prot_P-fluviatile_contig80.14751.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig80.14751.1
Unique Nameprot_P-fluviatile_contig80.14751.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length453
Homology
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE)

HSP 1 Score: 541 bits (1393), Expect = 1.240e-188
Identity = 307/415 (73.98%), Postives = 337/415 (81.20%), Query Frame = 0
Query:   40 AVSAFGFGGGLPQQ-SLSRSLRWVGVAGRGEGQALHLARDAKLRSRAPAPPKDAEALPATGRRRSAFVVEGGG-HPAAASMTKDWRDLSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYADLL 452
            AV AFG+ G L QQ S SRSLR    AG G G           R R P+ P   +AL AT RRR+AFVVEGGG +P  +S T DWRDL+ EEET LCE I+ENRR+QDLQ+ELERK+SRPVTV EWAVAAGHPSAHQLMAALQEGRKAQRT+ LCHQGLVRSVA+RYKQ++R+LSL+DL QEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIA KDRLVRVPVHAQD AMRILAASHALQLE   G  PTDAQLA+AL +PEAS+ALYRKS LPQN+ADLD++ L+G                 VGGE+WPWE ++LAQA+VVRRDMMRAM ACLSP EERALRLRFGLG  EKEGA G  GGALTFKEIGRTMELSAEGIRKMVFR+IAKLQASDEAN LLLAYADL+
Sbjct:   39 AVCAFGYVGVLSQQQSSSRSLR---PAGGGRGGIR--------RPRVPSSPAQEKALFATARRRNAFVVEGGGANPVTSSSTADWRDLTKEEETALCELIVENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLES-GGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNSALSGSPQGRAAGGGSRGGR--VGGEQWPWEASQLAQAYVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 439          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI)

HSP 1 Score: 500 bits (1287), Expect = 1.970e-173
Identity = 269/349 (77.08%), Postives = 294/349 (84.24%), Query Frame = 0
Query:  106 VVEGGGHPAAASMTKDWRDLSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXX--VGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYADLL 452
            V  GG +P  +S T DWRDL+ EEET LCE IIENRR+QDLQ+ELERK+SRPVTV EWAVAAGHPSAHQLMAALQEGRKAQRT+ LCHQGLVRSVA+RYKQ++R+LSL+DL QEGNVGLL+AVEKFD TKGTRFSSYAVFRIKASVLRAIA KDRLVRVPVHAQD AMRILAASHALQLE   G  PTDAQLA+AL +PEAS+ALYRKS LPQN+ADLD+  L                     VGGE+WPWE ++LAQAHVVRRDMMRAM ACLSP EERALRLRFGLG  EKEGA  + GGALTFKEIGRTMELSAEGIRKMVFR+IAKLQASDEAN LLL+YADL+
Sbjct:   34 VRGGGANPVTSSSTTDWRDLTKEEETALCELIIENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLEAVEKFDSTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLES-GGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNPALPSSPQGRGGSGAAGGGSLGGRVGGEQWPWEASQLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYADLI 381          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A835ZDU2_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU2_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.260e-55
Identity = 135/332 (40.66%), Postives = 191/332 (57.53%), Query Frame = 0
Query:  124 DLSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYR----KSYLPQN-VADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYAD 450
            +L  + E  L   I E+ R+   Q +LE    R   V EWA AAG+  +  ++AAL+EG+KAQ  +V   + +VR++A +Y  IT+SL+L+DL+QEGN+GLL A +KFDP KG RF +YA FR+KASVLRAIA KDR +R+PVH QD A ++ +A+  LQ+    G PPTDA++A  L +  + +  +R    K  +  N V+D D    A                               A++ +V  D+ R +   L+P E  AL+LRFGL         G+A G LTFKE+G +M+ SAEGIR++V RA+ KL+   EA  LL  YA+
Sbjct:   46 ELDPDVENALYAAIREHSRIHAKQEQLECILGRSALVAEWASAAGYMDSMSMLAALREGQKAQTKLVKSQRAMVRAIAKKYAFITKSLTLDDLIQEGNLGLLSAADKFDPDKGARFGTYAAFRVKASVLRAIANKDRQIRIPVHIQDVAGKVRSATQRLQVT--LGRPPTDAEIAATLDMLPSEVTAHREMMDKEAVTVNAVSDRDVMAFAA-------------------------RATPQARSEMVE-DLKRVLELYLAPKEIEALQLRFGLD--------GQAAGPLTFKEVGGSMQTSAEGIRRIVSRALDKLR-EGEAWRLLSDYAE 340          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.780e-28
