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Homology
BLAST of mRNA_P-fluviatile_contig8.14333.1 vs. uniprot
Match: A0A6H5L777_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L777_9PHAE) HSP 1 Score: 351 bits (900), Expect = 7.150e-94 Identity = 274/542 (50.55%), Postives = 330/542 (60.89%), Query Frame = 1
Query: 3025 VSVPTASRLPSYILAIATGTPLLHHFWVSDSAVEGRALPPAPYLLPGARETARRRQALAGNPTAAAAV--AARRAGDAPVVAAAALARVVTRSGTPLTGMALGVAHPCQTACERWARVLCAAGAQTVRQITGALLL---------------------HAGGGVTRATDEASRSSPLQAA-VAGLDCVLCDYPGAWSGAFFSDGGGRQSGVKDTPPRTAGDXXXXXXXXXXXXXSPFPSASASSLPRSSSSLLSALGRVLNTSRHLGVPVVSLFWAADCVLRGSRVRQQARPEYLAPFLNDPSAAAATVPATASSTATAAGSRMRVFMSRAGVRFEVGDHVHYRAQG-GEGXXXXXXXXXXXXXXXXRCAGDSRHPLETAVGRIVHLERAGGGNGGRATATIEPFETADSQTAALTKILRPSGGGXXXGGVIASAYGLPNV---GCGGGFASPSTESSVSRGRARRARELKKVVLAEGSGARSRLLPGAGAARHG---WHRVDAGA--LLGRVSVLPARDFDARRGYCGRDEDVYAQR-RSPT 4548
VSVP+A RLP Y+LAIATGTPLLHH WVSDSA E R LP +PYLLPGARE +RR A +AG + V+ AALA+ V+++GTPL GMA+GVAHP T CERWA+VL AAGAQTV +ITG LL G A +S SS LQA +AGLDCVLCD+PGAW+G+ D ++ P R G P + +A+ +SS S+LG V ++ GVPVV+L WA DCV+RG+RVRQQARPEYL PFL D S AA + + S A +R+ V +SR+G R+EVGDHV++ A G G GXXXXXXXXXXXXXXXX + VGRIVHLERAGG +GGR ATIEP + D++ A ++ L SGG GG A V G GG FASPS +SSVSRGRARRARELKKVVLAE G+ + GAG G W +V+ LLGRVSVL AR+F++RRGYCGRD DVY Q+ R PT
Sbjct: 2675 VSVPSAFRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASPYLLPGAREASRRXXXXXXXXXXXXXXXXATAKAGGSHKVSRAALAKAVSKTGTPLLGMAIGVAHPSPTTCERWAQVLRAAGAQTVLRITGDPLLLLPPQEKTADWTTSSPSRGTRSCSRGRRTAGASSSSSSSLQAGQLAGLDCVLCDFPGAWNGSGGGDDTECRAATGRRPVRGNGGV-------------PAIAGTATKKAKSSPPPFSSLGLVFEAAKLEGVPVVALSWAMDCVVRGTRVRQQARPEYLTPFL-DASVAAGRPSSRSQSLAGGTDTRLLVAVSRSGTRYEVGDHVYFSAAGSGRGXXXXXXXXXXXXXXXXXXX----XXXQAEVGRIVHLERAGG-SGGRVFATIEPLQIPDNKRAVVSS-LGDSGGRAAGGGSGALGRSFLQVVVRGGGGYFASPSADSSVSRGRARRARELKKVVLAEKKGSTA---AGAGTRTPGSQNWQKVEVSDAFLLGRVSVLSAREFNSRRGYCGRDPDVYVQQQRVPT 3193
BLAST of mRNA_P-fluviatile_contig8.14333.1 vs. uniprot
Match: D7FGY7_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY7_ECTSI) HSP 1 Score: 164 bits (416), Expect = 6.850e-38 Identity = 145/319 (45.45%), Postives = 168/319 (52.66%), Query Frame = 1
Query: 2788 IVASGGRLLEDLPPRPRERFAWL---PPAGAEAAALADAARTRGXXXXXXXXXXXXXXXXXEGRAEEGVMQEKGEDAGVVVVVSVPTASRLPSYILAIATGTPLLHHFWVSDSAVEGRALPPAPYLLPGARETARRRQALA------------------GNPTAAAAVAARRAGDAPVVAAAALARVVTRSGTPLTGMALGVAHPCQTACERWARVLCAAGAQTVRQITGALLL-----------------------HAGGGVTRATDEASRSSPLQAA-VAGLDCVLCDYPGAWSGAFFSDGGGRQSGVKDTPPRTAG 3609
IVA GGR+LEDLPP P+ R P AGAE XXXXXXXXXXXXXXXXX VVVVVSVP+ASRLP Y+LAIATGTPLLHH WVSDSA E R LP +PYLLPGARE +R G+ + ALA+ V+++GTPL GMA+GVAHP T CERWA+VL AAGAQTV ++TG LL G A +S SS LQA +AGLDCVLCD+PGAW+G+ D G ++ P R G
