mRNA_P-fluviatile_contig80.14751.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE) HSP 1 Score: 541 bits (1395), Expect = 3.000e-185 Identity = 307/415 (73.98%), Postives = 337/415 (81.20%), Query Frame = 1
Query: 181 AVSAFGFGGGLPQQ-SLSRSLRWVGVAGRGEGQALHLARDAKLRSRAPAPPKDAEALPATGRRRSAFVVEGGG-HPAAASMTKDWRDLSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYADLL 1419
AV AFG+ G L QQ S SRSLR AG G G R R P+ P +AL AT RRR+AFVVEGGG +P +S T DWRDL+ EEET LCE I+ENRR+QDLQ+ELERK+SRPVTV EWAVAAGHPSAHQLMAALQEGRKAQRT+ LCHQGLVRSVA+RYKQ++R+LSL+DL QEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIA KDRLVRVPVHAQD AMRILAASHALQLE G PTDAQLA+AL +PEAS+ALYRKS LPQN+ADLD++ L+G VGGE+WPWE ++LAQA+VVRRDMMRAM ACLSP EERALRLRFGLG EKEGA G GGALTFKEIGRTMELSAEGIRKMVFR+IAKLQASDEAN LLLAYADL+
Sbjct: 39 AVCAFGYVGVLSQQQSSSRSLR---PAGGGRGGIR--------RPRVPSSPAQEKALFATARRRNAFVVEGGGANPVTSSSTADWRDLTKEEETALCELIVENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLES-GGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNSALSGSPQGRAAGGGSRGGR--VGGEQWPWEASQLAQAYVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 439
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI) HSP 1 Score: 501 bits (1289), Expect = 3.990e-170 Identity = 269/349 (77.08%), Postives = 294/349 (84.24%), Query Frame = 1
Query: 379 VVEGGGHPAAASMTKDWRDLSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXX--VGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYADLL 1419
V GG +P +S T DWRDL+ EEET LCE IIENRR+QDLQ+ELERK+SRPVTV EWAVAAGHPSAHQLMAALQEGRKAQRT+ LCHQGLVRSVA+RYKQ++R+LSL+DL QEGNVGLL+AVEKFD TKGTRFSSYAVFRIKASVLRAIA KDRLVRVPVHAQD AMRILAASHALQLE G PTDAQLA+AL +PEAS+ALYRKS LPQN+ADLD+ L VGGE+WPWE ++LAQAHVVRRDMMRAM ACLSP EERALRLRFGLG EKEGA + GGALTFKEIGRTMELSAEGIRKMVFR+IAKLQASDEAN LLL+YADL+
Sbjct: 34 VRGGGANPVTSSSTTDWRDLTKEEETALCELIIENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLEAVEKFDSTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLES-GGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNPALPSSPQGRGGSGAAGGGSLGGRVGGEQWPWEASQLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYADLI 381
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A835ZDU2_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU2_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.820e-53 Identity = 135/332 (40.66%), Postives = 191/332 (57.53%), Query Frame = 1
Query: 433 DLSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYR----KSYLPQN-VADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYAD 1413
+L + E L I E+ R+ Q +LE R V EWA AAG+ + ++AAL+EG+KAQ +V + +VR++A +Y IT+SL+L+DL+QEGN+GLL A +KFDP KG RF +YA FR+KASVLRAIA KDR +R+PVH QD A ++ +A+ LQ+ G PPTDA++A L + + + +R K + N V+D D A A++ +V D+ R + L+P E AL+LRFGL G+A G LTFKE+G +M+ SAEGIR++V RA+ KL+ EA LL YA+
Sbjct: 46 ELDPDVENALYAAIREHSRIHAKQEQLECILGRSALVAEWASAAGYMDSMSMLAALREGQKAQTKLVKSQRAMVRAIAKKYAFITKSLTLDDLIQEGNLGLLSAADKFDPDKGARFGTYAAFRVKASVLRAIANKDRQIRIPVHIQDVAGKVRSATQRLQVT--LGRPPTDAEIAATLDMLPSEVTAHREMMDKEAVTVNAVSDRDVMAFAA-------------------------RATPQARSEMVE-DLKRVLELYLAPKEIEALQLRFGLD--------GQAAGPLTFKEVGGSMQTSAEGIRRIVSRALDKLR-EGEAWRLLSDYAE 340
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.140e-27 Identity = 103/325 (31.69%), Postives = 158/325 (48.62%), Query Frame = 1
Query: 436 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYA 1410
L EEE L QI + + EL + R ++ EWA G + ++ R A+ TM+ + L S+A RY++ R L+L DL+QEG+ GL++A E+FDP KG +FS+YA + IK S++RAIA + R +R+PVH D + A+ L LE G PTD +LA+ L + I YR + Q+V ++ + R P H + ++ + + LSP E+ +RLRFGL + G A T +EIG+ ++ E +R++ RA+ KL+ N L AYA
