prot_P-fluviatile_contig8.14360.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14360.1
Unique Nameprot_P-fluviatile_contig8.14360.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length114
Homology
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: D8LG49_ECTSI (Succinate dehydrogenase assembly factor 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG49_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.450e-41
Identity = 79/116 (68.10%), Postives = 93/116 (80.17%), Query Frame = 0
Query:    1 MASRVTRSTVI-RLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQLRHQSGGVGRSLSEEDAADLSEEQREQLLRLKQQTLALSP--APGEAHGR 113
            MAS V R++V+ RLYKDILR H+FALP KHRELGDRYVRSEFKAHKEATG+QV+QFM AW  YL+QLR+Q G VGRSLS  D + L++EQR+QL+RLKQQ  +  P  A G A GR
Sbjct:    1 MASHVVRASVVKRLYKDILRQHRFALPPKHRELGDRYVRSEFKAHKEATGDQVAQFMHAWRSYLEQLRNQGGQVGRSLSAADVSHLNDEQRKQLVRLKQQASSSPPSSASGGAQGR 116          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: L1JE82_GUITC (Succinate dehydrogenase assembly factor 3 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JE82_GUITC)

HSP 1 Score: 82.8 bits (203), Expect = 2.810e-18
Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    1 MASRVTRSTVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQLRHQ--SGGVGRSLSEEDAADLSEEQREQLLRLKQQ 99
            MA   +R+ +I LY+ ILR H+  LP + +ELGD YVRSEFK HK+A   +V  F + W++YL  +  Q  SG  GR+L EE+AA L++EQ+E L RL+++
Sbjct:    1 MAEAFSRTAMISLYRKILRLHKRVLPNEMKELGDSYVRSEFKQHKKAKVGEVKVFARQWKEYLYTIEAQAASGTFGRNLREEEAAHLNQEQKENLKRLEEE 101          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A7S0W326_9CRYP (Succinate dehydrogenase assembly factor 3 n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W326_9CRYP)

HSP 1 Score: 82.4 bits (202), Expect = 8.250e-18
Identity = 45/102 (44.12%), Postives = 70/102 (68.63%), Query Frame = 0
Query:    1 MASRVTRSTVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQL--RHQSGGVGRSLSEEDAADLSEEQREQLLRLKQQT 100
            MAS  ++++++ LY+ +LR H+  LP++ +ELGD+Y RSEFKAHK A   QV QF+Q W++Y+  L  + Q G  GR L       +S+EQREQL +L++++
Sbjct:   27 MASAFSKTSMLNLYRSVLRIHKRVLPQEMKELGDKYARSEFKAHKTAKIGQVKQFVQQWKEYVYTLDIQAQKGAFGRDLDSSKMDKMSDEQREQLKQLEEES 128          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A836CAZ4_9STRA (Succinate dehydrogenase assembly factor 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAZ4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.650e-16
Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    1 MASRVTRSTVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQLRHQSGGVGRSLSEEDAADLSEEQREQLLRLKQQT 100
            M+S  +    ++LY+ IL  H+  LP  HR +GD+Y+++EFKAHK+A  E V  FM+ WE Y ++LR Q    GR L  ++   L+ EQ+++L  L+ +T
Sbjct:    1 MSSPSSNRAALKLYRSILHLHRTVLPASHRAVGDKYIKAEFKAHKDAKPEHVPPFMRGWETYKERLRMQQSQFGRDLRTDEQQSLTAEQQQKLEELRSRT 100          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A6T8KYE3_HEMAN (Succinate dehydrogenase assembly factor 3 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8KYE3_HEMAN)

HSP 1 Score: 78.2 bits (191), Expect = 4.210e-16
Identity = 42/102 (41.18%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    1 MASRVTRSTVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQL--RHQSGGVGRSLSEEDAADLSEEQREQLLRLKQQT 100
            MAS   +++++ LY+ +LR H+  LP++ +ELGD Y RSEFKAHK A   QV QF+Q W++Y+  L  + Q G  G+ L       +++EQR+QL +L++++
Sbjct:   32 MASAFNKTSMLNLYRSVLRIHKRVLPQEMKELGDMYARSEFKAHKSAKISQVKQFVQQWKEYVYTLDIQAQKGAFGKDLDATKLEKMNDEQRDQLKQLEEES 133          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A7S3X4S6_9SPIT (Succinate dehydrogenase assembly factor 3 n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X4S6_9SPIT)

HSP 1 Score: 75.9 bits (185), Expect = 1.510e-15
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   10 VIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQLRHQSGG---VGRSLSEEDAADLSEEQREQL 93
            +++LY+DI   H+ +LP  HR+LGD YVR EF+ H+ A  E +S+F + W DYL QLR Q+     +GRSLSEE+ A LS+EQR  L
Sbjct:    7 LLKLYRDIRVAHR-SLPAAHRKLGDAYVRQEFRQHRAAAPEFLSEFQRQWRDYLTQLRRQASRGDVLGRSLSEEEIAALSDEQRHSL 92          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A1X6P4M6_PORUM (Succinate dehydrogenase assembly factor 3 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4M6_PORUM)

