mRNA_P-fluviatile_contig8.14412.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14412.1 vs. uniprot
Match: A0A6H5JQQ1_9PHAE (R3H domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ1_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 1.110e-132 Identity = 289/405 (71.36%), Postives = 318/405 (78.52%), Query Frame = 1
Query: 94 MVAGRREFEIFVRNAQDEYITTIVVHGAAGREDDAASNSSPCAADVLPSRCVVEDYTRDASLLGARVGESPGAMTMVSVRDADKLKSFRSYLAGRKKAGVVKLPGGGEFFLLPTAADPRLVQGESIVGVIRGCGGFXXXXXXXXXXXXXXXXXXAVRSYSVATSSGASXXXXXXXXXXXXXXXXXQGGSXSGVGNXXXXXXXXXGPAPXXXV-IGGFLGSLMGSMDETYKGVAGTAAVDRANRAQEQAIRQRVSNFEAEVREKIEAFSTDPAAISHAFPHVEKSLRSIQHSLAEEFDGVTTRTEGELDDRRVVLYKLGFEPPEEEVQVDPQIHLGLARNMASSSSSVSTAPMPALDAKGAAAGGXXXXM------GADLVRIGTIVKDRRTVQEIEEDSRKRRRK 1287
M GRR+ EIFVRNAQDEYITT+ +H + G SP A+D LP RCVVEDYTRDAS++G R G GA+T+V+VR+ADKLKSFRSYLAGRKKAGVVKLPGGG LLPTAADPR V GESIVG+I+ XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX X XXXXXXXXX +GGFLGSLMGSMD+T+K VAGTAAVDRANRAQ+QAI+QRVSNFEAEVREKI FST+P AISH FPHVEKSLRSIQHSLAE+FDG+TTRTEGELDDRRVVLYKLG+EPPEEEVQVD Q+HLGLARN SS+SS S APMPAL G +AGGXXXX ADLVRIGT+VKDRRTVQ+IEE+SRKRRR+
Sbjct: 1 MATGRRQIEIFVRNAQDEYITTVTLHSSGGDGHSXXXXXSPAASDALPLRCVVEDYTRDASVMGTRAG---GAVTLVAVRNADKLKSFRSYLAGRKKAGVVKLPGGGRLVLLPTAADPRDVSGESIVGLIQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAASLGGFLGSLMGSMDQTHKSVAGTAAVDRANRAQDQAIKQRVSNFEAEVREKIAVFSTNPEAISHTFPHVEKSLRSIQHSLAEDFDGITTRTEGELDDRRVVLYKLGYEPPEEEVQVDTQVHLGLARNTLSSASSASAAPMPAL---GGSAGGXXXXXXXXDVGSADLVRIGTVVKDRRTVQDIEEESRKRRRR 399
BLAST of mRNA_P-fluviatile_contig8.14412.1 vs. uniprot
Match: D7G2L0_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L0_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.060e-68 Identity = 133/167 (79.64%), Postives = 146/167 (87.43%), Query Frame = 1
Query: 802 VDRANRAQEQAIRQRVSNFEAEVREKIEAFSTDPAAISHAFPHVEKSLRSIQHSLAEEFDGVTTRTEGELDDRRVVLYKLGFEPPEEEVQVDPQIHLGLARNMASSSSSVSTAPMPALDAKGAAAGGXXXXM------GADLVRIGTIVKDRRTVQEIEEDSRKRRR 1284
VDRANRAQ+QAI+QRVSNFEAEVREKI FST+P AISH FPHVEKSLRSIQHSLAE+FDG+TTRTEGELDDRRVVLYKLG+EPPEEEVQVD Q+H+GLARN SS+SSVS APMPAL G +AG XXXX ADLVRIGT+VKDRRTVQ+IEE+SRKRRR
Sbjct: 4 VDRANRAQDQAIKQRVSNFEAEVREKIAVFSTNPEAISHTFPHVEKSLRSIQHSLAEDFDGITTRTEGELDDRRVVLYKLGYEPPEEEVQVDAQVHIGLARNTLSSASSVSAAPMPAL---GGSAGXXXXXXXXXDVGSADLVRIGTVVKDRRTVQDIEEESRKRRR 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14412.1 >prot_P-fluviatile_contig8.14412.1 ID=prot_P-fluviatile_contig8.14412.1|Name=mRNA_P-fluviatile_contig8.14412.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=403bp MRGMVAGRREFEIFVRNAQDEYITTIVVHGAAGREDDAASNSSPCAADVLback to top mRNA from alignment at P-fluviatile_contig8:1198133..1204783- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14412.1 ID=mRNA_P-fluviatile_contig8.14412.1|Name=mRNA_P-fluviatile_contig8.14412.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6651bp|location=Sequence derived from alignment at P-fluviatile_contig8:1198133..1204783- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:1198133..1204783- >mRNA_P-fluviatile_contig8.14412.1 ID=mRNA_P-fluviatile_contig8.14412.1|Name=mRNA_P-fluviatile_contig8.14412.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2418bp|location=Sequence derived from alignment at P-fluviatile_contig8:1198133..1204783- (Porterinema fluviatile SAG_2381)back to top |