mRNA_P-fluviatile_contig8.14449.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: D7G2P6_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2P6_ECTSI) HSP 1 Score: 415 bits (1066), Expect = 1.030e-140 Identity = 203/229 (88.65%), Postives = 215/229 (93.89%), Query Frame = 1
Query: 73 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 759
RRNTPRGQMSMGKGGPAIQMMEGAMRAMF+PPPPLEFKKSVCKRKPP VEG+AAMLKGKG +LFEKG PPPPEKFETPRQ+HARIAAAKKK DEEGLK I+ W+PK+D K KGDAYKTLFIAKISYDTTEKKLRREFEQ+G I ++RMVQD DGKPRGYAFVEYENEDDMR+AYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK+RPKKG EAEWRE
Sbjct: 3 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFEPPPPLEFKKSVCKRKPPTVEGVAAMLKGKGAANLFEKGVPPPPEKFETPRQKHARIAAAKKKTDEEGLKDKISKWNPKDDPKTKGDAYKTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQDEDGKPRGYAFVEYENEDDMRVAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKERPKKGHEAEWRE 231
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: H6WBA2_VAULI (RRM domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA2_VAULI) HSP 1 Score: 258 bits (658), Expect = 2.850e-79 Identity = 131/225 (58.22%), Postives = 165/225 (73.33%), Query Frame = 1
Query: 73 RRNTPRGQMSMGKG-GPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQE 744
R NTPRG MS G+ GPA+ M+ ++ MFDP PPL +K + KR P V G+ +FEK PPP +ETP+QRHAR+ AK + +E ++ I W+PK+D A GDAYKTLF+A +SYDT+EKKLRREFEQYG I +R+V DL+ +PRGYAF+EYE E+DM +AYK+ DGRK+D RR+LVDVERGRTVRNW PRRFGGGLG+SRK +PKKG+E
Sbjct: 3 RLNTPRGYMSQGRNSGPALGMLPPDLKPMFDPRPPLLWKPPINKRVAPYVTGLVKYK------DVFEKIPPPPIIPYETPKQRHARLREAKIRENEAKIEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVNDLEDQPRGYAFIEYEREEDMHMAYKKADGRKVDSRRLLVDVERGRTVRNWRPRRFGGGLGESRKTKPKKGEE 221
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A7S2Y0A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A0_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.500e-75 Identity = 128/219 (58.45%), Postives = 156/219 (71.23%), Query Frame = 1
Query: 70 GRRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDR 726
GRR TP+G MS GPAI + ++AMFDP PP+E K + KRK P + G+A+ + LFEK PPP + +ETP+QR AR+ A KA+ E L +DP + A DAYKTLFI+++SYDTTEKKLRREFEQYGPI LR++ DL+ KPRGYAF+EY+ E DMR+AYKR DG KIDGRRVLVDVERGRTVR W PRR GGGLG +RK +
Sbjct: 3 GRRMTPKGMMSGNGSGPAIAHLPPGLKAMFDPRPPMEHKPPIIKRKMPSLAGMASYV------DLFEKTEPPPRQIYETPKQRQARVRDATMKANNEALALYAQEFDPHLNPHATEDAYKTLFISRLSYDTTEKKLRREFEQYGPIRNLRIILDLNDKPRGYAFIEYDRESDMRMAYKRADGCKIDGRRVLVDVERGRTVRGWCPRRLGGGLGGTRKSK 215
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A4D9D1Y9_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Y9_9STRA) HSP 1 Score: 228 bits (581), Expect = 3.550e-67 Identity = 121/219 (55.25%), Postives = 150/219 (68.49%), Query Frame = 1
Query: 64 GGGRRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 720
GG R TP+GQMS PAI + MRAMF+P PP+EF + K P GI+ LFE PP E+F + ++R A AA K E ++ + WDPK+D KA D YKTL +A++SYDTTEKKLRREFEQYGPI ++R+V D DGKPRGYAF+E+E E DM++AYKR DG+KIDGRR+LVDVERGRTV+ W+PRR GGGLG +RK
Sbjct: 27 GGVRLVTPKGQMSGSNMPPAITGLPQNMRAMFEPRPPVEFLRLAPKPPPRPYTGISQYA------GLFETDEPPARERFLSYKERKAAERAAFMKVHAEKVEMEVEDWDPKKDEKATEDPYKTLMVARLSYDTTEKKLRREFEQYGPIQSMRLVTDADGKPRGYAFIEFERESDMKMAYKRADGKKIDGRRILVDVERGRTVKGWVPRRLGGGLGGTRK 239
