mRNA_P-fluviatile_contig8.14349.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Match: D8LG58_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG58_ECTSI) HSP 1 Score: 605 bits (1560), Expect = 4.180e-206 Identity = 396/684 (57.89%), Postives = 460/684 (67.25%), Query Frame = 1
Query: 1 DMDEED--DQARTQPLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQASTKTGVDPAADGQCVYPGRTLTGSTPWSGPEDD--WDNLQAASKIASDPYLRKLRKQEHLDLSRRGIGKHDLEGIAMKLRWLRGFTSVDLSSNNVDDACVQPLKSLLALRQLRRLDLSGNDLGPSAGKALFESLSRCKDIQVLRLESNVRFARVPGAGALIAGCLRAAVKAGGCRHLWSLSVTLDDFDSTFFMNAPRKMEKPSRLATP---GRAQGSSKAVAPPAPARQTPAHPM-NALALARAFHPRAPGGGAGPVLDGGSGHGEASNGGSAMIGTLATGS---GRGSITSLGLPYARLHLRTVEGLATHATPSLTHLDLSFCYVGAAGASALALALDGSAVHGVEPTSGAGKGSYMRGRGSRSLRSLKLPHNSVGDTGARALGRALSSNRCLXXXXXXXXXXXXXXXXXXXAALVCRDGGGGRRALLRLDVGDNPLGEKAVQLLVAAASS-------AGDCGAGDDDAVAAVQIVGLDRVAGATVTTREAARCIGAANEGLVPGKDGVGLAVSRTLVAIDEEVAVRSEDVKGEDGLVQVYQVQLHFRFETPADDIAKDMSGWRARNSTLDLQWNFASNISTCDPCEWRVIRLRVGEPEFTVKEGIGTEPGLAAGQTHSDGAEPREGYR 1998
DM +ED ++ RTQPLLDSVRSLVNKERQLAGLQLEEK REAELW+ ++ +LQ + G+D AA G T+ + W E+D WDNLQAASK A D YL KLR+QE LDLSRRGIGK DLEGI +KLRWLRGFTSVDL NN+DDACVQPLKSL+ALRQL LGPS+G AL ESLSRC+ +QVLRLE+N FAR PGAGA +A L+AA+KAGGCRHLWSLSVTLDDFD FFMNAPRK + + P G + + KA PP NALALARAFHPRAP GGAG +L+ G EA++ G + G GS GRGSITSLGLPYARLH RTVE LA HA SLTHLDLSFCY+G AGA ALA LDG G+ +GS GRGSRSLRSL+LPHN+VGDTGA ALG++LSSNRC XXXXXXXXXXXXXXXXXX AA+ R GG L RLD+GDNPL +A +LLVAAA+ G G G +Q++GLDR GA V TREAA TLVAI EV+V+ ED G GLVQVYQV L RFE PAD+I G + R +TLD++W+ A++ DPC WRV + R G+PE +VKEG+GTE G +GQ + DG E R+GYR
Sbjct: 29 DMAQEDLEEELRTQPLLDSVRSLVNKERQLAGLQLEEKEREAELWRDRFRQLQIESG-GIDSAAREA----GETIATES-WHRDEEDSDWDNLQAASKKAGDRYLGKLRRQESLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRGNNIDDACVQPLKSLMALRQLCXXXXXXXQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLKAAIKAGGCRHLWSLSVTLDDFDGNFFMNAPRKTKAKTAGGGPTATGTGRSTRKAAGPPPXXXXXXXXXXXNALALARAFHPRAPDGGAGALLNE-DGESEANSRG--VRGNTKRGSARVGRGSITSLGLPYARLHPRTVEELAAHAISSLTHLDLSFCYIGPAGAVALARGLDGH-------DGGSSRGSGTHGRGSRSLRSLQLPHNAVGDTGAHALGQSLSSNRCXXXXXXXXXXXXXXXXXXXAAAVGSRGNDGGGSVLTRLDMGDNPLEGEAARLLVAAATRQAPTDGHGGKDGDGTTRGATTLQVLGLDRALGAAVATREAAXXX-------XXXXXXXXXXXXXTLVAIGNEVSVQPEDAIGNGGLVQVYQVLLDSRFEMPADEIFTIRGGAKGRGATLDIEWSCATDW--LDPCWWRVSQTRKGQPELSVKEGVGTEEGWVSGQANHDGGELRDGYR 687