Identity = 109/313 (34.82%), Postives = 155/313 (49.52%), Query Frame = 0
Query:  144 QDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYR---KSYLPQ----NVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYA 449
            ++L + LER+ SR     EWA   G       +  ++  R A+ TM+  +  L  S+A RYK   R L+L DLVQEG+ GL++A E+FDP KG +FS+YA + IK S++RAIA + R +R+PVH  D    I  A+  L LE   G  PTD +L+L L +P   I  YR   +S L      N A    A   GG                      P    R  Q+ +  ++ M  +   LSP E+  +RLRFGL          + G A T +EIG+   ++ E +R++  RA+ KL+     N  L AYA
Sbjct:   94 EELAVRLERQPSRA----EWAAHMGVDEDTLKLIMIRSSR-AKTTMISANLRLAVSIAKRYKH--RGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLE--LGRTPTDEELSLRLQVPTQKIEFYREAARSVLSMEQSLNNARKGSAASLGGKSDMTLEDSLRDPE--------PLPEDRTQQSML--KENMSQLLGTLSPREQEVVRLRFGL----------DDGRARTLEEIGQVFCVTRERVRQIESRALQKLR-QPYRNHKLRAYA 376          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.990e-28
Identity = 103/325 (31.69%), Postives = 158/325 (48.62%), Query Frame = 0
Query:  125 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYA 449
            L  EEE  L  QI      +  + EL  +  R  ++ EWA   G       +  ++  R A+ TM+  +  L  S+A RY++  R L+L DL+QEG+ GL++A E+FDP KG +FS+YA + IK S++RAIA + R +R+PVH  D    +  A+  L LE   G  PTD +LA+ L +    I  YR +   Q+V  ++ +                         R P         H + ++ +  +   LSP E+  +RLRFGL          + G A T +EIG+   ++ E +R++  RA+ KL+     N  L AYA
Sbjct:   30 LKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSAR-AKSTMISANLRLAVSIAKRYRR--RGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLE--LGRHPTDEELAMRLQVTAQKIVFYRDA--AQSVLSMEQSRNFASRKGSGASQGGKSDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGL----------DDGRARTLEEIGQVFCVTRERVRQIESRALQKLR-QPYRNHKLRAYA 336          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.750e-28
Identity = 108/313 (34.50%), Postives = 167/313 (53.35%), Query Frame = 0
Query:  125 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIA-LYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 436
            L+ +EE +L   +    + ++++  LE + +RP T  EWA A G     +L   ++  ++A+  M+  +  LV S+A RY   T +LS++DL QEG++GL++AVEKFDP +G RFS+YA + IK SV+RAIA + R +R+PVH  D    +    H  +L    G  PT  ++A A  I    +  L++ S    +       G AG XXXXXXXX           E  P E A L+    + +D +  +   LS  E+  +R+RFGL          + G A T +EIG+   ++ E IR++  RA+ KL+
Sbjct:  187 LTAQEEVLLARHVQLLLKWEEVRERLEIELARPPTYAEWAAAVG-VDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNTLSVQDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQSRTIRLPVHIHDQLNTV--RKHKRELTGKLGRQPTTEEIAEAAGITVDKLQFLWKSSRETMSFEQEIRVGGAGXXXXXXXXXTVILSDSITDKEHMPEEKAALS----LMKDDIDRLLGTLSVREQDVIRMRFGL----------DDGKAKTLEEIGKRFRVTRERIRQIEARALHKLR 482          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: UPI0008F9CA57 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9CA57)

HSP 1 Score: 119 bits (299), Expect = 8.540e-27
Identity = 106/317 (33.44%), Postives = 155/317 (48.90%), Query Frame = 0
Query:  125 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSY-----LPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 436
            L+ EEE    +Q+ +  ++Q+++ EL   Q R  T+ EWA AA   S  QL   L  G  A+R MV  +  LV SVA +Y  I R++ L DL+QEG +G+ + VEKFDPTKG RFS+YA + I+ ++ RAIA K R +R+P+H  +   +I  A     L    G   T A+LA  L +    I  Y +       L Q V D  D  L                    G     + T    +A +   ++M+     L+P ++  L LRFGL          E G ALT  +IG  + +S E +R++   A+ KL+