Sbjct: 30 LKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSAR-AKSTMISANLRLAVSIAKRYRR--RGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLE--LGRHPTDEELAMRLQVTAQKIVFYRDA--AQSVLSMEQSRNFASRKGSGASQGGKSDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGL----------DDGRARTLEEIGQVFCVTRERVRQIESRALQKLR-QPYRNHKLRAYA 336
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.140e-27 Identity = 109/313 (34.82%), Postives = 155/313 (49.52%), Query Frame = 1
Query: 493 QDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYR---KSYLPQ----NVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVLLLAYA 1410
++L + LER+ SR EWA G + ++ R A+ TM+ + L S+A RYK R L+L DLVQEG+ GL++A E+FDP KG +FS+YA + IK S++RAIA + R +R+PVH D I A+ L LE G PTD +L+L L +P I YR +S L N A A GG P R Q+ + ++ M + LSP E+ +RLRFGL + G A T +EIG+ ++ E +R++ RA+ KL+ N L AYA
Sbjct: 94 EELAVRLERQPSRA----EWAAHMGVDEDTLKLIMIRSSR-AKTTMISANLRLAVSIAKRYKH--RGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLE--LGRTPTDEELSLRLQVPTQKIEFYREAARSVLSMEQSLNNARKGSAASLGGKSDMTLEDSLRDPE--------PLPEDRTQQSML--KENMSQLLGTLSPREQEVVRLRFGL----------DDGRARTLEEIGQVFCVTRERVRQIESRALQKLR-QPYRNHKLRAYA 376
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA) HSP 1 Score: 125 bits (315), Expect = 6.340e-27 Identity = 108/313 (34.50%), Postives = 167/313 (53.35%), Query Frame = 1
Query: 436 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIA-LYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 1371
L+ +EE +L + + ++++ LE + +RP T EWA A G +L ++ ++A+ M+ + LV S+A RY T +LS++DL QEG++GL++AVEKFDP +G RFS+YA + IK SV+RAIA + R +R+PVH D + H +L G PT ++A A I + L++ S + G AG XXXXXXXX E P E A L+ + +D + + LS E+ +R+RFGL + G A T +EIG+ ++ E IR++ RA+ KL+
Sbjct: 187 LTAQEEVLLARHVQLLLKWEEVRERLEIELARPPTYAEWAAAVG-VDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNTLSVQDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQSRTIRLPVHIHDQLNTV--RKHKRELTGKLGRQPTTEEIAEAAGITVDKLQFLWKSSRETMSFEQEIRVGGAGXXXXXXXXXTVILSDSITDKEHMPEEKAALS----LMKDDIDRLLGTLSVREQDVIRMRFGL----------DDGKAKTLEEIGKRFRVTRERIRQIEARALHKLR 482
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: UPI0008F9CA57 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9CA57) HSP 1 Score: 119 bits (299), Expect = 4.870e-26 Identity = 106/317 (33.44%), Postives = 155/317 (48.90%), Query Frame = 1
Query: 436 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSY-----LPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 1371
L+ EEE +Q+ + ++Q+++ EL Q R T+ EWA AA S QL L G A+R MV + LV SVA +Y I R++ L DL+QEG +G+ + VEKFDPTKG RFS+YA + I+ ++ RAIA K R +R+P+H + +I A L G T A+LA L + I Y + L Q V D D L G + T +A + ++M+ L+P ++ L LRFGL E G ALT +IG + +S E +R++ A+ KL+
Sbjct: 24 LTHEEEIYYGKQVQKFNQLQEVKKELTESQGREPTMSEWAAAADL-SVEQLQKQLARGEHAKRKMVEANLRLVVSVAKKY--IKRNVDLMDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQR--NLSQNLGRAATVAELAEELDLSPKQIREYLERARQPLSLEQRVGDNQDTELG-------------DLLEDTGPSPEDFATQSSLKADLT--ELMQD----LTPQQKEVLALRFGL----------EDGKALTLSKIGDRLNISRERVRQIEREALTKLR 306
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: UPI0019DF3EF8 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019DF3EF8) HSP 1 Score: 119 bits (298), Expect = 6.480e-26 Identity = 108/317 (34.07%), Postives = 159/317 (50.16%), Query Frame = 1
Query: 436 LSVEEETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALY-RKSYLPQN----VADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 1371
L+ EEE VL + + ++ + LE K R T EWA A+G S L AA++EG +A+R MV + LV SVA +Y I R++ L DL+QEG +G+ + VEKFDPTKG RFS+YA + I+ ++ RAIA K R +R+P+H + +I A QL G T ++LA L + + Y KS P + V D D L+ P E A A +RRD+ + M L+P + + L LRFGL G+ +T +IG + +S E +R++ A+ KL+
