prot_P-fluviatile_contig8.14344.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14344.1
Unique Nameprot_P-fluviatile_contig8.14344.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length353
Homology
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BLAST of mRNA_P-fluviatile_contig8.14344.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 8.710e-14
Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 0 
Query:  219 EGPGRDVPFEYADLLEAMTLPCSIQLFPRVERRSLVYVDGKEARSHRDKRYT 270
            E PG DVPFE+ADL +A +LPC+IQLFPRV+RRS+V+VDGKE+RS+R K+YT
Sbjct:  229 EDPGEDVPFEFADLHQATSLPCNIQLFPRVDRRSIVFVDGKESRSYRGKKYT 280
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ55_9PHAE8.710e-1471.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..353
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..32
NoneNo IPR availableTMHMMTMhelixcoord: 16..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:605850..607448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14344.1mRNA_P-fluviatile_contig8.14344.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 605850..607719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14344.1 ID=prot_P-fluviatile_contig8.14344.1|Name=mRNA_P-fluviatile_contig8.14344.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=353bp
MLRFKSGRRRKRRRPGTIATTAAAAAVCAFIVGRGPFAASTSISIDPGLG
SGPRRGQTRGAFVLAQQHSDGTSSWRRHGSSSVSSRGGWRWCEGSVKRHR
QHYPRPTCSALERDANSAAGAGAPSLGVTMAMRSLQQQEEQQQQQQQQQL
HGSVAVSDLRHGGHLDALEGRPRGVGWPEVLALRRRHRRPGHSSRKQDEG
LSRRDATRRRRRQLEKKPEGPGRDVPFEYADLLEAMTLPCSIQLFPRVER
RSLVYVDGKEARSHRDKRYTPATIDRREPTDTASPKAAATVVAAASAAAA
AGVQEALRRERIDVNCSGSLRAGGEMNPPPIAAAEAVVPAAAAAAIAVGV
VMA
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