prot_P-fluviatile_contig8.14449.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14449.1
Unique Nameprot_P-fluviatile_contig8.14449.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length338
Homology
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: D7G2P6_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2P6_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 5.500e-143
Identity = 203/229 (88.65%), Postives = 215/229 (93.89%), Query Frame = 0
Query:    7 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 235
            RRNTPRGQMSMGKGGPAIQMMEGAMRAMF+PPPPLEFKKSVCKRKPP VEG+AAMLKGKG  +LFEKG PPPPEKFETPRQ+HARIAAAKKK DEEGLK  I+ W+PK+D K KGDAYKTLFIAKISYDTTEKKLRREFEQ+G I ++RMVQD DGKPRGYAFVEYENEDDMR+AYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK+RPKKG EAEWRE
Sbjct:    3 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFEPPPPLEFKKSVCKRKPPTVEGVAAMLKGKGAANLFEKGVPPPPEKFETPRQKHARIAAAKKKTDEEGLKDKISKWNPKDDPKTKGDAYKTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQDEDGKPRGYAFVEYENEDDMRVAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKERPKKGHEAEWRE 231          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: H6WBA2_VAULI (RRM domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA2_VAULI)

HSP 1 Score: 258 bits (660), Expect = 2.860e-81
Identity = 131/225 (58.22%), Postives = 165/225 (73.33%), Query Frame = 0
Query:    7 RRNTPRGQMSMGKG-GPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQE 230
            R NTPRG MS G+  GPA+ M+   ++ MFDP PPL +K  + KR  P V G+           +FEK  PPP   +ETP+QRHAR+  AK + +E  ++  I  W+PK+D  A GDAYKTLF+A +SYDT+EKKLRREFEQYG I  +R+V DL+ +PRGYAF+EYE E+DM +AYK+ DGRK+D RR+LVDVERGRTVRNW PRRFGGGLG+SRK +PKKG+E
Sbjct:    3 RLNTPRGYMSQGRNSGPALGMLPPDLKPMFDPRPPLLWKPPINKRVAPYVTGLVKYK------DVFEKIPPPPIIPYETPKQRHARLREAKIRENEAKIEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVNDLEDQPRGYAFIEYEREEDMHMAYKKADGRKVDSRRLLVDVERGRTVRNWRPRRFGGGLGESRKTKPKKGEE 221          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A7S2Y0A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A0_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.690e-77
Identity = 128/219 (58.45%), Postives = 156/219 (71.23%), Query Frame = 0
Query:    6 GRRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDR 224
            GRR TP+G MS    GPAI  +   ++AMFDP PP+E K  + KRK P + G+A+ +       LFEK  PPP + +ETP+QR AR+  A  KA+ E L      +DP  +  A  DAYKTLFI+++SYDTTEKKLRREFEQYGPI  LR++ DL+ KPRGYAF+EY+ E DMR+AYKR DG KIDGRRVLVDVERGRTVR W PRR GGGLG +RK +
Sbjct:    3 GRRMTPKGMMSGNGSGPAIAHLPPGLKAMFDPRPPMEHKPPIIKRKMPSLAGMASYV------DLFEKTEPPPRQIYETPKQRQARVRDATMKANNEALALYAQEFDPHLNPHATEDAYKTLFISRLSYDTTEKKLRREFEQYGPIRNLRIILDLNDKPRGYAFIEYDRESDMRMAYKRADGCKIDGRRVLVDVERGRTVRGWCPRRLGGGLGGTRKSK 215          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A5D6XVV7_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVV7_9STRA)

HSP 1 Score: 228 bits (581), Expect = 5.090e-69
Identity = 125/231 (54.11%), Postives = 158/231 (68.40%), Query Frame = 0
Query:    7 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKK-KADEEGLKAMIATWDPKE-DGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 235
            R+ TP+GQMS    GPAI  +   ++A+F+P  PLEF+  + KRK P   GIAA  +       FE  APPP E  ETP++R  R+ A +  KAD E L A    WDP   D +   DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+   R+V+D DGK RGY FVEYENE D++ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK  P    +   RE
Sbjct:   14 RKMTPKGQMSNSGMGPAISHLPVHLKALFEPNAPLEFRPKLVKRKMPPYSGIAAFAE------QFEAEAPPPREVSETPKERRERVRAERMAKADAEML-ANKEKWDPNAPDERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKRARLVEDPDGKSRGYGFVEYENESDLKAAYKLADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRKGGPAVNVKYSGRE 237          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A8K1CMI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMI4_PYTOL)