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A5D6XVV7_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVV7_9STRA) HSP 1 Score: 227 bits (579), Expect = 4.060e-67 Identity = 125/231 (54.11%), Postives = 158/231 (68.40%), Query Frame = 1
Query: 73 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKK-KADEEGLKAMIATWDPKE-DGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 759
R+ TP+GQMS GPAI + ++A+F+P PLEF+ + KRK P GIAA + FE APPP E ETP++R R+ A + KAD E L A WDP D + DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+ R+V+D DGK RGY FVEYENE D++ AYK DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK P + RE
Sbjct: 14 RKMTPKGQMSNSGMGPAISHLPVHLKALFEPNAPLEFRPKLVKRKMPPYSGIAAFAE------QFEAEAPPPREVSETPKERRERVRAERMAKADAEML-ANKEKWDPNAPDERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKRARLVEDPDGKSRGYGFVEYENESDLKAAYKLADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRKGGPAVNVKYSGRE 237
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A8K1CMI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMI4_PYTOL) HSP 1 Score: 226 bits (577), Expect = 5.170e-67 Identity = 117/230 (50.87%), Postives = 156/230 (67.83%), Query Frame = 1
Query: 73 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKE-DGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKDRPKKGQEAEWRE 759
R+ TP+GQMS GPAI + ++A+F+P PPLE + KRK P G+ + FE PPP E ETP++R R+ K +A E L+A + WDP+ D + DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+ +R+++D +GK RGYAFVEYE E DM++AYK+ DG+KIDGRRV+VDVERGRTVR W PR+FGGG+G++RK P + RE
Sbjct: 5 RKMTPKGQMSSSGMGPAIVHLPPHLKALFEPNPPLEHLPQLTKRKMPPYSGLTEFAE------TFETAQPPPREVSETPKERRERVRKEKVEAHEAQLQANLEKWDPQAADERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKKIRLIEDEEGKSRGYAFVEYEKESDMKVAYKQADGKKIDGRRVVVDVERGRTVREWKPRKFGGGIGETRKGGPDVNVKYSGRE 228
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: F0XZV6_AURAN (RRM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZV6_AURAN) HSP 1 Score: 221 bits (564), Expect = 1.460e-66 Identity = 120/213 (56.34%), Postives = 143/213 (67.14%), Query Frame = 1
Query: 142 AMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKA-----KGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLD---------------GKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 720
AM+AMF P PPL F++ + KR+P G+AA LFE APP PEK ETPR+R A++ A K +A + L +A WDP++ A GDAYKTLF+A++SYDTTEKKLRREFEQ+G I LR+V + D G PRGYAFVE+E E DMR AYKR DGRKIDGRRVLVDVERGRTVRNW PR+ GGGLG +RK
Sbjct: 4 AMKAMFQPGPPLLFREKISKRRPTPYTGVAAYR------DLFETTAPPEPEKNETPRERRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKLRREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYKRADGRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRK 210
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: K3X2C0_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2C0_GLOUD) HSP 1 Score: 224 bits (571), Expect = 3.690e-66 Identity = 116/217 (53.46%), Postives = 153/217 (70.51%), Query Frame = 1
Query: 73 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPK-EDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 720
