prot_P-fluviatile_contig8.14556.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig8.14556.1
Unique Name	prot_P-fluviatile_contig8.14556.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	356

Homology

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BLAST of mRNA_P-fluviatile_contig8.14556.1 vs. uniprot
Match: D8LIN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN3_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.430e-52
Identity = 165/357 (46.22%), Postives = 183/357 (51.26%), Query Frame = 0

Query:   12 MTLALAGSPLVGRHFKRTGKSSGSSALPAGSPRPSGTASALTAGESEIVLDRLEKEIATLLHAGRGAKKDTVRRRLRMGINEVTKFLEATAAAVTSHKSTCPSTSSPSRA-----PXXXXXXXXXXXXXXXXXXXXXXLSSPSPQSRFALQPAIVLVCRDVRPARLVEHVHALVSLTGTPHLVLSESSTSLGRVFGCKTMAALAICPASSPPPSHPSP-SPAG----------------------GRGAKAVTPQEQVGSRNSSNNIDSSGKGSNCSSIGKIGGGGVKAHGDGGDGGGGWTELEDGESRAGEVVANEREEAAGSGDGSGSDWVASDDHAAVDEDVDSFVEFLRRKVR 340
            MTLALAGSPLVGR+ KR GKS   ++ P GS    G A AL   ES+IVLDRL KEI TLL AG G+KKD  RRRLRMGINEVTKFLE+ AAA  +   T  S S  S                              L +P+P       PAIVL+CRDVRPARLVEHVHALV LT TP LVLSE S+SLG VFGCKTMAALAICPA +P P+  S  SP                         RGA A T + +   +      D  G+   CS      GGG                        G       E   G  DG G +   SDD  AVDEDVDSFVEFLRRKVR
Sbjct:    1 MTLALAGSPLVGRNVKRGGKSPKHASSP-GSSGTKGAALALETNESKIVLDRLGKEIVTLLQAG-GSKKDAARRRLRMGINEVTKFLESKAAAAAAPPKTPSSASRGSSINRQGISKASGKCDSAQAGAGAEVGARASLVAPAPPHT---PPAIVLICRDVRPARLVEHVHALVVLTATPFLVLSEPSSSLGGVFGCKTMAALAICPARTPRPAQTSSISPPXXXXXXXXXXXXXXXXXXXXXXRARGATAATGEGEGEEK------DVEGR-EGCS------GGGXXXX---------XXXXXXXXXXRGXXXXXXXE---GRRDGGG-EVTVSDDRVAVDEDVDSFVEFLRRKVR 326

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BLAST of mRNA_P-fluviatile_contig8.14556.1 vs. uniprot
Match: W7TQK6_9STRA (Ribosomal protein L7Ae/L8/Nhp2 family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQK6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.190e-5
Identity = 24/51 (47.06%), Postives = 38/51 (74.51%), Query Frame = 0

Query:  159 AIVLVCRDVRPARLVEHVHALVSLTGTPHLVLSESSTSLGRVFGCKTMAAL 209
            +++L+CRDVRPARLVEHV  L ++   P  +L +++++LG+  G K +AAL
Sbjct:  198 SLILICRDVRPARLVEHVAVLAAVRDVPFFLLPKATSALGQALGLKCIAAL 248

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig8.14556.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig8.14556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LIN3_ECTSI	3.430e-52	46.22	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
W7TQK6_9STRA	2.190e-5	47.06	Ribosomal protein L7Ae/L8/Nhp2 family n=1 Tax=Nann...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..355
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..23
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 159..211

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig8	contig	P-fluviatile_contig8:2629529..2632211 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig8.14556.1	mRNA_P-fluviatile_contig8.14556.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig8 2629223..2632413 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig8.14556.1 ID=prot_P-fluviatile_contig8.14556.1|Name=mRNA_P-fluviatile_contig8.14556.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=356bp
MSARAKKRVRPMTLALAGSPLVGRHFKRTGKSSGSSALPAGSPRPSGTAS
ALTAGESEIVLDRLEKEIATLLHAGRGAKKDTVRRRLRMGINEVTKFLEA
TAAAVTSHKSTCPSTSSPSRAPAEGEGSTTTCRRRNEKEGEGGGLSSPSP
QSRFALQPAIVLVCRDVRPARLVEHVHALVSLTGTPHLVLSESSTSLGRV
FGCKTMAALAICPASSPPPSHPSPSPAGGRGAKAVTPQEQVGSRNSSNNI
DSSGKGSNCSSIGKIGGGGVKAHGDGGDGGGGWTELEDGESRAGEVVANE
REEAAGSGDGSGSDWVASDDHAAVDEDVDSFVEFLRRKVRAAAPSAFAEQ
DPTGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029064	L30e-like