prot_P-fluviatile_contig8.14333.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14333.1
Unique Nameprot_P-fluviatile_contig8.14333.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length948
Homology
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BLAST of mRNA_P-fluviatile_contig8.14333.1 vs. uniprot
Match: A0A6H5L777_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L777_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.410e-10
Identity = 83/228 (36.40%), Postives = 109/228 (47.81%), Query Frame = 0 
Query:  250 SPARARKPITRFYGTSPSLRP--------RRASSLPSPPRNV--AAAIDAEGAAYAGTTRGIVPRAAGSIARPSDDASSFSSSCTSARNVGGAGCAGSVVTAETMG------RQPTIDQLNDPVFRGRMKARARAASET-----AAAAMAAGGAEMGKAVSG-RCPRAARKEPTG---------RGKRSGGSXXXXXXXXXYGWISSRRQDWALDDVRCPSAPSAAAA 446
            SPAR + PI+  YG + S           +RAS++PSP R V  ++AI AE  +        V  +AG+I+ P+  A +  S  +S+  VG +G  G  V  E         ++ T DQLNDPVFRGRMK R RAA+       +       G   G A++G RC    R    G         +GKR  G           GW+SSRRQDW LDDV  P+A S  AA
Sbjct: 2108 SPARVKSPISGCYGAATSSSSGRRHLHHLQRASTVPSPTRTVTLSSAISAETVS--------VCASAGAIS-PTSRARAAGSRRSSSMAVGASGDGGGAVFPEARDCTRDRCQKATADQLNDPVFRGRMKVRTRAANAXXXXXXSTCGNTVSGNGGGSALTGARCQPDRRIHQAGWVDDVGRGQQGKRGRGGVEQRQAAGFNGWMSSRRQDWGLDDVGLPAAQSRGAA 2326
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BLAST of mRNA_P-fluviatile_contig8.14333.1 vs. uniprot
Match: D7FGY7_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY7_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 3.440e-10
Identity = 66/158 (41.77%), Postives = 78/158 (49.37%), Query Frame = 0 
Query:  329 VGGAGCAGSVVTAETMG------RQPTIDQLNDPVFRGRMKARARAASET------AAAAMAAGGAEMGKAVSG-RCPRAARKEPTG---------RGKRSGGSXXXXXXXXXY-GWISSRRQDWALDDVRCPSAPSAAAAAPRGLASSSSRRLSRSK 463
            VGG+G  G  V  E         ++PT DQLNDPVFRGRMKAR RAA         +     A G   G A++G RC    R    G         +GKR GG          + GW+SSRRQDW LDDV  P+A S       G A+ S+ RLSRSK
Sbjct:    3 VGGSGDGGGAVVPEARDCTRDRCQEPTADQLNDPVFRGRMKARTRAAKAXXXXXXXSIGGNPASGNGGGSALTGARCQPDKRIHQVGWVDDVGRGLQGKRGGGGGVEQRQAVGFNGWMSSRRQDWGLDDVGLPAAQSRGV----GSAAPSASRLSRSK 156
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L777_9PHAE1.410e-1036.40BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FGY7_ECTSI3.440e-1041.77BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..947
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:536017..540366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14333.1mRNA_P-fluviatile_contig8.14333.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 535117..542591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14333.1 ID=prot_P-fluviatile_contig8.14333.1|Name=mRNA_P-fluviatile_contig8.14333.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=948bp
MLARRRRERAHASFLAARIRWNEARAKKGAALVAELRQAKMEGAPLGKIL
ARMSVLRNEVFCYNRARDRGSSSGSGSGSGRGGSGSGVCSTGTSSASLPS
AHSGSAGASLSEPANGSRRSPQEGDTPQPGNTSANTVAQMLSLVPAAATA
APSAAPRRRRPAVDIDEVSDQNRAKRRAGTPAATSSAEARPGRAAFSECP
MEAVRTFTVAATATVEVAATAAALGGAGTAPSRGGGAAKARMSSAGLCAS
PARARKPITRFYGTSPSLRPRRASSLPSPPRNVAAAIDAEGAAYAGTTRG
IVPRAAGSIARPSDDASSFSSSCTSARNVGGAGCAGSVVTAETMGRQPTI
DQLNDPVFRGRMKARARAASETAAAAMAAGGAEMGKAVSGRCPRAARKEP
TGRGKRSGGSGGGGGGGNGYGWISSRRQDWALDDVRCPSAPSAAAAAPRG
LASSSSRRLSRSKSAPCNSPTSVGAASAVRPPPPQYVEKAARDAEKAAAS
SHSSTEAYRSLAGRHKAERSTATAADAATVGSAPARGTKRRSARGGGGGG
SGDDGNRGRHGGALDGEPGPRRRGVGPRSHANKNSRGGIEDAGTEGVETL
PPGSSAGMAVVNHAPVAAAAAAAAAAAEALITSPPPLSPKRQRRTVCASV
RFRDVDQVSADESHRQQLATTGGARRQGACTSSSSAARRPCVPTAATSPN
TPQLVGQQQQRRRGPRGKEMVRQASAQAADAAAASASGSATERPPGRGPA
AVTVTATGTVTGTVANFSSGSATFSGLSFVLVGCRPPSPGRSRVDRRQRR
PVVGGPAAPAAGALCVAASRRRGGGGAGGRRTHTRRRRRRRRRRRRRRRR
RRRRTRGGGGDAGEGRGRGGRGGRVGADGVEAAELHSRDRHRDAAAAPLL
GERQRGGRAGPSPRPVPSPRGSGDGEETSGSGRESDGGGRCRSPEGR*
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