prot_P-fluviatile_contig8.14499.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14499.1
Unique Nameprot_P-fluviatile_contig8.14499.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1035
Homology
BLAST of mRNA_P-fluviatile_contig8.14499.1 vs. uniprot
Match: D7G646_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G646_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 7.320e-51
Identity = 139/312 (44.55%), Postives = 171/312 (54.81%), Query Frame = 0
Query:   20 SAFPASRLSRFIHAERRRRSTRTKSRSPPRNEPVAGHGSSARDLLGGEHGAAWGVLGWANVVLGRS-APAAAENTAT-------------GVTVSGFGGYGAGAVASSPHRGKS-AAREFTKLDQLDAGHLGRLAAHVLQRRRASDGWTCTCKQSNRAGVQQCEACFLARSQGKEDPGSSGCGGCGDYDDGERERET-----------------DNEAAGVKAVESGKGAEETTLSVREARLWRELSELRDLPVQDSLAVYPAGLDARAMTAMLQGENPLLLCGLMRFLMECDEAVALASDNHLNPLYAHAP 299
            S   A+R SRF+    R +S+R + RS    EP  G G  A  LLG +HG+AW +L W N V GRS AP A    AT             G T    GG G+ +  SS   G S  + EF+ LD LD GHLGRLA +VL+R ++S+ W C C QSNR   Q CE CF+ R +G    G  G  G    D    ER                   D   +    V   + AEE   S+REA LWR+L +LR+LP QDSLAV+PAGLDA AM AML G  P LL GL+RFLMECDEA+ +  D+HLNPLY+H+P
Sbjct:   13 SPVEAARRSRFVPEYHRPKSSRPRPRSALEKEPP-GSGDPASLLLGSDHGSAWDILQWVNTVFGRSPAPTATPAPATPAAPIGANVSRAAGATRDDTGGAGSSSPWSSRSPGGSHPSGEFSSLDSLDVGHLGRLAGYVLERLKSSERWICGCNQSNRPQAQFCELCFVPRPKGNLVGGGGGGFGRPRSDQPAGERAVKGWPLKGGGSSEKLVGGDERGSDQSKVVGSREAEEPKFSLREANLWRKLLQLRELPTQDSLAVFPAGLDATAMKAMLCGTEPRLLSGLVRFLMECDEALVMRQDDHLNPLYSHSP 323          
BLAST of mRNA_P-fluviatile_contig8.14499.1 vs. uniprot
Match: A0A6H5JL00_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL00_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 3.300e-28
Identity = 111/305 (36.39%), Postives = 144/305 (47.21%), Query Frame = 0
Query:   20 SAFPASRLSRFIHAERRRRSTRTKSRSPPRNEPVAGHGSSARDLLGGEHGAAWGVLGWANVVLGRSAPAAAENTATGVTVSGFGGYGAGAVASSPHRGKSAAREFTKLDQLDAGHLGRLAAHVLQRRRASDGWTCTCKQSNRAGVQQCEACFLARSQG----------------KEDPGSSGC--------GGCGDYDDGERERETD-NEAAGVKAVESGKGAEETTLSVREARLWRELSELRDLPVQDSLAVYPAGLDARAMTAMLQGENPLLLCGLMRFLMECDEAVALASDNHLNPLYAHAP 299
            S   A+R SRF+    R +S+R + RS    EP  G G  A  LLG EHG+AW +L W N +LGRS PA    +A              A  S+P                       + A+V +        T    + +  G   CE CF+ R +G                +  P             GG  +   G  ER +D NE AG +       AEE   S+REA LWR+L +L++LP QDSLAV+P GLD  AM AML G  P LL GL+RFLMECDEA+ +  D+HLNPLY+H+P
Sbjct:   13 SPVEAARRSRFVPEYHRPKSSRPRPRSALEKEPP-GSGDPASLLLGSEHGSAWDILQWVNTILGRS-PALTATSAP-------------ATPSAP-----------------------IGANVSR--------TAGATRDDTGGGGFCELCFVPRPKGNLVGGXXXXXXFGRPRRNRPAGERAVKGWPLKSGGSSEKLVGGDERGSDQNEVAGSRE------AEEPKFSLREANLWRKLLQLKELPTQDSLAVFPTGLDTVAMKAMLCGTEPRLLSGLVRFLMECDEALVMRQDDHLNPLYSHSP 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G646_ECTSI7.320e-5144.55Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JL00_9PHAE3.300e-2836.39Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2005227..2010196 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14499.1mRNA_P-fluviatile_contig8.14499.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 2005227..2010363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14499.1 ID=prot_P-fluviatile_contig8.14499.1|Name=mRNA_P-fluviatile_contig8.14499.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1035bp
MEEECTARSLNNSGPRLLSSAFPASRLSRFIHAERRRRSTRTKSRSPPRN
EPVAGHGSSARDLLGGEHGAAWGVLGWANVVLGRSAPAAAENTATGVTVS
GFGGYGAGAVASSPHRGKSAAREFTKLDQLDAGHLGRLAAHVLQRRRASD
GWTCTCKQSNRAGVQQCEACFLARSQGKEDPGSSGCGGCGDYDDGERERE
TDNEAAGVKAVESGKGAEETTLSVREARLWRELSELRDLPVQDSLAVYPA
GLDARAMTAMLQGENPLLLCGLMRFLMECDEAVALASDNHLNPLYAHAPL
SVGRKAPSSTRDASPGLACRSTPLPGSSVSPVIVSTAKAEPAGVSTWGSG
SGNGGEARSLRVGDPGGEGRRKPWDIGTSSSSSSSTESKASSVARCLPSP
RPSPLSSSIGAAVGGGPDAAGTDARAVGAPIAQAGAKAVLPVAKEVRMLA
SSGITKPETQQRQSLAGVISPRWSAQASAQAGSFDGPVANVGQGGSDGSG
GGGGGGTGKSYFTRPSAVRAAARAAAMAGRNPFPPPFLPTSQFDSSAPAS
SVASAPPPPSTLPPPPCNENTVPRPAADFSRSIPAAAVASTFSRPIARAE
AAPATAAAKDPALAAGEAGAHANAAATAGWREGAECPRHTWEKRASLFPV
AGSQNGATGSLRADTTATGRYGGGRRERRSTHEKFSSAKAMFEKRPAEPT
TEHKDSGCSSSGDAGGGLPSRRDYSVDERHARAKPGPSQMGEDGEKERAP
SQETREDCLAAEAEQPASDPDFEAQQRVGGAWADEPSARRRQSPTPAAGA
NGERRSGADGVHSDVGGFKDISVDDEKEKLTRGRIFEYGLLGPVSTEEES
EDKRGREQVDEAGPSNIEADEPTTLEPHGLSSPPSPCQGGTRAKSSPDMS
PPAVMQKLSFTAKRPGEGRAAPELATADEPSRLPAPGAFGVGHDGGSIVA
SAAASSQAPTASAKGEGVTAVDSPKSDEDADLEEATTASLVATTASAQPK
AHASALICATSSSSSSFRTTSSDGKGGATGTTTIT
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