prot_P-fluviatile_contig80.14711.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig80.14711.1
Unique Name	prot_P-fluviatile_contig80.14711.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	156

Homology

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BLAST of mRNA_P-fluviatile_contig80.14711.1 vs. uniprot
Match: A0A6H5L1G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G3_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 7.070e-50
Identity = 101/159 (63.52%), Postives = 117/159 (73.58%), Query Frame = 0

Query:    1 MNAMWRSVVIVLALIISICTAFHVSPATSLART----AAERQFHSTQPDHVSSATWRAYPAAGARQTTSCRASMTAQGPGSSKSAQRVATVAGLTSVAILTGSAVPAHAENFAQYFAQGVVGAINGPGILAIPIILGFGLASAVAFFIYFFSQPREYDD 155
            M A WR V++ LA ++S CTAFHVSP TS  R     AA  +  +TQ  HV+  T RAY   GA +T++   SM A  P SSKSAQRVA VA + S A LTGSAVPAHA+NFA+YFA G+VG INGPGILAIPI+LG GLASA+AFFIYFFSQPREYDD
Sbjct:    2 MGATWRLVLLALAFVLSACTAFHVSP-TSFGRQPVGRAASLRPSATQSQHVAPFT-RAYRHTGASRTSTRGPSMAAGEPLSSKSAQRVAAVAAVASAATLTGSAVPAHADNFAEYFANGIVGTINGPGILAIPIVLGIGLASAIAFFIYFFSQPREYDD 158

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig80.14711.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig80.14711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L1G3_9PHAE	7.070e-50	63.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..124
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 148..155
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 125..147
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.932
None	No IPR available	TMHMM	TMhelix		coord: 125..147
None	No IPR available	TMHMM	TMhelix		coord: 7..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig80	contig	P-fluviatile_contig80:44150..45182 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig80.14711.1	mRNA_P-fluviatile_contig80.14711.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig80 44096..45182 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig80.14711.1 ID=prot_P-fluviatile_contig80.14711.1|Name=mRNA_P-fluviatile_contig80.14711.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=156bp
MNAMWRSVVIVLALIISICTAFHVSPATSLARTAAERQFHSTQPDHVSSA
TWRAYPAAGARQTTSCRASMTAQGPGSSKSAQRVATVAGLTSVAILTGSA
VPAHAENFAQYFAQGVVGAINGPGILAIPIILGFGLASAVAFFIYFFSQP
REYDD*