Sbjct:   24 LTHEEEIYYGKQVQKFNQLQEVKKELTESQGREPTMSEWAAAADL-SVEQLQKQLARGEHAKRKMVEANLRLVVSVAKKY--IKRNVDLMDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQR--NLSQNLGRAATVAELAEELDLSPKQIREYLERARQPLSLEQRVGDNQDTELG-------------DLLEDTGPSPEDFATQSSLKADLT--ELMQD----LTPQQKEVLALRFGL----------EDGKALTLSKIGDRLNISRERVRQIEREALTKLR 306          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A5J4Z7E3_PORPP (RNA polymerase sigma factor SigA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7E3_PORPP)

HSP 1 Score: 122 bits (307), Expect = 1.090e-26
Identity = 109/358 (30.45%), Postives = 170/358 (47.49%), Query Frame = 0
Query:   98 TGRRRSAFVVEGGG-------HPAAASMTKDWRDLSVEE------ETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASI------ALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 436
            T RRRS     GG         PAA +M +    +S ++      E  L  Q+     +Q ++ +  RK  RPV ++EWA   G  +A  L  A+Q G +A+  +V  + GLV +VA +Y     +L+ +DLVQEG +GL++A EKFD  KG RFS+YA + I+AS++R +  ++R +RVP    D    +      + L   +G  PT+ +LA  L +    +       + + S + QNVA       A                  VG               +++ D+ R +   L+P E   +RLRFGL          E G   T +E+G+ ++LS E IR++VF A+ KL+
Sbjct:  176 TDRRRSGGGASGGHLRRNSSVGPAATAMRQYLAGISQDDLLERAQEIALANQVRALVDLQKVRSDAARKLGRPVPLNEWAEMVGM-TAQDLTLAMQLGTRAKNQLVTSNMGLVHNVAGKYAGKVETLTFQDLVQEGAMGLMRAAEKFDAKKGWRFSTYATWWIRASMMRCMDHQERSIRVPGPVLDQFRLVKKTFTVMSLR--KGREPTNEELAKELKLSTDKLRFILQSGVRKPSSVDQNVARSGSNDDAHKTLLDILRSDENVEENIVG--------------EMLKGDLDRVLRRYLNPQERGVVRLRFGL----------EDGHTRTLEEVGKALKLSRERIRQVVFTAMRKLR 506          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: UPI0019DF3EF8 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019DF3EF8)

HSP 1 Score: 119 bits (298), Expect = 1.150e-26
Identity = 108/317 (34.07%), Postives = 159/317 (50.16%), Query Frame = 0
Query:  125 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALY-RKSYLPQN----VADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 436
            L+ EEE VL + +     ++  +  LE K  R  T  EWA A+G  S   L AA++EG +A+R MV  +  LV SVA +Y  I R++ L DL+QEG +G+ + VEKFDPTKG RFS+YA + I+ ++ RAIA K R +R+P+H  +   +I  A    QL    G   T ++LA  L +    +  Y  KS  P +    V D  D  L+                        P E A  A    +RRD+ + M   L+P + + L LRFGL  G+           +T  +IG  + +S E +R++   A+ KL+
Sbjct:   23 LTHEEEIVLGKCVQRLTELERHREALEEKLGRSPTQAEWAEASGL-STQALAAAIREGEQAKRKMVEANLRLVVSVAKKY--IKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKRAQR--QLSQKHGRTATVSELAAELELSPKLVREYLEKSRQPLSLDLRVGDNQDTELSDLLEDDGPS---------------PEEFATQA---ALRRDLDKLMVD-LTPQQRQVLNLRFGLDDGQ----------TMTLAKIGEMLSISRERVRQIEREALTKLR 305          
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: Q39515_CYACA (Chloroplast RNA polymerase sigma subunit n=2 Tax=Cyanidiaceae TaxID=265316 RepID=Q39515_CYACA)

HSP 1 Score: 122 bits (307), Expect = 1.790e-26
Identity = 95/317 (29.97%), Postives = 153/317 (48.26%), Query Frame = 0
Query:  129 EETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGH-PSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVL 444
            EE  L +Q+     ++  Q     +  +  T  EWA   G+     +L   +++GRKA+  MV  +  LV S+A RY    R ++L+DL+QEG++GL++ VEKFD  +G RFS+YA + I+ S+ RAI+   R +R+PVH  DT   I   + ALQ+E   G PP++ ++  ++ I  A   L  +    +N+  L+    +G                       P E A    +    R+ +  +  CLS  E   +R+RFGL  G             T +E+G    ++ E IR++  +A+ KL+   E N L
