prot_P-fluviatile_contig8.14349.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14349.1
Unique Nameprot_P-fluviatile_contig8.14349.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length666
Homology
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Match: D8LG58_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG58_ECTSI)

HSP 1 Score: 604 bits (1557), Expect = 1.140e-205
Identity = 392/677 (57.90%), Postives = 456/677 (67.36%), Query Frame = 0
Query:    5 DDQARTQPLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQASTKTGVDPAADGQCVYPGRTLTGSTPWSGPEDD--WDNLQAASKIASDPYLRKLRKQEHLDLSRRGIGKHDLEGIAMKLRWLRGFTSVDLSSNNVDDACVQPLKSLLALRQLRRLDLSGNDLGPSAGKALFESLSRCKDIQVLRLESNVRFARVPGAGALIAGCLRAAVKAGGCRHLWSLSVTLDDFDSTFFMNAPRKMEKPSRLATP---GRAQGSSKAVAPPAPARQTPAHPM-NALALARAFHPRAPGGGAGPVLDGGSGHGEASNGGSAMIGTLATGS---GRGSITSLGLPYARLHLRTVEGLATHATPSLTHLDLSFCYVGAAGASALALALDGSAVHGVEPTSGAGKGSYMRGRGSRSLRSLKLPHNSVGDTGARALGRALSSNRCLXXXXXXXXXXXXXXXXXXXAALVCRDGGGGRRALLRLDVGDNPLGEKAVQLLVAAASS-------AGDCGAGDDDAVAAVQIVGLDRVAGATVTTREAARCIGAANEGLVPGKDGVGLAVSRTLVAIDEEVAVRSEDVKGEDGLVQVYQVQLHFRFETPADDIAKDMSGWRARNSTLDLQWNFASNISTCDPCEWRVIRLRVGEPEFTVKEGIGTEPGLAAGQTHSDGAEPREGYR 665
            +++ RTQPLLDSVRSLVNKERQLAGLQLEEK REAELW+ ++ +LQ  +  G+D AA       G T+   + W   E+D  WDNLQAASK A D YL KLR+QE LDLSRRGIGK DLEGI +KLRWLRGFTSVDL  NN+DDACVQPLKSL+ALRQL         LGPS+G AL ESLSRC+ +QVLRLE+N  FAR PGAGA +A  L+AA+KAGGCRHLWSLSVTLDDFD  FFMNAPRK +  +    P   G  + + KA  PP            NALALARAFHPRAP GGAG +L+   G  EA++ G  + G    GS   GRGSITSLGLPYARLH RTVE LA HA  SLTHLDLSFCY+G AGA ALA  LDG          G+ +GS   GRGSRSLRSL+LPHN+VGDTGA ALG++LSSNRC XXXXXXXXXXXXXXXXXX AA+  R   GG   L RLD+GDNPL  +A +LLVAAA+         G  G G       +Q++GLDR  GA V TREAA                       TLVAI  EV+V+ ED  G  GLVQVYQV L  RFE PAD+I     G + R +TLD++W+ A++    DPC WRV + R G+PE +VKEG+GTE G  +GQ + DG E R+GYR
Sbjct:   36 EEELRTQPLLDSVRSLVNKERQLAGLQLEEKEREAELWRDRFRQLQIESG-GIDSAAREA----GETIATES-WHRDEEDSDWDNLQAASKKAGDRYLGKLRRQESLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRGNNIDDACVQPLKSLMALRQLCXXXXXXXQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLKAAIKAGGCRHLWSLSVTLDDFDGNFFMNAPRKTKAKTAGGGPTATGTGRSTRKAAGPPPXXXXXXXXXXXNALALARAFHPRAPDGGAGALLNE-DGESEANSRG--VRGNTKRGSARVGRGSITSLGLPYARLHPRTVEELAAHAISSLTHLDLSFCYIGPAGAVALARGLDGH-------DGGSSRGSGTHGRGSRSLRSLQLPHNAVGDTGAHALGQSLSSNRCXXXXXXXXXXXXXXXXXXXAAAVGSRGNDGGGSVLTRLDMGDNPLEGEAARLLVAAATRQAPTDGHGGKDGDGTTRGATTLQVLGLDRALGAAVATREAAXXX-------XXXXXXXXXXXXXTLVAIGNEVSVQPEDAIGNGGLVQVYQVLLDSRFEMPADEIFTIRGGAKGRGATLDIEWSCATDW--LDPCWWRVSQTRKGQPELSVKEGVGTEEGWVSGQANHDGGELRDGYR 687          
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Match: A0A6H5K012_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K012_9PHAE)

HSP 1 Score: 578 bits (1489), Expect = 3.110e-195
Identity = 384/680 (56.47%), Postives = 448/680 (65.88%), Query Frame = 0