Sbjct: 429 IVACGGRVLEDLPP-PKTRGGLALRRPAAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------VVVVVSVPSASRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASPYLLPGAREASRXXXXXXXXXXXXXXXXXXXXXXXXGHKA----------------SHVALAKAVSKTGTPLMGMAIGVAHPSPTTCERWAQVLRAAGAQTVLRVTGDPLLVLLAPREETAVGTRTSSPSRGTWSCSRGRRTAGASSSSSSSLQAEQLAGLDCVLCDFPGAWNGSGGGDDGECRAATGRRPVRGNG 713
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-11_002230.1 |
| Exons | 6 |
| Model size | 5390 |
| Cds size | 2844 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817214.8772433-UTR-P-fluviatile_contig8:535116..535472 | 1622817214.8772433-UTR-P-fluviatile_contig8:535116..535472 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 535117..535472 + |
| 1693571532.8109915-UTR-P-fluviatile_contig8:535116..535472 | 1693571532.8109915-UTR-P-fluviatile_contig8:535116..535472 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 535117..535472 + |
| 1622817214.887726-UTR-P-fluviatile_contig8:535968..536016 | 1622817214.887726-UTR-P-fluviatile_contig8:535968..536016 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 535969..536016 + |
| 1693571532.8186533-UTR-P-fluviatile_contig8:535968..536016 | 1693571532.8186533-UTR-P-fluviatile_contig8:535968..536016 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 535969..536016 + |
| 1622817214.9296327-UTR-P-fluviatile_contig8:540366..541172 | 1622817214.9296327-UTR-P-fluviatile_contig8:540366..541172 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 540367..541172 + |
| 1693571532.8570006-UTR-P-fluviatile_contig8:540366..541172 | 1693571532.8570006-UTR-P-fluviatile_contig8:540366..541172 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 540367..541172 + |
| 1622817214.939685-UTR-P-fluviatile_contig8:541226..542171 | 1622817214.939685-UTR-P-fluviatile_contig8:541226..542171 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 541227..542171 + |
| 1693571532.8654404-UTR-P-fluviatile_contig8:541226..542171 | 1693571532.8654404-UTR-P-fluviatile_contig8:541226..542171 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 541227..542171 + |
| 1622817214.949594-UTR-P-fluviatile_contig8:542200..542591 | 1622817214.949594-UTR-P-fluviatile_contig8:542200..542591 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 542201..542591 + |
| 1693571532.8735673-UTR-P-fluviatile_contig8:542200..542591 | 1693571532.8735673-UTR-P-fluviatile_contig8:542200..542591 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 542201..542591 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817214.8977187-CDS-P-fluviatile_contig8:536016..536085 | 1622817214.8977187-CDS-P-fluviatile_contig8:536016..536085 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 536017..536085 + |
