prot_P-fluviatile_contig8.14448.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14448.1
Unique Nameprot_P-fluviatile_contig8.14448.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length138
Homology
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BLAST of mRNA_P-fluviatile_contig8.14448.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.670e-19
Identity = 49/90 (54.44%), Postives = 58/90 (64.44%), Query Frame = 0 
Query:   57 RERERLMPTTRHFHAEVEVSLTCTRCSYSRRRRELYRDFSLDIPDPATRQPQENRGVDGGQGKRGI--------GAYGLDTLLEGFFKPA 138
            R++ERLMPTTRHFHAEVE +LTCT+CSYSRRRRELYRDFSLD+P+PA R                         G  GL  LL+ FF+P+
Sbjct:  635 RQKERLMPTTRHFHAEVEATLTCTKCSYSRRRRELYRDFSLDVPEPARRXXXXXXXXXXXXXXXXXXXXXXXDGGVSGLGDLLDSFFQPS 724
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BLAST of mRNA_P-fluviatile_contig8.14448.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 7.760e-19
Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 0 
Query:   57 RERERLMPTTRHFHAEVEVSLTCTRCSYSRRRRELYRDFSLDIPDPATR 105
            R++ERLMPTTRHFHAEVE +LTCT+CSYSRRRRELYRDFSLD+P+PA R
Sbjct:  735 RQKERLMPTTRHFHAEVEATLTCTKCSYSRRRRELYRDFSLDVPEPARR 783
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BLAST of mRNA_P-fluviatile_contig8.14448.1 vs. uniprot
Match: A0A7S0K999_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K999_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.710e-5
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:   62 LMPTTRHFHAEVEVSLTCTRCSYSRRRRELYRDFSLDI 99
            L PT R+F  EVEVSLTC  C Y+R R+ELYR  SLD+
Sbjct:  373 LFPTQRNFATEVEVSLTCCSCMYTRTRKELYRHLSLDV 410
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BLAST of mRNA_P-fluviatile_contig8.14448.1 vs. uniprot
Match: A0A835YKZ9_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ9_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.920e-5
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   62 LMPTTRHFHAEVEVSLTCTRCSYSRRRRELYRDFSLDI 99
            L+P+ R FHAEV++SL C  C Y+RRR E Y DFSLD+
Sbjct:  618 LLPSARAFHAEVDMSLRCRGCGYTRRRPEPYMDFSLDV 655
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2P5_ECTSI1.670e-1954.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUE2_9PHAE7.760e-1983.67USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S0K999_9STRA2.710e-563.16Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Lept... [more]
A0A835YKZ9_9STRA2.920e-560.53USP domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 11..137
e-value: 3.6E-6
score: 28.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1527944..1528603 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14448.1mRNA_P-fluviatile_contig8.14448.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 1527944..1528626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14448.1 ID=prot_P-fluviatile_contig8.14448.1|Name=mRNA_P-fluviatile_contig8.14448.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=138bp
MLKDEGGAGGRGSTPEAEPTAEAQVAATEEQGAGGEEVEPEDKREGEEEL
ASREQERERERLMPTTRHFHAEVEVSLTCTRCSYSRRRRELYRDFSLDIP
DPATRQPQENRGVDGGQGKRGIGAYGLDTLLEGFFKPA
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