Sbjct: 23 LTHEEEIVLGKCVQRLTELERHREALEEKLGRSPTQAEWAEASGL-STQALAAAIREGEQAKRKMVEANLRLVVSVAKKY--IKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKRAQR--QLSQKHGRTATVSELAAELELSPKLVREYLEKSRQPLSLDLRVGDNQDTELSDLLEDDGPS---------------PEEFATQA---ALRRDLDKLMVD-LTPQQRQVLNLRFGLDDGQ----------TMTLAKIGEMLSISRERVRQIEREALTKLR 305
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: A0A5J4Z7E3_PORPP (RNA polymerase sigma factor SigA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7E3_PORPP) HSP 1 Score: 122 bits (307), Expect = 8.070e-26 Identity = 109/358 (30.45%), Postives = 170/358 (47.49%), Query Frame = 1
Query: 355 TGRRRSAFVVEGGG-------HPAAASMTKDWRDLSVEE------ETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGHPSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASI------ALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQ 1371
T RRRS GG PAA +M + +S ++ E L Q+ +Q ++ + RK RPV ++EWA G +A L A+Q G +A+ +V + GLV +VA +Y +L+ +DLVQEG +GL++A EKFD KG RFS+YA + I+AS++R + ++R +RVP D + + L +G PT+ +LA L + + + + S + QNVA A VG +++ D+ R + L+P E +RLRFGL E G T +E+G+ ++LS E IR++VF A+ KL+
Sbjct: 176 TDRRRSGGGASGGHLRRNSSVGPAATAMRQYLAGISQDDLLERAQEIALANQVRALVDLQKVRSDAARKLGRPVPLNEWAEMVGM-TAQDLTLAMQLGTRAKNQLVTSNMGLVHNVAGKYAGKVETLTFQDLVQEGAMGLMRAAEKFDAKKGWRFSTYATWWIRASMMRCMDHQERSIRVPGPVLDQFRLVKKTFTVMSLR--KGREPTNEELAKELKLSTDKLRFILQSGVRKPSSVDQNVARSGSNDDAHKTLLDILRSDENVEENIVG--------------EMLKGDLDRVLRRYLNPQERGVVRLRFGL----------EDGHTRTLEEVGKALKLSRERIRQVVFTAMRKLR 506
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Match: Q39515_CYACA (Chloroplast RNA polymerase sigma subunit n=2 Tax=Cyanidiaceae TaxID=265316 RepID=Q39515_CYACA) HSP 1 Score: 122 bits (307), Expect = 1.420e-25 Identity = 95/317 (29.97%), Postives = 153/317 (48.26%), Query Frame = 1
Query: 448 EETVLCEQIIENRRVQDLQLELERKQSRPVTVHEWAVAAGH-PSAHQLMAALQEGRKAQRTMVLCHQGLVRSVAFRYKQITRSLSLEDLVQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIAGKDRLVRVPVHAQDTAMRILAASHALQLEDPEGSPPTDAQLALALSIPEASIALYRKSYLPQNVADLDDAGLAGGXXXXXXXXXXXXXXXXVGGERWPWETARLAQAHVVRRDMMRAMAACLSPAEERALRLRFGLGAGEKEGAGGEAGGALTFKEIGRTMELSAEGIRKMVFRAIAKLQASDEANVL 1395
EE L +Q+ ++ Q + + T EWA G+ +L +++GRKA+ MV + LV S+A RY R ++L+DL+QEG++GL++ VEKFD +G RFS+YA + I+ S+ RAI+ R +R+PVH DT I + ALQ+E G PP++ ++ ++ I A L + +N+ L+ +G P E A + R+ + + CLS E +R+RFGL G T +E+G ++ E IR++ +A+ KL+ E N L
Sbjct: 295 EEIELSKQVCILMDLEQFQRSFREEHGKSPTESEWAQGCGYGDDVEKLREHIRDGRKAKERMVTANLRLVVSIAKRYSN--RGVALQDLIQEGSIGLIRGVEKFDAERGFRFSTYATWWIRQSITRAISDSSRSIRLPVHVHDTISLIRKQTKALQVE--LGRPPSEEEICESVGIDRAKYRLVMEC--SRNIVSLETPLRSGDDVHFLGESLIA-----------PEERAEENCSRDTLRESIEKVLHCLSTREREVIRMRFGLTDGRPR----------TLEEVGSRFNVTRERIRQIESKALKKLRTPAENNFL 584 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig80.14751.1 >prot_P-fluviatile_contig80.14751.1 ID=prot_P-fluviatile_contig80.14751.1|Name=mRNA_P-fluviatile_contig80.14751.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=453bp MEQRYSGGMRMAAARRRRRQYCVVGAAALFSACSGGVGSAVSAFGFGGGLback to top mRNA from alignment at P-fluviatile_contig80:393413..396198+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig80.14751.1 ID=mRNA_P-fluviatile_contig80.14751.1|Name=mRNA_P-fluviatile_contig80.14751.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2786bp|location=Sequence derived from alignment at P-fluviatile_contig80:393413..396198+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig80:393413..396198+ >mRNA_P-fluviatile_contig80.14751.1 ID=mRNA_P-fluviatile_contig80.14751.1|Name=mRNA_P-fluviatile_contig80.14751.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2718bp|location=Sequence derived from alignment at P-fluviatile_contig80:393413..396198+ (Porterinema fluviatile SAG_2381)back to top |