HSP 1 Score: 75.9 bits (185), Expect = 3.770e-15
Identity = 49/105 (46.67%), Postives = 57/105 (54.29%), Query Frame = 0
Query:    7 RSTVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQLRHQSGG-VGRSLSEEDAADLSEEQREQLLRLKQQTLALSPAPGEA 110
            R  V+ LY+ +LR H   LP   R LGDRYVR EFKAHKE    Q   FMQ W++Y   L    GG VGR L    +  LSEEQ  +L  L     A SP  G+A
Sbjct:   24 RRDVLGLYRSLLRIHAAVLPAAQRALGDRYVREEFKAHKEVEPAQADAFMQTWQEYWVHLARARGGPVGRDLDGGTSEALSEEQTAKLDELAAAARAASPRLGDA 128          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A7S4MXT2_9EUKA (Succinate dehydrogenase assembly factor 3 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MXT2_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.120e-14
Identity = 42/98 (42.86%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    1 MASRVTRS-TVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQL-RHQSGGVGRSLSEEDAADLSEEQREQLLRL 96
            MA+++  S + ++LY+ +LR H+  LP  HRELGD YV++EF+ H++A    + QF + W DYL+Q+ R     VGR +S E+   LS+EQ+ QLL++
Sbjct:    4 MAAKLADSGSFVKLYRAVLRAHRTHLPAAHRELGDTYVKAEFRLHQDAKPAFLQQFERQWRDYLKQITRPNEEHVGRGMSAEEVEALSDEQKVQLLKI 101          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A7R9U9F8_9STRA (Succinate dehydrogenase assembly factor 3 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9F8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.970e-14
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 0
Query:    8 STVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQLRHQSGG-VGRSLSEEDAADLSEEQREQLLRLKQQT 100
            S  + LY+ IL+ H+  LP + R+LGDRYVR EF  HK A    +  F + WE+YL+ L  + GG VGR L+  + +++++EQR+QL +L+ QT
Sbjct:    5 SRAVLLYRQILKQHR-RLPSEMRQLGDRYVREEFGRHKNAEPRFLGPFYEQWEEYLKTLEQRQGGAVGRDLNLIEVSEMTDEQRQQLEKLRNQT 97          
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Match: A0A7S2G7W5_9STRA (Succinate dehydrogenase assembly factor 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7W5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.380e-12
Identity = 42/98 (42.86%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    8 STVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGEQVSQFMQAWEDYLQQLRHQSG--GVGRSLSEEDAADLSEEQREQLLRLKQQTLAL 103
            S  + LY+ ILR H+  LP + RELGD+YVRSEF+ H+ A+ E +  F   WE YL+ L+      G GR L EE +A +++EQ++ LL+L ++T ++
Sbjct:    2 SRALSLYRSILRGHR-TLPAEMRELGDKYVRSEFRQHQAASPEFLETFFSEWEGYLETLQTSDSKTGFGRPLGEEISA-MTDEQKQMLLKLAEETRSM 97          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG49_ECTSI1.450e-4168.10Succinate dehydrogenase assembly factor 3 n=2 Tax=... [more]
L1JE82_GUITC2.810e-1847.52Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A7S0W326_9CRYP8.250e-1844.12Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A836CAZ4_9STRA1.650e-1640.00Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A6T8KYE3_HEMAN4.210e-1641.18Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A7S3X4S6_9SPIT1.510e-1550.57Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A1X6P4M6_PORUM3.770e-1546.67Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A7S4MXT2_9EUKA1.120e-1442.86Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A7R9U9F8_9STRA3.970e-1443.62Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]
A0A7S2G7W5_9STRA1.380e-1242.86Succinate dehydrogenase assembly factor 3 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99
NoneNo IPR availablePFAMPF13233Complex1_LYR_2coord: 10..94
e-value: 1.7E-16
score: 60.7
IPR008381Succinate dehydrogenase assembly factor 3, mitochondrialPANTHERPTHR13137DC11 ACN9 HOMOLOGcoord: 7..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:723862..727039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14360.1mRNA_P-fluviatile_contig8.14360.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 723635..727755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14360.1 ID=prot_P-fluviatile_contig8.14360.1|Name=mRNA_P-fluviatile_contig8.14360.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=114bp
MASRVTRSTVIRLYKDILRHHQFALPRKHRELGDRYVRSEFKAHKEATGE
QVSQFMQAWEDYLQQLRHQSGGVGRSLSEEDAADLSEEQREQLLRLKQQT
LALSPAPGEAHGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008381SDHAF3/Sdh7