| 1693571532.8265865-CDS-P-fluviatile_contig8:536016..536085 | 1693571532.8265865-CDS-P-fluviatile_contig8:536016..536085 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 536017..536085 + |
| 1622817214.9077783-CDS-P-fluviatile_contig8:536768..539493 | 1622817214.9077783-CDS-P-fluviatile_contig8:536768..539493 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 536769..539493 + |
| 1693571532.8350797-CDS-P-fluviatile_contig8:536768..539493 | 1693571532.8350797-CDS-P-fluviatile_contig8:536768..539493 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 536769..539493 + |
| 1622817214.9178007-CDS-P-fluviatile_contig8:540316..540366 | 1622817214.9178007-CDS-P-fluviatile_contig8:540316..540366 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 540317..540366 + |
| 1693571532.8443637-CDS-P-fluviatile_contig8:540316..540366 | 1693571532.8443637-CDS-P-fluviatile_contig8:540316..540366 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 540317..540366 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14333.1 >prot_P-fluviatile_contig8.14333.1 ID=prot_P-fluviatile_contig8.14333.1|Name=mRNA_P-fluviatile_contig8.14333.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=948bp
MLARRRRERAHASFLAARIRWNEARAKKGAALVAELRQAKMEGAPLGKIL
ARMSVLRNEVFCYNRARDRGSSSGSGSGSGRGGSGSGVCSTGTSSASLPS
AHSGSAGASLSEPANGSRRSPQEGDTPQPGNTSANTVAQMLSLVPAAATA
APSAAPRRRRPAVDIDEVSDQNRAKRRAGTPAATSSAEARPGRAAFSECP
MEAVRTFTVAATATVEVAATAAALGGAGTAPSRGGGAAKARMSSAGLCAS
PARARKPITRFYGTSPSLRPRRASSLPSPPRNVAAAIDAEGAAYAGTTRG
IVPRAAGSIARPSDDASSFSSSCTSARNVGGAGCAGSVVTAETMGRQPTI
DQLNDPVFRGRMKARARAASETAAAAMAAGGAEMGKAVSGRCPRAARKEP
TGRGKRSGGSGGGGGGGNGYGWISSRRQDWALDDVRCPSAPSAAAAAPRG
LASSSSRRLSRSKSAPCNSPTSVGAASAVRPPPPQYVEKAARDAEKAAAS
SHSSTEAYRSLAGRHKAERSTATAADAATVGSAPARGTKRRSARGGGGGG
SGDDGNRGRHGGALDGEPGPRRRGVGPRSHANKNSRGGIEDAGTEGVETL
PPGSSAGMAVVNHAPVAAAAAAAAAAAEALITSPPPLSPKRQRRTVCASV
RFRDVDQVSADESHRQQLATTGGARRQGACTSSSSAARRPCVPTAATSPN
TPQLVGQQQQRRRGPRGKEMVRQASAQAADAAAASASGSATERPPGRGPA
AVTVTATGTVTGTVANFSSGSATFSGLSFVLVGCRPPSPGRSRVDRRQRR
PVVGGPAAPAAGALCVAASRRRGGGGAGGRRTHTRRRRRRRRRRRRRRRR
RRRRTRGGGGDAGEGRGRGGRGGRVGADGVEAAELHSRDRHRDAAAAPLL
GERQRGGRAGPSPRPVPSPRGSGDGEETSGSGRESDGGGRCRSPEGR* back to topmRNA from alignment at P-fluviatile_contig8:535117..542591+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig8.14333.1 ID=mRNA_P-fluviatile_contig8.14333.1|Name=mRNA_P-fluviatile_contig8.14333.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7475bp|location=Sequence derived from alignment at P-fluviatile_contig8:535117..542591+ (Porterinema fluviatile SAG_2381)
AGGACGGCGATGACGACGAGTCTGCCACGCTTACAGACACAGACACGGAC
ACGCTGGCCCCCGTCCCTGCGCCTCCCAACGCTGTCGAAGAATGCAGGCA
AACGCCTTTGGAGCGCCAGCACAAGGGGCACCGGCTAAATGCCGCGACGG
AGCAGCAACAACGACCACCGTCGGGGGGGGCGTTATTGCCCGCTTCGCCC
AGCGACAAACCGGGAGAGAGTAGTGATGACGATTGTCCCAGCGACGGTGC
GCACGCCGAGCCCCCTGCGGCCCCAAGTTCTCGGCGACGACATGCCGACC
GTGCGCTACGGCCGCCGGCGTGTTCGGAGCCGGCTGCCCCGCCAGCCCTC
GCGCAGGTGGGTATGACGAAGCAAATGCCGCCCGCTGGTGGGCTTTGGCT
GCAGCGTCAGAAGCTTCTAGTCGGGGTATTGTCGGCCGTCCGCCGCTGCT
TTGGTTCGCATGATCGCTTGCCCCCTGCGCTAACTCGAGTTTTTGAATGT
CTTCCCAGGTACGCCAGGTGTAAAGCGCCTAACCTCGAGGTGGTACAGCG
GAAACAGGTGCACGAGCTCGATGTGCCGCCGGCACGCTGGATACCGTCGT
GTGGCGAGTCGCCAGTGGGGAGAGAGTGTATTTCCAGGGGCGAGCTGTGG
CGGTTTCGTTGTCGATATCGCGGACAAACCAACCACAAGGTTGTTTAGGA
ACCTGATAATTGCGGGCATCCCATGCACGTAATATACAGCCGCAACTTGA
GTTCCCCCCTTCATCCTGCGCGCGAATATGACCTGAGAGGTTGGCGTCCC
CGCGCCCTTTGCTCTACCCCCCGCGCTCCCTCCTACCCCCGAATCGTAGC
AGTTTGCTACTCCCCTGTTTTTCTTCTGGCATCAGGCGAAGGTCCAGCTG
ATGCTGGCTCGGCGGAGACGAGAGCGGGCACACGCGTCCTTCCTGGCGGC
GCGGATTCGCTGGAACGAGGTGTGTGTGTGTTTCCGACCCAAAGTCGGAA
CTCGAATCTCGTCCATCGATATCGGCGACTCAGGGGAGAATCTCGTTCCC
TTTAACCGCGGCAGAAGGCGCCGTTTGTCGCTTGCCATTTTTTTTTTTTT
TTTTTTCCATTGGTGCCCTTCTGAAACCCGTGCGCATTGAACATATCGTC
TTTGCCGTATGAGTCAATTCCAGGGCGCGGTTGCGCCTTGCAAGAACGTC
AAGCTCGGTGCTGCCAGGTAGGCGCGCGCACACAGCGACCTGCCACCCTC
GTGAGACCGGAAAGGTCGGGTTATTCTTCTTCGCCGCTTCCCTTTGCTGT
CCACGTCGAGCGGGGGTACTCAGCTCGGCAGACTCTGGCAGTGCAGGGGC
AAGCATTTGTTCTAGATGCATTCGTTTATTTTTTTTTTAACCAGCGCTCG
GCGAGTGGGAAGCTCGACCGCAGCGAAGGCTAAGATTCAAGGAGCTCATG
AGGCAGCAGCAGCGTCAAGCGCACGCCAATTTTCGTGCGAGCACCCGGGG
ACGCTGGTCGGACGATCGGTCTCCAGGAAGGCCCTCATGACAGGGCGTCA
ACCCAACCAACTTTGTGTTCCCCCCCGAGGCCCTGCCGCTGACATCAACC
TGTTTCCGATTTTTACGCCGCCCCTTCCCACCCCCCGTCGCCCCCACACC
AGGCGAGGGCTAAGAAAGGCGCCGCGCTCGTCGCCGAGCTGAGGCAGGCC
AAGATGGAGGGAGCTCCGCTCGGGAAAATCCTCGCGAGGATGTCAGTGTT
ACGCAACGAGGTTTTCTGTTACAACCGGGCTCGTGACAGGGGTAGCAGTA
GCGGTAGCGGTAGCGGTAGCGGCCGCGGCGGTAGCGGCAGCGGTGTCTGT
AGCACCGGGACCTCCTCAGCTTCCCTCCCTTCCGCACACAGCGGCAGCGC
TGGCGCCTCTCTATCCGAGCCTGCGAACGGCTCCCGCCGCAGTCCTCAGG
AAGGAGACACTCCACAGCCTGGGAACACTTCTGCTAATACCGTGGCGCAA
ATGCTGTCCCTGGTTCCGGCGGCGGCGACGGCTGCGCCGTCGGCAGCGCC
GAGGCGACGACGGCCTGCAGTTGACATCGACGAGGTCTCCGATCAAAACC
GGGCAAAACGCCGTGCTGGGACCCCGGCGGCGACTTCTTCGGCCGAAGCC
CGACCCGGGAGAGCCGCGTTCAGCGAATGTCCAATGGAAGCAGTCCGGAC
ATTCACTGTAGCAGCAACAGCAACAGTGGAAGTAGCAGCAACAGCAGCAG
CACTAGGAGGAGCTGGAACAGCACCTAGTCGGGGAGGAGGAGCAGCCAAG
GCCAGAATGTCATCGGCAGGCTTGTGCGCGTCACCGGCGCGCGCGAGGAA
GCCGATCACTCGCTTCTACGGGACGTCGCCCAGTCTTCGCCCTCGACGCG
CTTCGAGTCTTCCGTCTCCCCCGCGCAACGTCGCCGCGGCAATCGACGCT
GAGGGCGCCGCCTATGCCGGCACCACAAGAGGGATAGTCCCTCGTGCCGC
TGGTTCGATTGCTCGACCTTCTGATGATGCCTCCTCCTTCTCCTCTTCTT
GCACTTCGGCGAGAAACGTTGGCGGCGCAGGCTGCGCCGGCAGTGTGGTG
ACGGCGGAAACCATGGGCCGTCAGCCGACCATTGATCAGCTCAATGACCC
GGTGTTCCGCGGCAGGATGAAGGCGAGAGCGAGAGCCGCGAGTGAGACGG
CAGCGGCGGCGATGGCGGCGGGCGGCGCGGAGATGGGAAAGGCCGTTTCA
GGGCGATGCCCCCGGGCCGCGCGGAAGGAGCCGACCGGCCGAGGTAAGCG
CAGCGGTGGCAGCGGTGGCGGCGGCGGCGGCGGCAATGGTTATGGCTGGA
TCTCGTCGCGCCGACAGGACTGGGCCCTCGACGATGTGCGCTGCCCCTCC
GCCCCCTCCGCCGCCGCAGCGGCGCCTCGGGGCCTCGCGTCGTCGTCTTC
CCGGCGCCTCTCGCGTTCCAAGTCTGCGCCGTGCAATTCTCCGACCTCCG
TAGGAGCGGCGTCAGCAGTGCGGCCGCCGCCACCACAATACGTCGAGAAA
GCGGCACGCGACGCTGAAAAGGCGGCGGCTTCCTCCCACTCATCGACGGA
GGCATACCGCTCGCTCGCCGGCAGGCACAAAGCGGAGAGGTCGACCGCAA
CGGCGGCGGATGCGGCAACCGTAGGCTCCGCTCCCGCCAGGGGCACCAAG
CGTCGATCTGCTCGTGGAGGTGGCGGCGGCGGCAGCGGCGACGACGGCAA
CCGTGGACGCCACGGCGGTGCGCTCGACGGGGAGCCCGGCCCGCGAAGGC
GGGGCGTCGGCCCGCGCTCGCATGCGAACAAGAACAGTCGAGGCGGCATC
GAGGACGCCGGCACGGAAGGTGTCGAGACCCTCCCGCCGGGGTCCAGCGC
GGGGATGGCAGTAGTGAATCACGCGCCGGTTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCAGCCGAGGCATTGATAACGTCGCCGCCGCCGCTATCTCCG
AAGCGGCAGCGGCGAACGGTATGCGCATCGGTTCGTTTTCGCGACGTGGA
TCAGGTTTCGGCAGATGAATCCCACAGGCAGCAGCTGGCGACGACGGGTG
GTGCACGGCGTCAAGGCGCCTGCACTTCGTCATCGTCGGCGGCAAGACGA
CCATGCGTCCCGACTGCGGCGACATCACCCAACACCCCTCAGCTCGTTGG
TCAGCAGCAGCAACGCCGGCGTGGGCCCCGTGGCAAGGAGATGGTGCGGC
AGGCGAGCGCCCAGGCGGCGGATGCTGCAGCGGCTTCGGCCTCCGGCTCT
GCCACGGAGCGTCCTCCTGGTCGGGGCCCCGCCGCCGTTACCGTTACCGC
TACCGGTACCGTTACCGGTACCGTTGCTAATTTTTCGAGTGGAAGCGCGA
CCTTTTCCGGCCTAAGCTTCGTGCTTGTTGGCTGCCGGCCCCCATCGCCC
GGGAGGTCGAGGGTTGATCGTCGCCAGCGGCGGCCGGTTGTTGGAGGACC
TGCCGCCCCGGCCGCGGGAGCGCTTTGCGTGGCTGCCTCCCGCCGGCGCG
GAGGCGGCGGCGCTGGCGGACGCCGCACGCACACGCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACGGAGGCGAAGGACGCG
CGGAGGAGGGGGTGATGCAGGAGAAGGGCGAGGACGCGGGGGTCGTGGTG
GTCGTGTCGGTGCCGACGGCGTCGAGGCTGCCGAGTTACATTCTCGCGAT
CGCCACCGGGACGCCGCTGCTGCACCACTTCTGGGTGAGCGACAGCGCGG
TGGAAGGGCGGGCCCTTCCCCCCGCCCCGTACCTTCTCCCCGGGGCTCGG
GAGACGGCGAGGAGACGTCAGGCTCTGGTCGGCGGCGCAGCCGGGGCCGG
TGAGTGCACTGCCCTTAATTGTGTCCCCAGCGTTATCCAGAGGAAAAAGT
CAAGCCGCGTACCACCAATGTTCATGTTGTCGAAGCATTTCAAGGTTTCA
AAATCGGGGACGGATGTCCCTGGCCAGCATCGGACTCTCTGTCGTAAATG
TTGCTCAGAAGTTCAAGATCGGTTCTCAACGCTTGCAGCTTTGGCTTTGT
TTTGTAGAAATGGCGACCATCTAGGTGAGCACATGTGGTGTATTTCCAGG
CCTGCGCTTGTTGTGTGTGGTATGTCGACGGGCATGGCCGAGTGTTTGAT
TGTGAAAGGTGCGATCAGTTGAATGCAGGTGTGAGTGATCATCGCTGAAT
TGTTTTCGACAAAAAATCCCGCAGAGAGGCGCGCAAAGGCCAGCCACGTT
CGGCAAATTCTCGCGAGGCACACTCACGAGGTATCCTGGGCTCGTACTGC
TCGGATGCATAACCTTGCAGCGATGATCATATGAAGCGTCCCATTTGTGG
GACAAACGGCTCAAGAACAAAAAACGATCGACAGACATACATGATATCGA
AAACTGCGGCCATGGTGGGAACGTGCCTTAAACGCGAGCTACCGGTTTTG
GGTCATGTATCGGTGACTTTTACCGTGCAAGCAATCTATTTTCGGTCTTC
GGCGTCGTAGGATCAATTGTTGAGCATCACTGTTGTGCCATTTATGGGCT
GTTAAATGTGGAGTGCGTCATTTTATGTTCGTTTGTTCTTTGTTGGTTCG
TCGACCCACCGCATCCCTGATCGCGGCGCGCAGGCGGCGGTTCGATTCAG
GCAGGGAATCCGACGGCGGCGGCCGCTGTCGCAGCCCGGAGGGCCGGTGA
CGCCCCGGTTGTGGCGGCGGCGGCCCTGGCGAGAGTTGTCACTCGGTCTG
GGACGCCGCTGACAGGGATGGCGCTCGGCGTGGCGCACCCGTGCCAGACT
GCGTGCGAGCGCTGGGCGAGGGTGCTCTGTGCGGCGGGGGCTCAGACCGT
GCGGCAGATCACGGGCGCCCTTCTTCTTCACGCTGGTGGCGGCGTTACGA
GGGCAACGGATGAGGCATCGCGCTCGTCGCCGCTCCAAGCGGCTGTAGCA
GGCCTCGACTGCGTGCTGTGCGACTATCCCGGCGCGTGGAGCGGCGCCTT
CTTCAGCGACGGCGGCGGCCGACAGTCGGGGGTTAAGGACACTCCTCCTC
GGACGGCGGGCGACGGCGGCGGCGGAGGCGGCGGCGGCAGCACGGCAGCG
GCCTCTCCGTTTCCTTCTGCTTCTGCTTCTTCCTTACCGCGGTCGTCCTC
TTCGCTGCTCTCTGCGCTCGGGCGCGTCTTGAACACGAGTCGGCACCTAG
GGGTCCCCGTGGTGTCGCTGTTTTGGGCTGCCGACTGCGTGCTCCGCGGG
AGCCGGGTCAGGCAGCAGGCGCGGCCTGAGTACCTCGCGCCTTTCCTGAA
CGACCCTAGCGCGGCAGCAGCCACGGTGCCGGCAACAGCATCGTCGACGG
CGACAGCGGCGGGGTCTCGGATGCGTGTGTTCATGTCGAGGGCCGGTGTG
CGTTTCGAGGTGGGCGACCACGTCCACTACCGCGCTCAAGGGGGGGAGGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGATGAGGAAGGCGGGGGGC
GCTGCGGTGCCGGTACCGCCTCCGTCGGAGGCGACGGTGGCGGGAGCAGG
CTCGCTCAAGCCGGGGACAGCCGGCACCCTCTGGAGACGGCCGTTGGGCG
CATCGTCCACCTGGAACGAGCGGGTGGCGGCAACGGCGGCCGAGCGACGG
CGACGATCGAGCCGTTCGAGACGGCCGACAGTCAGACGGCAGCGCTGACG
AAGATCCTGCGCCCGTCCGGCGGCGGGAACGGTGGCGGCGGCGTGATCGC
CTCGGCCTACGGGCTGCCAAACGTAGGTTGCGGTGGTGGCTTCGCGAGCC
CCTCGACGGAGAGCTCCGTCTCCAGGGGAAGGGCACGGCGGGCGAGGGAG
CTCAAGAAGGTCGTGCTGGCGGAGGGTTCCGGAGCCCGGTCCCGTCTCCT
TCCCGGTGCCGGCGCCGCTAGGCATGGCTGGCACAGGGTTGACGCCGGCG
CTCTGCTGGGGAGGGTATCTGTGCTCCCTGCGCGGGACTTCGACGCTCGC
CGCGGCTACTGCGGCCGGGATGAAGACGTTTACGCCCAACGGCGATCGCC
GACGTTGTCGTGGGCGAGCCTTCTGTGACTTATCATCAAATGAAGGGTTT
TGGCTGGCGGTAGCTGCACACGTATGCAGCAATTTGGTCAGTGCGTACTT
GTTTCGGGTAAGACGGGGAGGTATTTACCAGATCGTTTCGTCTCGTGGTG
TGTTTGTGTATTAGTGTTCGGTGTTCGAAACCCGCCCGTTTCAAAATAAT
ATTGGCTGTGTTCGTGGCTGTATTCGTGGCTGTGTTTGTGGTGTGAGCTG
TAACCGTGCTGTTGTGCGTGTGAACACGCGTGTTGTGTGTGCGATAAACG
TGTCTGAGCGAAAGGCGAAATGCAAATAGAGCGAGTCCGGCGAACGAGTT
CAAAACGGATCAATGAGTCGATCCCGTGAGTGGCTCTCAAGGATGAAAGC
TTGAGCTTGCTGTTTGCACGACGGATATGACCCCGTGGCATTGAGCTACG
ATCCTGCGCGTCACATGGCGCCCGGTAATTGCAGTCTCTGTACAAAGGTG
TCTTCAATTCGCTTTTGCACTTCTTCCCCCCTCCCGCGACTGAGTCTTCG
ATTGGGTTCGGGGAGAAAGGGGTTGCCACAGGGTGCGCGAGTTCAGGCGT
TTGCAGATTTGGATAGGATAATTCCGCACTTCTCTTGGCAGATCTGGAGA
ATAGCGAACATCCTCCGCGAGATATGATTTGGGTTAATCAACTTCATGGA
AGCGTGTTTTTGAACGTATCCGAGGGCAACGAAGAGTCGACCAATGAATA
TTTCAAGGCAGCGAAACACGTAGGGAAGAAAATGGAGGAGGATGAAATCA
AAGGGGACGAATTTCGAGGGAATGGAATCGCAGTCATGAAATTGAAGGCA
AGGAGACTGTTGCTGATGAGAAGAC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig8:535117..542591+ >mRNA_P-fluviatile_contig8.14333.1 ID=mRNA_P-fluviatile_contig8.14333.1|Name=mRNA_P-fluviatile_contig8.14333.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5688bp|location=Sequence derived from alignment at P-fluviatile_contig8:535117..542591+ (Porterinema fluviatile SAG_2381)
ATGCTGGCTCGGCGGAGACGAGAGCGGGCACACGCGTCCTTCCTGGCGGC
GCGGATTCGCTGGAACGAGATGCTGGCTCGGCGGAGACGAGAGCGGGCAC
ACGCGTCCTTCCTGGCGGCGCGGATTCGCTGGAACGAGGCGAGGGCTAAG
AAAGGCGCCGCGCTCGTCGCCGAGCTGAGGCAGGCCAAGATGGAGGGAGC
TCCGCTCGGGAAAATCCTCGCGAGGATGTCAGTGTTACGCAACGAGGTTT
TCTGTTACAACCGGGCTCGTGACAGGGGTAGCAGTAGCGGTAGCGGTAGC
GGTAGCGGCCGCGGCGGTAGCGGCAGCGGTGTCTGTAGCACCGGGACCTC
CTCAGCTTCCCTCCCTTCCGCACACAGCGGCAGCGCTGGCGCCTCTCTAT
CCGAGCCTGCGAACGGCTCCCGCCGCAGTCCTCAGGAAGGAGACACTCCA
CAGCCTGGGAACACTTCTGCTAATACCGTGGCGCAAATGCTGTCCCTGGT
TCCGGCGGCGGCGACGGCTGCGCCGTCGGCAGCGCCGAGGCGACGACGGC
CTGCAGTTGACATCGACGAGGTCTCCGATCAAAACCGGGCAAAACGCCGT
GCTGGGACCCCGGCGGCGACTTCTTCGGCCGAAGCCCGACCCGGGAGAGC
CGCGTTCAGCGAATGTCCAATGGAAGCAGTCCGGACATTCACTGTAGCAG
CAACAGCAACAGTGGAAGTAGCAGCAACAGCAGCAGCACTAGGAGGAGCT
GGAACAGCACCTAGTCGGGGAGGAGGAGCAGCCAAGGCCAGAATGTCATC
GGCAGGCTTGTGCGCGTCACCGGCGCGCGCGAGGAAGCCGATCACTCGCT
TCTACGGGACGTCGCCCAGTCTTCGCCCTCGACGCGCTTCGAGTCTTCCG
TCTCCCCCGCGCAACGTCGCCGCGGCAATCGACGCTGAGGGCGCCGCCTA
TGCCGGCACCACAAGAGGGATAGTCCCTCGTGCCGCTGGTTCGATTGCTC
GACCTTCTGATGATGCCTCCTCCTTCTCCTCTTCTTGCACTTCGGCGAGA
AACGTTGGCGGCGCAGGCTGCGCCGGCAGTGTGGTGACGGCGGAAACCAT
GGGCCGTCAGCCGACCATTGATCAGCTCAATGACCCGGTGTTCCGCGGCA
GGATGAAGGCGAGAGCGAGAGCCGCGAGTGAGACGGCAGCGGCGGCGATG
GCGGCGGGCGGCGCGGAGATGGGAAAGGCCGTTTCAGGGCGATGCCCCCG
GGCCGCGCGGAAGGAGCCGACCGGCCGAGGTAAGCGCAGCGGTGGCAGCG
GTGGCGGCGGCGGCGGCGGCAATGGTTATGGCTGGATCTCGTCGCGCCGA
CAGGACTGGGCCCTCGACGATGTGCGCTGCCCCTCCGCCCCCTCCGCCGC
CGCAGCGGCGCCTCGGGGCCTCGCGTCGTCGTCTTCCCGGCGCCTCTCGC
GTTCCAAGTCTGCGCCGTGCAATTCTCCGACCTCCGTAGGAGCGGCGTCA
GCAGTGCGGCCGCCGCCACCACAATACGTCGAGAAAGCGGCACGCGACGC
TGAAAAGGCGGCGGCTTCCTCCCACTCATCGACGGAGGCATACCGCTCGC
TCGCCGGCAGGCACAAAGCGGAGAGGTCGACCGCAACGGCGGCGGATGCG
GCAACCGTAGGCTCCGCTCCCGCCAGGGGCACCAAGCGTCGATCTGCTCG
TGGAGGTGGCGGCGGCGGCAGCGGCGACGACGGCAACCGTGGACGCCACG
GCGGTGCGCTCGACGGGGAGCCCGGCCCGCGAAGGCGGGGCGTCGGCCCG
CGCTCGCATGCGAACAAGAACAGTCGAGGCGGCATCGAGGACGCCGGCAC
GGAAGGTGTCGAGACCCTCCCGCCGGGGTCCAGCGCGGGGATGGCAGTAG
TGAATCACGCGCCGGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAGCC
GAGGCATTGATAACGTCGCCGCCGCCGCTATCTCCGAAGCGGCAGCGGCG
AACGGTATGCGCATCGGTTCGTTTTCGCGACGTGGATCAGGTTTCGGCAG
ATGAATCCCACAGGCAGCAGCTGGCGACGACGGGTGGTGCACGGCGTCAA
GGCGCCTGCACTTCGTCATCGTCGGCGGCAAGACGACCATGCGTCCCGAC
TGCGGCGACATCACCCAACACCCCTCAGCTCGTTGGTCAGCAGCAGCAAC
GCCGGCGTGGGCCCCGTGGCAAGGAGATGGTGCGGCAGGCGAGCGCCCAG
GCGGCGGATGCTGCAGCGGCTTCGGCCTCCGGCTCTGCCACGGAGCGTCC
TCCTGGTCGGGGCCCCGCCGCCGTTACCGTTACCGCTACCGGTACCGTTA
CCGGTACCGTTGCTAATTTTTCGAGTGGAAGCGCGACCTTTTCCGGCCTA
AGCTTCGTGCTTGTTGGCTGCCGGCCCCCATCGCCCGGGAGGTCGAGGGT
TGATCGTCGCCAGCGGCGGCCGGTTGTTGGAGGACCTGCCGCCCCGGCCG
CGGGAGCGCTTTGCGTGGCTGCCTCCCGCCGGCGCGGAGGCGGCGGCGCT
GGCGGACGCCGCACGCACACGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCGACGACGGAGGCGAAGGACGCGCGGAGGAGGGGGTG
ATGCAGGAGAAGGGCGAGGACGCGGGGGTCGTGGTGGTCGTGTCGGTGCC
GACGGCGTCGAGGCTGCCGAGTTACATTCTCGCGATCGCCACCGGGACGC
CGCTGCTGCACCACTTCTGGGTGAGCGACAGCGCGGTGGAAGGGCGGGCC
CTTCCCCCCGCCCCGTACCTTCTCCCCGGGGCTCGGGAGACGGCGAGGAG
ACGTCAGGCTCTGGCGAGGGCTAAGAAAGGCGCCGCGCTCGTCGCCGAGC
TGAGGCAGGCCAAGATGGAGGGAGCTCCGCTCGGGAAAATCCTCGCGAGG
ATGTCAGTGTTACGCAACGAGGTTTTCTGTTACAACCGGGCTCGTGACAG
GGGTAGCAGTAGCGGTAGCGGTAGCGGTAGCGGCCGCGGCGGTAGCGGCA
GCGGTGTCTGTAGCACCGGGACCTCCTCAGCTTCCCTCCCTTCCGCACAC
AGCGGCAGCGCTGGCGCCTCTCTATCCGAGCCTGCGAACGGCTCCCGCCG
CAGTCCTCAGGAAGGAGACACTCCACAGCCTGGGAACACTTCTGCTAATA
CCGTGGCGCAAATGCTGTCCCTGGTTCCGGCGGCGGCGACGGCTGCGCCG
TCGGCAGCGCCGAGGCGACGACGGCCTGCAGTTGACATCGACGAGGTCTC
CGATCAAAACCGGGCAAAACGCCGTGCTGGGACCCCGGCGGCGACTTCTT
CGGCCGAAGCCCGACCCGGGAGAGCCGCGTTCAGCGAATGTCCAATGGAA
GCAGTCCGGACATTCACTGTAGCAGCAACAGCAACAGTGGAAGTAGCAGC
AACAGCAGCAGCACTAGGAGGAGCTGGAACAGCACCTAGTCGGGGAGGAG
GAGCAGCCAAGGCCAGAATGTCATCGGCAGGCTTGTGCGCGTCACCGGCG
CGCGCGAGGAAGCCGATCACTCGCTTCTACGGGACGTCGCCCAGTCTTCG
CCCTCGACGCGCTTCGAGTCTTCCGTCTCCCCCGCGCAACGTCGCCGCGG
CAATCGACGCTGAGGGCGCCGCCTATGCCGGCACCACAAGAGGGATAGTC
CCTCGTGCCGCTGGTTCGATTGCTCGACCTTCTGATGATGCCTCCTCCTT
CTCCTCTTCTTGCACTTCGGCGAGAAACGTTGGCGGCGCAGGCTGCGCCG
GCAGTGTGGTGACGGCGGAAACCATGGGCCGTCAGCCGACCATTGATCAG
CTCAATGACCCGGTGTTCCGCGGCAGGATGAAGGCGAGAGCGAGAGCCGC
GAGTGAGACGGCAGCGGCGGCGATGGCGGCGGGCGGCGCGGAGATGGGAA
AGGCCGTTTCAGGGCGATGCCCCCGGGCCGCGCGGAAGGAGCCGACCGGC
CGAGGTAAGCGCAGCGGTGGCAGCGGTGGCGGCGGCGGCGGCGGCAATGG
TTATGGCTGGATCTCGTCGCGCCGACAGGACTGGGCCCTCGACGATGTGC
GCTGCCCCTCCGCCCCCTCCGCCGCCGCAGCGGCGCCTCGGGGCCTCGCG
TCGTCGTCTTCCCGGCGCCTCTCGCGTTCCAAGTCTGCGCCGTGCAATTC
TCCGACCTCCGTAGGAGCGGCGTCAGCAGTGCGGCCGCCGCCACCACAAT
ACGTCGAGAAAGCGGCACGCGACGCTGAAAAGGCGGCGGCTTCCTCCCAC
TCATCGACGGAGGCATACCGCTCGCTCGCCGGCAGGCACAAAGCGGAGAG
GTCGACCGCAACGGCGGCGGATGCGGCAACCGTAGGCTCCGCTCCCGCCA
GGGGCACCAAGCGTCGATCTGCTCGTGGAGGTGGCGGCGGCGGCAGCGGC
GACGACGGCAACCGTGGACGCCACGGCGGTGCGCTCGACGGGGAGCCCGG
CCCGCGAAGGCGGGGCGTCGGCCCGCGCTCGCATGCGAACAAGAACAGTC
GAGGCGGCATCGAGGACGCCGGCACGGAAGGTGTCGAGACCCTCCCGCCG
GGGTCCAGCGCGGGGATGGCAGTAGTGAATCACGCGCCGGTTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCAGCCGAGGCATTGATAACGTCGCCGCCGC
CGCTATCTCCGAAGCGGCAGCGGCGAACGGTATGCGCATCGGTTCGTTTT
CGCGACGTGGATCAGGTTTCGGCAGATGAATCCCACAGGCAGCAGCTGGC
GACGACGGGTGGTGCACGGCGTCAAGGCGCCTGCACTTCGTCATCGTCGG
CGGCAAGACGACCATGCGTCCCGACTGCGGCGACATCACCCAACACCCCT
CAGCTCGTTGGTCAGCAGCAGCAACGCCGGCGTGGGCCCCGTGGCAAGGA
GATGGTGCGGCAGGCGAGCGCCCAGGCGGCGGATGCTGCAGCGGCTTCGG
CCTCCGGCTCTGCCACGGAGCGTCCTCCTGGTCGGGGCCCCGCCGCCGTT
ACCGTTACCGCTACCGGTACCGTTACCGGTACCGTTGCTAATTTTTCGAG
TGGAAGCGCGACCTTTTCCGGCCTAAGCTTCGTGCTTGTTGGCTGCCGGC
CCCCATCGCCCGGGAGGTCGAGGGTTGATCGTCGCCAGCGGCGGCCGGTT
GTTGGAGGACCTGCCGCCCCGGCCGCGGGAGCGCTTTGCGTGGCTGCCTC
CCGCCGGCGCGGAGGCGGCGGCGCTGGCGGACGCCGCACGCACACGCGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACGGAGG
CGAAGGACGCGCGGAGGAGGGGGTGATGCAGGAGAAGGGCGAGGACGCGG
GGGTCGTGGTGGTCGTGTCGGTGCCGACGGCGTCGAGGCTGCCGAGTTAC
ATTCTCGCGATCGCCACCGGGACGCCGCTGCTGCACCACTTCTGGGTGAG
CGACAGCGCGGTGGAAGGGCGGGCCCTTCCCCCCGCCCCGTACCTTCTCC
CCGGGGCTCGGGAGACGGCGAGGAGACGTCAGGCTCTGGCAGGGAATCCG
ACGGCGGCGGCCGCTGTCGCAGCCCGGAGGGCCGGTGAGCAGGGAATCCG
ACGGCGGCGGCCGCTGTCGCAGCCCGGAGGGCCGGTGA back to top
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