R+ TP+GQMS GPAI + ++A+F+P PLEFK + KRK P EGIA+ L E APP ETP++R R+ A + ++ ++A WDP ED + DAYKTLF+ +ISY+TTEK+LR+EFEQYGP+ +R+V+D +GK RGY FVEYENE D++ AYK DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK
Sbjct: 7 RKMTPKGQMSGSGMGPAISHLPVHLKALFEPNAPLEFKPKLVKRKMPPYEGIASFL------DQMETEAPPSRVVSETPKERKERLRAERMARNDAEMQANREKWDPNAEDARKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKKVRLVEDEEGKSRGYGFVEYENESDLKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 217
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: W7TPI8_9STRA (U1 small nuclear ribonucleoprotein 70 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPI8_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.080e-64 Identity = 110/192 (57.29%), Postives = 138/192 (71.88%), Query Frame = 1
Query: 145 MRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPKEDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 720
MRAMF+P PP+EF + K P GI+ + LFE PPP E+F + ++R A AA K E ++ + WDPK+D KA D YKTL +A++SYDTTEKKLRREFEQYGPI ++R+V D DGKPRGYAF+E+E E DM++AYKR DG+KIDGRR+LVDVERGRTV+ W+PRR GGGLG +RK
Sbjct: 1 MRAMFEPRPPVEFLRLAPKPPPRPYTGISQYV------GLFETDEPPPRERFLSYKERKAAERAALMKVHAEKVEMEVEDWDPKKDEKATEDPYKTLMVARLSYDTTEKKLRREFEQYGPIQSMRLVMDADGKPRGYAFIEFERESDMKMAYKRADGKKIDGRRILVDVERGRTVKGWVPRRLGGGLGGTRK 186
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Match: A0A6G0M502_9STRA (RRM domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M502_9STRA) HSP 1 Score: 217 bits (553), Expect = 2.500e-64 Identity = 114/217 (52.53%), Postives = 148/217 (68.20%), Query Frame = 1
Query: 73 RRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRKPPKVEGIAAMLKGKGGDSLFEKGAPPPPEKFETPRQRHARIAAAKKKADEEGLKAMIATWDPK-EDGKAKGDAYKTLFIAKISYDTTEKKLRREFEQYGPIATLRMVQDLDGKPRGYAFVEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRK 720
R+ TP+GQMS GPAI + ++ MF+P PL+ + KRK P G+AA L FE PPP ETP++R R K A E ++ A WDP ED + DAYKTLF+ +ISY+TTE++LR EFEQYGP+ ++R+V+D +GK RGY FVEYE E+DM+ AYK DG+KIDGRRV+VDVERGRTVR+WLPR+FGGG+G++RK
Sbjct: 8 RKMTPKGQMSSSGMGPAIMHLPTHLKVMFEPNAPLDHLPRLVKRKMPPYTGLAAFL------DAFESETPPPRAVQETPKERRERRRQEKMAAVEAKMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14449.1 >prot_P-fluviatile_contig8.14449.1 ID=prot_P-fluviatile_contig8.14449.1|Name=mRNA_P-fluviatile_contig8.14449.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=338bp MMSGGGRRNTPRGQMSMGKGGPAIQMMEGAMRAMFDPPPPLEFKKSVCKRback to top mRNA from alignment at P-fluviatile_contig8:1535872..1542532+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14449.1 ID=mRNA_P-fluviatile_contig8.14449.1|Name=mRNA_P-fluviatile_contig8.14449.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6661bp|location=Sequence derived from alignment at P-fluviatile_contig8:1535872..1542532+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:1535872..1542532+ >mRNA_P-fluviatile_contig8.14449.1 ID=mRNA_P-fluviatile_contig8.14449.1|Name=mRNA_P-fluviatile_contig8.14449.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2028bp|location=Sequence derived from alignment at P-fluviatile_contig8:1535872..1542532+ (Porterinema fluviatile SAG_2381)back to top |