Query:   12 PLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQASTKTGVDPAADGQCVYPGRTLTGSTPWSGPEDDWD---NLQAASKIASDPYLRKLRKQEHLDLSRRGIGKHDLEGIAMKLRWLRGFTSVDLSSNNVDDACVQPLKSLLALRQLRRLDLSGNDLGPSAGKALFESLSRCKDIQVLRLESNVRFARVPGAGALIAGCLRAAVKAGGCRHLWSLSVTLDDFDSTFFMNAPRKMEKPSRLATPGRAQGSSKAVA-----PPAPARQTPAHPMNALALARAFHPRAPGGGAGPVLDGGSGHGEASNGGSAMIGTLATGS---GRGSITSLGLPYARLHLRTVEGLATHATPSLTHLDLSFCYVGAAGASALALALDGSAVHGVEPTSGAGKGSYMRGRGSRSLRSLKLPHNSVGDTGARALGRALSSNRCLXXXXXXXXXXXXXXXXXXXAALVCRDGGGGRRALLRLDVGDNPLGEKAVQLLVAAASS-------AGDCGAGDDDAVAAVQIVGLDRVAGATVTTREAARCIGAANEGLVPGKDGVGLAVSRTLVAIDEEVAVRSEDVKGEDGLVQV--------YQVQLHFRFETPADDIAKDMSGWRARNSTLDLQWNFASNISTCDPCEWRVIRLRVGEPEFTVKEGIGTEPGLAAGQTHSDGAEPREGYR 665
            PLL  +  LVNKERQLAGLQLEEK REAELW+ ++ +LQAS             V+          W    D+WD   NLQAASK A DPYL KLR+Q+ LDLSRRGIGK DLEGI +KLRWLRGFTSVDL  N++DD CVQPLKSL+ALRQL  LDL GN LGPS+G AL ESLSRC+ +QVLRLE+N  FAR PGAGA +A  LRAA+KAGGCR LWSLSVTLDDFD  FFMNAPRK +  +    P +A G+ +++      PPA          NALALARAFHPRAP GGAG  L+G  G  EA++ G  + G    GS   GRGSITSLGLPYARLH +TVE LA HA  SLT LDLSFCY+G AGA  LA ALDG           + +GS  RG+GSRSLRSLKLPHN+VGDTGA ALGR+LS+NRC XXXXXXXXXXXXXXXXXX AA+  R   GG   L RLD+GDNPL  +A +LLVAAA+         G  G G       +Q++GLDR  G  V TREA                      + TLV I  EV+V+ ED  G DGLVQV        YQV L  RFETPAD+I     G R R +TL++QW+FA++    DPC WRV + R G PEF+VKEG+G+E G  +GQ ++DGAE R+GYR
Sbjct:  106 PLL-FLEGLVNKERQLAGLQLEEKEREAELWRDRFRQLQASPFF----------VHV---------W----DEWDVQDNLQAASKKAGDPYLGKLRRQDSLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRDNSIDDTCVQPLKSLMALRQLCSLDLRGNQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLRAAIKAGGCRRLWSLSVTLDDFDGKFFMNAPRKTKAETAGGGP-KATGTGRSLRKAAGPPPAXXXXXXXXXXNALALARAFHPRAPDGGAGAFLNG-DGESEANSRG--VRGNTRRGSARVGRGSITSLGLPYARLHPKTVEELAAHAVSSLTSLDLSFCYIGPAGAVTLARALDGD-------DGSSRRGSGTRGQGSRSLRSLKLPHNAVGDTGAHALGRSLSNNRCXXXXXXXXXXXXXXXXXXXAAAVGSRGNDGGGSVLTRLDMGDNPLEGEAARLLVAAATCDAPTKGHGGTDGDGTTRGTTTLQVLGLDRALGTAVATREAXXXX-------XXXXXXXXXXTTTTLVTIGNEVSVQPEDAIGNDGLVQVGTRVNTMVYQVLLDSRFETPADEIFTIRGGARGRGATLEIQWSFATDW--LDPCWWRVSQTREGRPEFSVKEGVGSEEGWVSGQANNDGAEMRDGYR 741          
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Match: A0A7S2WJM3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.130e-18
Identity = 127/447 (28.41%), Postives = 199/447 (44.52%), Query Frame = 0
Query:    4 EDDQARTQPLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQASTKTGVDPAADGQCVYPGRTLTGSTPWSGPEDDWDNLQAASKIASDPYLRKLRKQEHLDLSRRGIGKHDLEGIAMKLRWLRGFTSVDLSSNNVDDACVQPLKSLLALRQLRRLDLSGNDLGPSAGKALFESLSRCKDIQVLRLESNVRFARVPGAGALIAGCLRAAVKAGGCRHLWSLSVTLDDFDSTFFMNAPRKMEKPSRLATPGRAQGSSKAVAPPAPARQTPAHPMNALALARAFHPRAPGGGAGPVLDGGSGHGEASNGGSAMIGTLATGSGRGSITSLGLPYARLHLRTVEGLAT----HATPSLTHLDLSFCYVGAAGASALALAL--DGSAVHGVE-PTSGAGKG-------SYMRGRGSRSLRSLKLPHNSVGDTGARALGRALSSNRCL 436
