prot_P-fluviatile_contig8.14418.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14418.1
Unique Nameprot_P-fluviatile_contig8.14418.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length55
Homology
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BLAST of mRNA_P-fluviatile_contig8.14418.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.230e-13
Identity = 39/85 (45.88%), Postives = 45/85 (52.94%), Query Frame = 0 
Query:    1 MTHAVETYLPGT-VHLHCLWHVMKN------------------------------ACSDAWMEILRHVKGVGGKCEPYINGYLMK 54
            MTHAVET+LP T VHL+CLWHVMKN                              ACSDAW EI RHVKG    CE Y+ G+L++
Sbjct:  211 MTHAVETFLPSTTVHLYCLWHVMKNVRKNCARALGKKASRFYRLLHAAAFAATEEACSDAWSEIFRHVKG--SDCEEYVTGHLLR 293
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BLAST of mRNA_P-fluviatile_contig8.14418.1 vs. uniprot
Match: D8LCW1_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW1_ECTSI)

HSP 1 Score: 47.4 bits (111), Expect = 1.800e-5
Identity = 22/39 (56.41%), Postives = 25/39 (64.10%), Query Frame = 0 
Query:    1 MTHAVETYLPGTVHLHCLWHVMKNACSDAWMEILRHVKG 39
            MT+A  T LP TVHLHCLWHVMKN        + +H KG
Sbjct:   28 MTNAARTLLPRTVHLHCLWHVMKN--------VRKHYKG 58
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEJ0_9PHAE1.230e-1345.88SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LCW1_ECTSI1.800e-556.41MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1212620..1213049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14418.1mRNA_P-fluviatile_contig8.14418.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 1212609..1213184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14418.1 ID=prot_P-fluviatile_contig8.14418.1|Name=mRNA_P-fluviatile_contig8.14418.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=55bp
MTHAVETYLPGTVHLHCLWHVMKNACSDAWMEILRHVKGVGGKCEPYING
YLMK*
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