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Match: A0A6H5K012_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K012_9PHAE) HSP 1 Score: 578 bits (1489), Expect = 3.220e-195 Identity = 384/680 (56.47%), Postives = 448/680 (65.88%), Query Frame = 1
Query: 37 PLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQASTKTGVDPAADGQCVYPGRTLTGSTPWSGPEDDWD---NLQAASKIASDPYLRKLRKQEHLDLSRRGIGKHDLEGIAMKLRWLRGFTSVDLSSNNVDDACVQPLKSLLALRQLRRLDLSGNDLGPSAGKALFESLSRCKDIQVLRLESNVRFARVPGAGALIAGCLRAAVKAGGCRHLWSLSVTLDDFDSTFFMNAPRKMEKPSRLATPGRAQGSSKAVA-----PPAPARQTPAHPMNALALARAFHPRAPGGGAGPVLDGGSGHGEASNGGSAMIGTLATGS---GRGSITSLGLPYARLHLRTVEGLATHATPSLTHLDLSFCYVGAAGASALALALDGSAVHGVEPTSGAGKGSYMRGRGSRSLRSLKLPHNSVGDTGARALGRALSSNRCLXXXXXXXXXXXXXXXXXXXAALVCRDGGGGRRALLRLDVGDNPLGEKAVQLLVAAASS-------AGDCGAGDDDAVAAVQIVGLDRVAGATVTTREAARCIGAANEGLVPGKDGVGLAVSRTLVAIDEEVAVRSEDVKGEDGLVQV--------YQVQLHFRFETPADDIAKDMSGWRARNSTLDLQWNFASNISTCDPCEWRVIRLRVGEPEFTVKEGIGTEPGLAAGQTHSDGAEPREGYR 1998
PLL + LVNKERQLAGLQLEEK REAELW+ ++ +LQAS V+ W D+WD NLQAASK A DPYL KLR+Q+ LDLSRRGIGK DLEGI +KLRWLRGFTSVDL N++DD CVQPLKSL+ALRQL LDL GN LGPS+G AL ESLSRC+ +QVLRLE+N FAR PGAGA +A LRAA+KAGGCR LWSLSVTLDDFD FFMNAPRK + + P +A G+ +++ PPA NALALARAFHPRAP GGAG L+G G EA++ G + G GS GRGSITSLGLPYARLH +TVE LA HA SLT LDLSFCY+G AGA LA ALDG + +GS RG+GSRSLRSLKLPHN+VGDTGA ALGR+LS+NRC XXXXXXXXXXXXXXXXXX AA+ R GG L RLD+GDNPL +A +LLVAAA+ G G G +Q++GLDR G V TREA + TLV I EV+V+ ED G DGLVQV YQV L RFETPAD+I G R R +TL++QW+FA++ DPC WRV + R G PEF+VKEG+G+E G +GQ ++DGAE R+GYR
Sbjct: 106 PLL-FLEGLVNKERQLAGLQLEEKEREAELWRDRFRQLQASPFF----------VHV---------W----DEWDVQDNLQAASKKAGDPYLGKLRRQDSLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRDNSIDDTCVQPLKSLMALRQLCSLDLRGNQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLRAAIKAGGCRRLWSLSVTLDDFDGKFFMNAPRKTKAETAGGGP-KATGTGRSLRKAAGPPPAXXXXXXXXXXNALALARAFHPRAPDGGAGAFLNG-DGESEANSRG--VRGNTRRGSARVGRGSITSLGLPYARLHPKTVEELAAHAVSSLTSLDLSFCYIGPAGAVTLARALDGD-------DGSSRRGSGTRGQGSRSLRSLKLPHNAVGDTGAHALGRSLSNNRCXXXXXXXXXXXXXXXXXXXAAAVGSRGNDGGGSVLTRLDMGDNPLEGEAARLLVAAATCDAPTKGHGGTDGDGTTRGTTTLQVLGLDRALGTAVATREAXXXX-------XXXXXXXXXXTTTTLVTIGNEVSVQPEDAIGNDGLVQVGTRVNTMVYQVLLDSRFETPADEIFTIRGGARGRGATLEIQWSFATDW--LDPCWWRVSQTREGRPEFSVKEGVGSEEGWVSGQANNDGAEMRDGYR 741
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Match: A0A7S2WJM3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM3_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 6.160e-18 Identity = 127/447 (28.41%), Postives = 199/447 (44.52%), Query Frame = 1