HSP 1 Score: 227 bits (579), Expect = 6.520e-69
Identity = 117/230 (50.87%), Postives = 156/230 (67.83%), Query Frame = 0
Query:    7 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKE-DGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 235
            R+ TP+GQMS    GPAI  +   ++A+F+P PPLE    + KRK P   G+    +       FE   PPP E  ETP++R  R+   K +A E  L+A +  WDP+  D +   DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+  +R+++D +GK RGYAFVEYE E DM++AYK+ DG+KIDGRRV+VDVERGRTVR W PR+FGGG+G++RK  P    +   RE
Sbjct:    5 RKMTPKGQMSSSGMGPAIVHLPPHLKALFEPNPPLEHLPQLTKRKMPPYSGLTEFAE------TFETAQPPPREVSETPKERRERVRKEKVEAHEAQLQANLEKWDPQAADERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKKIRLIEDEEGKSRGYAFVEYEKESDMKVAYKQADGKKIDGRRVVVDVERGRTVREWKPRKFGGGIGETRKGGPDVNVKYSGRE 228          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A4D9D1Y9_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Y9_9STRA)

HSP 1 Score: 228 bits (581), Expect = 8.820e-69
Identity = 121/219 (55.25%), Postives = 150/219 (68.49%), Query Frame = 0
Query:    4 GGGRRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 222
            GG R  TP+GQMS     PAI  +   MRAMF+P PP+EF +   K  P    GI+          LFE   PP  E+F + ++R A   AA  K   E ++  +  WDPK+D KA  D YKTL +A++SYDTTEKKLRREFEQYGPI ++R+V D DGKPRGYAF+E+E E DM++AYKR DG+KIDGRR+LVDVERGRTV+ W+PRR GGGLG +RK
Sbjct:   27 GGVRLVTPKGQMSGSNMPPAITGLPQNMRAMFEPRPPVEFLRLAPKPPPRPYTGISQYA------GLFETDEPPARERFLSYKERKAAERAAFMKVHAEKVEMEVEDWDPKKDEKATEDPYKTLMVARLSYDTTEKKLRREFEQYGPIQSMRLVTDADGKPRGYAFIEFERESDMKMAYKRADGKKIDGRRILVDVERGRTVKGWVPRRLGGGLGGTRK 239          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: F0XZV6_AURAN (RRM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZV6_AURAN)

HSP 1 Score: 221 bits (564), Expect = 3.830e-68
Identity = 120/213 (56.34%), Postives = 143/213 (67.14%), Query Frame = 0
Query:   30 AMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKA-----KGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLD---------------GKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 222
            AM+AMF P PPL F++ + KR+P    G+AA         LFE  APP PEK ETPR+R A++ A K +A +  L   +A WDP++   A      GDAYKTLF+A++SYDTTEKKLRREFEQ+G I  LR+V + D               G PRGYAFVE+E E DMR AYKR DGRKIDGRRVLVDVERGRTVRNW PR+ GGGLG +RK
Sbjct:    4 AMKAMFQPGPPLLFREKISKRRPTPYTGVAAYR------DLFETTAPPEPEKNETPRERRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKLRREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYKRADGRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRK 210          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: K3X2C0_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2C0_GLOUD)

