prot_P-fluviatile_contig8.14412.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14412.1
Unique Nameprot_P-fluviatile_contig8.14412.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length403
Homology
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BLAST of mRNA_P-fluviatile_contig8.14412.1 vs. uniprot
Match: A0A6H5JQQ1_9PHAE (R3H domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ1_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 1.100e-137
Identity = 289/405 (71.36%), Postives = 318/405 (78.52%), Query Frame = 0 
Query:    4 MVAGRREFEIFVRNAQDEYITTIVVHGAAGREDDAASNSSPCAADVLPSRCVVEDYTRDASLLGARVGESPGAMTMVSVRDADKLKSFRSYLAGRKKAGVVKLPGGGEFFLLPTAADPRLVQGESIVGVIRGCGGFXXXXXXXXXXXXXXXXXXAVRSYSVATSSGASXXXXXXXXXXXXXXXXXQGGSXSGVGNXXXXXXXXXGPAPXXXV-IGGFLGSLMGSMDETYKGVAGTAAVDRANRAQEQAIRQRVSNFEAEVREKIEAFSTDPAAISHAFPHVEKSLRSIQHSLAEEFDGVTTRTEGELDDRRVVLYKLGFEPPEEEVQVDPQIHLGLARNMASSSSSVSTAPMPALDAKGAAAGGXXXXM------GADLVRIGTIVKDRRTVQEIEEDSRKRRRK 401
            M  GRR+ EIFVRNAQDEYITT+ +H + G         SP A+D LP RCVVEDYTRDAS++G R G   GA+T+V+VR+ADKLKSFRSYLAGRKKAGVVKLPGGG   LLPTAADPR V GESIVG+I+     XXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXX    X     XXXXXXXXX         +GGFLGSLMGSMD+T+K VAGTAAVDRANRAQ+QAI+QRVSNFEAEVREKI  FST+P AISH FPHVEKSLRSIQHSLAE+FDG+TTRTEGELDDRRVVLYKLG+EPPEEEVQVD Q+HLGLARN  SS+SS S APMPAL   G +AGGXXXX        ADLVRIGT+VKDRRTVQ+IEE+SRKRRR+
Sbjct:    1 MATGRRQIEIFVRNAQDEYITTVTLHSSGGDGHSXXXXXSPAASDALPLRCVVEDYTRDASVMGTRAG---GAVTLVAVRNADKLKSFRSYLAGRKKAGVVKLPGGGRLVLLPTAADPRDVSGESIVGLIQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAASLGGFLGSLMGSMDQTHKSVAGTAAVDRANRAQDQAIKQRVSNFEAEVREKIAVFSTNPEAISHTFPHVEKSLRSIQHSLAEDFDGITTRTEGELDDRRVVLYKLGYEPPEEEVQVDTQVHLGLARNTLSSASSASAAPMPAL---GGSAGGXXXXXXXXDVGSADLVRIGTVVKDRRTVQDIEEESRKRRRR 399
[Close]
BLAST of mRNA_P-fluviatile_contig8.14412.1 vs. uniprot
Match: D7G2L0_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L0_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 2.690e-72
Identity = 133/167 (79.64%), Postives = 146/167 (87.43%), Query Frame = 0 
Query:  240 VDRANRAQEQAIRQRVSNFEAEVREKIEAFSTDPAAISHAFPHVEKSLRSIQHSLAEEFDGVTTRTEGELDDRRVVLYKLGFEPPEEEVQVDPQIHLGLARNMASSSSSVSTAPMPALDAKGAAAGGXXXXM------GADLVRIGTIVKDRRTVQEIEEDSRKRRR 400
            VDRANRAQ+QAI+QRVSNFEAEVREKI  FST+P AISH FPHVEKSLRSIQHSLAE+FDG+TTRTEGELDDRRVVLYKLG+EPPEEEVQVD Q+H+GLARN  SS+SSVS APMPAL   G +AG XXXX        ADLVRIGT+VKDRRTVQ+IEE+SRKRRR
Sbjct:    4 VDRANRAQDQAIKQRVSNFEAEVREKIAVFSTNPEAISHTFPHVEKSLRSIQHSLAEDFDGITTRTEGELDDRRVVLYKLGYEPPEEEVQVDAQVHIGLARNTLSSASSVSAAPMPAL---GGSAGXXXXXXXXXDVGSADLVRIGTVVKDRRTVQDIEEESRKRRR 167
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQQ1_9PHAE1.100e-13771.36R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2L0_ECTSI2.690e-7279.64R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001374R3H domainSMARTSM00393R3H_4coord: 238..319
e-value: 1.5E-5
score: 34.5
IPR001374R3H domainPFAMPF01424R3Hcoord: 261..318
e-value: 3.5E-9
score: 36.5
IPR001374R3H domainPROSITEPS51061R3Hcoord: 245..320
score: 13.049
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 249..333
e-value: 4.3E-15
score: 57.4
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 261..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1199193..1204699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14412.1mRNA_P-fluviatile_contig8.14412.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 1198133..1204783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14412.1 ID=prot_P-fluviatile_contig8.14412.1|Name=mRNA_P-fluviatile_contig8.14412.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=403bp
MRGMVAGRREFEIFVRNAQDEYITTIVVHGAAGREDDAASNSSPCAADVL
PSRCVVEDYTRDASLLGARVGESPGAMTMVSVRDADKLKSFRSYLAGRKK
AGVVKLPGGGEFFLLPTAADPRLVQGESIVGVIRGCGGFGGGSAGTGATA
PQPPAPPAVRSYSVATSSGASSDAPPPSPPRRSGREEPQGGSSSGVGNGN
SDGGRKKGPAPAPAVIGGFLGSLMGSMDETYKGVAGTAAVDRANRAQEQA
IRQRVSNFEAEVREKIEAFSTDPAAISHAFPHVEKSLRSIQHSLAEEFDG
VTTRTEGELDDRRVVLYKLGFEPPEEEVQVDPQIHLGLARNMASSSSSVS
TAPMPALDAKGAAAGGVGVGMGADLVRIGTIVKDRRTVQEIEEDSRKRRR
KY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001374R3H_dom
IPR036867R3H_dom_sf