Sbjct:  295 EEIELSKQVCILMDLEQFQRSFREEHGKSPTESEWAQGCGYGDDVEKLREHIRDGRKAKERMVTANLRLVVSIAKRYSN--RGVALQDLIQEGSIGLIRGVEKFDAERGFRFSTYATWWIRQSITRAISDSSRSIRLPVHVHDTISLIRKQTKALQVE--LGRPPSEEEICESVGIDRAKYRLVMEC--SRNIVSLETPLRSGDDVHFLGESLIA-----------PEERAEENCSRDTLRESIEKVLHCLSTREREVIRMRFGLTDGRPR----------TLEEVGSRFNVTRERIRQIESKALKKLRTPAENNFL 584          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMH8_9PHAE1.240e-18873.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPW8_ECTSI1.970e-17377.08RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A835ZDU2_9STRA3.260e-5540.66RNA_pol_sigma70 domain-containing protein n=1 Tax=... [more]
A0A835ZES3_9STRA2.780e-2834.82RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A835ZBY3_9STRA2.990e-2831.69RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S1B782_9STRA7.750e-2834.50Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
UPI0008F9CA578.540e-2733.44RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0A5J4Z7E3_PORPP1.090e-2630.45RNA polymerase sigma factor SigA n=1 Tax=Porphyrid... [more]
UPI0019DF3EF81.150e-2634.07RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
Q39515_CYACA1.790e-2629.97Chloroplast RNA polymerase sigma subunit n=2 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 215..228
score: 65.25
coord: 424..435
score: 33.87
coord: 239..247
score: 53.26
coord: 409..424
score: 32.58
IPR000943RNA polymerase sigma-70PROSITEPS00715SIGMA70_1coord: 215..228
NoneNo IPR availableGENE3D1.20.120.1810coord: 113..259
e-value: 1.1E-28
score: 102.6
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGBcoord: 118..442
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 118..442
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..452
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 34..45
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..33
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 361..449
e-value: 1.9E-9
score: 39.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 260..313
e-value: 1.3E-5
score: 27.1
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 185..436
e-value: 1.4E-22
score: 78.0
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 377..436
e-value: 5.3E-7
score: 29.1
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 190..260
e-value: 9.0E-17
score: 60.6
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 122..260
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 365..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig80contigP-fluviatile_contig80:393476..395542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig80.14751.1mRNA_P-fluviatile_contig80.14751.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig80 393413..396198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig80.14751.1 ID=prot_P-fluviatile_contig80.14751.1|Name=mRNA_P-fluviatile_contig80.14751.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=453bp
MEQRYSGGMRMAAARRRRRQYCVVGAAALFSACSGGVGSAVSAFGFGGGL
PQQSLSRSLRWVGVAGRGEGQALHLARDAKLRSRAPAPPKDAEALPATGR
RRSAFVVEGGGHPAAASMTKDWRDLSVEEETVLCEQIIENRRVQDLQLEL
ERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSV
AFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKAS
VLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALA
LSIPEASIALYRKSYLPQNVADLDDAGLAGGPGSTGSSGAAAGRGGRVGG
ERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGA
GGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYAD
LL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR036388WH-like_DNA-bd_sf
IPR014284RNA_pol_sigma-70_dom
IPR007630RNA_pol_sigma70_r4
IPR007627RNA_pol_sigma70_r2
IPR013325RNA_pol_sigma_r2
IPR013324RNA_pol_sigma_r3/r4-like