Query: 13 EDDQARTQPLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQASTKTGVDPAADGQCVYPGRTLTGSTPWSGPEDDWDNLQAASKIASDPYLRKLRKQEHLDLSRRGIGKHDLEGIAMKLRWLRGFTSVDLSSNNVDDACVQPLKSLLALRQLRRLDLSGNDLGPSAGKALFESLSRCKDIQVLRLESNVRFARVPGAGALIAGCLRAAVKAGGCRHLWSLSVTLDDFDSTFFMNAPRKMEKPSRLATPGRAQGSSKAVAPPAPARQTPAHPMNALALARAFHPRAPGGGAGPVLDGGSGHGEASNGGSAMIGTLATGSGRGSITSLGLPYARLHLRTVEGLAT----HATPSLTHLDLSFCYVGAAGASALALAL--DGSAVHGVE-PTSGAGKG-------SYMRGRGSRSLRSLKLPHNSVGDTGARALGRALSSNRCL 1311
E +AR PLLD V+ LV K+++L L+LEE +A W++++ +L A+ T A GQ P R + + P + L+ A L+ L+ EHLDLS + DLE +L L + L+ + D + L+ LL ++ +DLS N+LG A+ +L R + L LE N A P G + L A + +L SL VTLDD++S A +A+G +K + P+NA+ R TL ++++LGL ARL L T++ L++ SLT+LDLSF ++G AGA+ALA AL G + G++ P +G G G + ++ R + +L +L + N + D+GA AL R + ++ L
Sbjct: 43 ESKEARDLPLLDQVQELVGKQKELMALELEEAQDKALHWKRQFEQLAATAATLQQ--AKGQ---PERGMAVHSAVGHPLSHRELLRLPLDTA---ILKILKGLEHLDLSDEPLKAKDLEAAIKRLPRLHRSPRLSLARAGLTDDLARTLQKLLEYSFIK-VDLSSNNLGAIGLAAVLTALPRRASVTELNLEDNQPLASTPLVGERLGNFLMDAYRYAP--NLCSLRVTLDDYNSP-------------GAAAAAKAKGGAK---------RRGKSPLNAVQFVRMLR---------------------------RADTL-------TLSNLGLVGARLSLETIKQLSSLLGERPGQSLTNLDLSFAFIGFAGATALASALRRPGCPLAGLQLPHNGLGSGGTEAICEALLKSR-NETLTTLNVRANQITDSGAEALRRLVLASTTL 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14349.1 >prot_P-fluviatile_contig8.14349.1 ID=prot_P-fluviatile_contig8.14349.1|Name=mRNA_P-fluviatile_contig8.14349.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=666bp MDEEDDQARTQPLLDSVRSLVNKERQLAGLQLEEKAREAELWQKKYLELQback to top mRNA from alignment at P-fluviatile_contig8:667524..671642- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14349.1 ID=mRNA_P-fluviatile_contig8.14349.1|Name=mRNA_P-fluviatile_contig8.14349.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4119bp|location=Sequence derived from alignment at P-fluviatile_contig8:667524..671642- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:667524..671642- >mRNA_P-fluviatile_contig8.14349.1 ID=mRNA_P-fluviatile_contig8.14349.1|Name=mRNA_P-fluviatile_contig8.14349.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3996bp|location=Sequence derived from alignment at P-fluviatile_contig8:667524..671642- (Porterinema fluviatile SAG_2381)back to top |