HSP 1 Score: 225 bits (573), Expect = 4.740e-68
Identity = 116/217 (53.46%), Postives = 153/217 (70.51%), Query Frame = 0
Query:    7 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPK-EDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 222
            R+ TP+GQMS    GPAI  +   ++A+F+P  PLEFK  + KRK P  EGIA+ L         E  APP     ETP++R  R+ A +   ++  ++A    WDP  ED +   DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+  +R+V+D +GK RGY FVEYENE D++ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK
Sbjct:    7 RKMTPKGQMSGSGMGPAISHLPVHLKALFEPNAPLEFKPKLVKRKMPPYEGIASFL------DQMETEAPPSRVVSETPKERKERLRAERMARNDAEMQANREKWDPNAEDARKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKKVRLVEDEEGKSRGYGFVEYENESDLKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 217          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: W7TPI8_9STRA (U1 small nuclear ribonucleoprotein 70 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPI8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.870e-66
Identity = 110/192 (57.29%), Postives = 138/192 (71.88%), Query Frame = 0
Query:   31 MRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 222
            MRAMF+P PP+EF +   K  P    GI+  +       LFE   PPP E+F + ++R A   AA  K   E ++  +  WDPK+D KA  D YKTL +A++SYDTTEKKLRREFEQYGPI ++R+V D DGKPRGYAF+E+E E DM++AYKR DG+KIDGRR+LVDVERGRTV+ W+PRR GGGLG +RK
Sbjct:    1 MRAMFEPRPPVEFLRLAPKPPPRPYTGISQYV------GLFETDEPPPRERFLSYKERKAAERAALMKVHAEKVEMEVEDWDPKKDEKATEDPYKTLMVARLSYDTTEKKLRREFEQYGPIQSMRLVMDADGKPRGYAFIEFERESDMKMAYKRADGKKIDGRRILVDVERGRTVKGWVPRRLGGGLGGTRK 186          
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A6G0M502_9STRA (RRM domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M502_9STRA)

HSP 1 Score: 218 bits (555), Expect = 3.410e-66
Identity = 114/217 (52.53%), Postives = 148/217 (68.20%), Query Frame = 0
Query:    7 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPK-EDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 222
            R+ TP+GQMS    GPAI  +   ++ MF+P  PL+    + KRK P   G+AA L        FE   PPP    ETP++R  R    K  A E  ++   A WDP  ED +   DAYKTLF+ +ISY+TTE++LR EFEQYGP+ ++R+V+D +GK RGY FVEYE E+DM+ AYK  DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK
Sbjct:    8 RKMTPKGQMSSSGMGPAIMHLPTHLKVMFEPNAPLDHLPRLVKRKMPPYTGLAAFL------DAFESETPPPRAVQETPKERRERRRQEKMAAVEAKMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 218          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2P6_ECTSI5.500e-14388.65RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
H6WBA2_VAULI2.860e-8158.22RRM domain-containing protein n=1 Tax=Vaucheria li... [more]
A0A7S2Y0A0_9STRA2.690e-7758.45Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A5D6XVV7_9STRA5.090e-6954.11RRM domain-containing protein n=1 Tax=Pythium bras... [more]
A0A8K1CMI4_PYTOL6.520e-6950.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9D1Y9_9STRA8.820e-6955.25RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
F0XZV6_AURAN3.830e-6856.34RRM domain-containing protein (Fragment) n=1 Tax=A... [more]
K3X2C0_GLOUD4.740e-6853.46RRM domain-containing protein n=1 Tax=Globisporang... [more]
W7TPI8_9STRA2.870e-6657.29U1 small nuclear ribonucleoprotein 70 n=1 Tax=Nann... [more]
A0A6G0M502_9STRA3.410e-6652.53RRM domain-containing protein n=1 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..274
NoneNo IPR availablePANTHERPTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDcoord: 30..335
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 126..198
e-value: 9.6E-23
score: 91.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 127..195
e-value: 2.6E-18
score: 65.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 125..202
score: 18.717
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 112..236
e-value: 5.5E-31
score: 109.4
IPR022023U1 small nuclear ribonucleoprotein of 70kDa N-terminalPFAMPF12220U1snRNP70_Ncoord: 33..116
e-value: 4.0E-13
score: 49.8
IPR040252U1 small nuclear ribonucleoprotein 70kDaPANTHERPTHR13952:SF5U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDAcoord: 30..335
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 113..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1535926..1542213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14449.1mRNA_P-fluviatile_contig8.14449.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 1535872..1542532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14449.1 ID=prot_P-fluviatile_contig8.14449.1|Name=mRNA_P-fluviatile_contig8.14449.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=338bp
MMSGGGRRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKR
KPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKAD
EEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGP
IATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVE
RGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRERERREAEAKEAEKEA
KREKERQEERARREKEKEEREKGRGGPPAASDKGRDDNGGSKRADSRERG
RRGGSRDRSRSRDGSRDRRKRSRSRDRRSSRSRDRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR022023U1snRNP70_N
IPR040252SNRNP70
IPR035979RBD_domain_sf