKADYSEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNTLERRVTQE 72
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A836CHW2_9STRA (DNA-directed RNA polymerase I, II, and III subunit RPABC5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHW2_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.800e-36 Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERR 215
MIIPVRCFTCGKVIGNKWETYL LLQ+D +EGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYNSLERR
Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLGLLQSDISEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNSLERR 68
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A8J2SAT8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAT8_9STRA) HSP 1 Score: 135 bits (340), Expect = 7.390e-36 Identity = 60/68 (88.24%), Postives = 67/68 (98.53%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERR 215
MIIPVRCFTCGKV+GNKW++YL LL+ADY+EGDALD+LGLKRYCCRRMVLTHVDLIEKLLNYN+LERR
Sbjct: 1 MIIPVRCFTCGKVVGNKWDSYLELLKADYSEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNTLERR 68
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A7S1V7Q3_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1V7Q3_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.910e-34 Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYN 200
MIIPVRCFTCGKVIGNKWETYLSLLQADY+EGDALD+LGLKRYCCRRM+LTHVDLIEKLLNYN
Sbjct: 33 MIIPVRCFTCGKVIGNKWETYLSLLQADYSEGDALDELGLKRYCCRRMLLTHVDLIEKLLNYN 95
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A7S4B650_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B650_CHRCT) HSP 1 Score: 132 bits (332), Expect = 2.930e-34 Identity = 64/81 (79.01%), Postives = 69/81 (85.19%), Query Frame = 3
Query: 9 AMIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLERRTGPETD*HPATS 251
AMIIPVRCFTCGKVIGNK++ YL LLQADY EGDALD LGLKRYCCRRM+LTHVDLIEKLLNYN+LER + D HP S
Sbjct: 26 AMIIPVRCFTCGKVIGNKYDKYLELLQADYTEGDALDALGLKRYCCRRMLLTHVDLIEKLLNYNTLERGDA-QADDHPGGS 105
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A2P6TBS1_CHLSO (DNA-directed RNA polymerases and III subunit RPABC5 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TBS1_CHLSO) HSP 1 Score: 131 bits (329), Expect = 5.300e-34 Identity = 58/67 (86.57%), Postives = 64/67 (95.52%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLER 212
MIIPVRCFTCGKVIGNKWETYL LLQA+Y+EGDA+D LGL RYCCRRM++THVDLIEKLLNYN+LER
Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLDLLQAEYSEGDAMDALGLNRYCCRRMIMTHVDLIEKLLNYNTLER 67
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: A0A087STN7_AUXPR (DNA-directed RNA polymerase subunit 10-like protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087STN7_AUXPR) HSP 1 Score: 130 bits (326), Expect = 7.890e-34 Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLER 212
MIIPVRCFTCGKVIGNKW+TYL LLQA+Y+EGDA+D LGL RYCCRRM++THVDLIEKLLNYN+LER
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQAEYSEGDAMDALGLSRYCCRRMIMTHVDLIEKLLNYNTLER 67
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: B8C402_THAPS (DNA directed RNA polymerase II subunit, 8.2kDa, rpb10-like protein (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=B8C402_THAPS) HSP 1 Score: 129 bits (325), Expect = 8.380e-34 Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNS 203
MIIPVRCFTCGKVIGNKWETYL LLQADY+EGDALD+LGL+RYCCRRM+LTHVDLIEKLLNYN+
Sbjct: 1 MIIPVRCFTCGKVIGNKWETYLYLLQADYSEGDALDELGLRRYCCRRMMLTHVDLIEKLLNYNT 64
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Match: U5CY16_AMBTC (Uncharacterized protein n=11 Tax=Magnoliopsida TaxID=3398 RepID=U5CY16_AMBTC) HSP 1 Score: 129 bits (324), Expect = 1.420e-33 Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 3
Query: 12 MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLTHVDLIEKLLNYNSLER 212
MIIPVRCFTCGKVIGNKW+TYL LLQADY EGDALD LGL RYCCRRM++THVDLIEKLLNYN+LE+
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEK 67 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig82.14799.1 >prot_P-fluviatile_contig82.14799.1 ID=prot_P-fluviatile_contig82.14799.1|Name=mRNA_P-fluviatile_contig82.14799.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=75bp MIIPVRCFTCGKVIGNKWETYLSLLQADYNEGDALDDLGLKRYCCRRMVLback to top mRNA from alignment at P-fluviatile_contig82:47493..49719- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig82.14799.1 ID=mRNA_P-fluviatile_contig82.14799.1|Name=mRNA_P-fluviatile_contig82.14799.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2227bp|location=Sequence derived from alignment at P-fluviatile_contig82:47493..49719- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig82:47493..49719- >mRNA_P-fluviatile_contig82.14799.1 ID=mRNA_P-fluviatile_contig82.14799.1|Name=mRNA_P-fluviatile_contig82.14799.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=450bp|location=Sequence derived from alignment at P-fluviatile_contig82:47493..49719- (Porterinema fluviatile SAG_2381)back to top |