prot_P-fluviatile_contig8.14339.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig8.14339.1
Unique Name	prot_P-fluviatile_contig8.14339.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	251

Homology

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BLAST of mRNA_P-fluviatile_contig8.14339.1 vs. uniprot
Match: D8LG66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG66_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 1.240e-105
Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 0

Query:   61 GALRRSTRFSAQSDSMYPDGVPRLPGIKTIVETEEEEGQRAVREWQDDGRKGRVLVRRKEVPSPEMDPASVCQLVFQSLQNNDDPMLDYGAAVAIKFASSKSAVKSMTPAEYGTFLRNDPELVLLVDNASCAPAERAKVSPDGRQILQKVEVVGRYPDNVRRIVDVQLSKE-DECWRVDAMTLRPVAEQR 249
            G  RRS+R  A+++ +YPDGVP LPGIKTIVETEEEE QRAVREWQDDGRKGRVLVRRKE+PSP MDPASVCQLVF+SLQNNDDPMLDYGAAVA+KFASSKSAV++MTPAEYG FLRNDP+ VLLVDNASCAPAERAKVS DG+Q+LQKVEVVGRYPD VRRIV+VQL+KE D+CWRVDAMT  P  EQR
Sbjct:   71 GHSRRSSRLLAETNGIYPDGVPNLPGIKTIVETEEEEEQRAVREWQDDGRKGRVLVRRKEIPSPAMDPASVCQLVFESLQNNDDPMLDYGAAVAVKFASSKSAVRNMTPAEYGAFLRNDPDQVLLVDNASCAPAERAKVSADGKQVLQKVEVVGRYPDVVRRIVEVQLTKEEDDCWRVDAMTFGPNVEQR 260

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BLAST of mRNA_P-fluviatile_contig8.14339.1 vs. uniprot
Match: A0A835YJS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS0_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.460e-6
Identity = 42/157 (26.75%), Postives = 69/157 (43.95%), Query Frame = 0

Query:  131 VCQLVFQSLQNNDDPMLDYGAAVAIKFA-------------------------------------SSKSAVKSMTPAEYGTFLRNDPELVLLVDNASCAPAERAKVSPDGRQILQKVEVVGRYPDNVRRIVDVQLSKED-----ECWRVDAMTLRPV 245
            VC  V ++LQ NDD    +GAA  +KFA                                     S  +A  ++TP++YG +LR   E  +L++N+    +   +++  G++ +Q+  VVG  P   +   D+QLS+ D     ECW +D +T   V
Sbjct:   22 VCNKVLRALQLNDDLTHGHGAAAMVKFALQRAFPSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXASPLNAAAALTPSQYGGYLRAG-EFEVLLENSRFGLSGPLRMAESGKRCVQRATVVGPPPALTKFEFDIQLSRTDVPEKGECWLIDTVTRHSV 177

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig8.14339.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig8.14339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LG66_ECTSI	1.240e-105	82.63	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YJS0_9STRA	1.460e-6	26.75	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..250
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	TMHMM	TMhelix		coord: 12..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig8	contig	P-fluviatile_contig8:570416..574258 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig8.14339.1	mRNA_P-fluviatile_contig8.14339.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig8 570373..575098 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig8.14339.1 ID=prot_P-fluviatile_contig8.14339.1|Name=mRNA_P-fluviatile_contig8.14339.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=251bp
MRILYIDCAYAAAVAAAAMVQSAAAFTLIAPPSTSRRSALLSMFTPAAAA
PVASTTSCMPGALRRSTRFSAQSDSMYPDGVPRLPGIKTIVETEEEEGQR
AVREWQDDGRKGRVLVRRKEVPSPEMDPASVCQLVFQSLQNNDDPMLDYG
AAVAIKFASSKSAVKSMTPAEYGTFLRNDPELVLLVDNASCAPAERAKVS
PDGRQILQKVEVVGRYPDNVRRIVDVQLSKEDECWRVDAMTLRPVAEQRT
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