            E  +AR  PLLD V+ LV K+++L  L+LEE   +A  W++++ +L A+  T     A GQ   P R +   +    P    + L+     A    L+ L+  EHLDLS   +   DLE    +L  L     + L+   + D   + L+ LL    ++ +DLS N+LG     A+  +L R   +  L LE N   A  P  G  +   L  A +     +L SL VTLDD++S                A   +A+G +K         +    P+NA+   R                                 TL       ++++LGL  ARL L T++ L++        SLT+LDLSF ++G AGA+ALA AL   G  + G++ P +G G G       + ++ R + +L +L +  N + D+GA AL R + ++  L
Sbjct:   43 ESKEARDLPLLDQVQELVGKQKELMALELEEAQDKALHWKRQFEQLAATAATLQQ--AKGQ---PERGMAVHSAVGHPLSHRELLRLPLDTA---ILKILKGLEHLDLSDEPLKAKDLEAAIKRLPRLHRSPRLSLARAGLTDDLARTLQKLLEYSFIK-VDLSSNNLGAIGLAAVLTALPRRASVTELNLEDNQPLASTPLVGERLGNFLMDAYRYAP--NLCSLRVTLDDYNSP-------------GAAAAAKAKGGAK---------RRGKSPLNAVQFVRMLR---------------------------RADTL-------TLSNLGLVGARLSLETIKQLSSLLGERPGQSLTNLDLSFAFIGFAGATALASALRRPGCPLAGLQLPHNGLGSGGTEAICEALLKSR-NETLTTLNVRANQITDSGAEALRRLVLASTTL 421          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LG58_ECTSI1.140e-20557.90Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K012_9PHAE3.110e-19556.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WJM3_9STRA6.130e-1828.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..52
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 158..185
e-value: 0.002
score: 27.4
coord: 405..432
e-value: 0.0015
score: 27.8
coord: 467..494
e-value: 2.8
score: 14.0
coord: 355..382
e-value: 1.3
score: 16.2
coord: 433..460
e-value: 0.67
score: 18.4
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 316..554
coord: 107..235
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 101..492
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 316..497
e-value: 5.7E-25
score: 89.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 82..242
e-value: 1.6E-17
score: 65.2
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 159..179
e-value: 0.018
score: 15.0
coord: 405..426
e-value: 0.1
score: 12.7
coord: 356..377
e-value: 0.0029
score: 17.5
coord: 432..455
e-value: 0.027
score: 14.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:667524..671639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14349.1mRNA_P-fluviatile_contig8.14349.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 667524..671642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14349.1 ID=prot_P-fluviatile_contig8.14349.1|Name=mRNA_P-fluviatile_contig8.14349.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=666bp
MDEEDDQARTQPLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQ
ASTKTGVDPAADGQCVYPGRTLTGSTPWSGPEDDWDNLQAASKIASDPYL
RKLRKQEHLDLSRRGIGKHDLEGIAMKLRWLRGFTSVDLSSNNVDDACVQ
PLKSLLALRQLRRLDLSGNDLGPSAGKALFESLSRCKDIQVLRLESNVRF
ARVPGAGALIAGCLRAAVKAGGCRHLWSLSVTLDDFDSTFFMNAPRKMEK
PSRLATPGRAQGSSKAVAPPAPARQTPAHPMNALALARAFHPRAPGGGAG
PVLDGGSGHGEASNGGSAMIGTLATGSGRGSITSLGLPYARLHLRTVEGL
ATHATPSLTHLDLSFCYVGAAGASALALALDGSAVHGVEPTSGAGKGSYM
RGRGSRSLRSLKLPHNSVGDTGARALGRALSSNRCLTDLSLASNGIGFAG
GRALAAALVCRDGGGGRRALLRLDVGDNPLGEKAVQLLVAAASSAGDCGA
GDDDAVAAVQIVGLDRVAGATVTTREAARCIGAANEGLVPGKDGVGLAVS
RTLVAIDEEVAVRSEDVKGEDGLVQVYQVQLHFRFETPADDIAKDMSGWR
ARNSTLDLQWNFASNISTCDPCEWRVIRLRVGEPEFTVKEGIGTEPGLAA
GQTHSDGAEPREGYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt