prot_P-fluviatile_contig8.14324.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14324.1
Unique Nameprot_P-fluviatile_contig8.14324.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length111
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14324.1 vs. uniprot
Match: A0A6H5K4Q5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q5_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.000e-9
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:   29 SRATHGNDIDLSVQHPGEMMFVPVFWMRAVLNLDDATAIVQKFVRTYN 76
            +RA + +++ L VQHPGE MFVP FWM AVLNLDD TA+ Q  V ++N
Sbjct:  227 ARARYADEVTLYVQHPGETMFVPGFWMHAVLNLDDTTAVTQNIVTSHN 274
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4Q5_9PHAE1.000e-958.33JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.650coord: 32..87
e-value: 3.5E-6
score: 28.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..110
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:469234..469566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14324.1mRNA_P-fluviatile_contig8.14324.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 465460..469872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14324.1 ID=prot_P-fluviatile_contig8.14324.1|Name=mRNA_P-fluviatile_contig8.14324.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=111bp
MPMQSDRLQQLMIIGCACAGSRAGAGGSSRATHGNDIDLSVQHPGEMMFV
PVFWMRAVLNLDDATAIVQKFVRTYNLAEVRKSISAMFHGLHRITPNKLG
EGEAVLSTVV*
back to top