prot_P-fluviatile_contig79.14271.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig79.14271.1
Unique Nameprot_P-fluviatile_contig79.14271.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length305
Homology
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: D8LD33_ECTSI (50S ribosomal protein L4P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD33_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 1.530e-126
Identity = 219/302 (72.52%), Postives = 248/302 (82.12%), Query Frame = 0
Query:    5 LVRFRSSAVNSSKWEQEVLPVAPVLSGSQKMPANLKLAVEARPE----EXXXXXXXXXXXXXXXXXXXXEPLSEEDREAIDSILDTPNTAAAS-LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            LVR  SS + SS+WE+E LPVAPV SGS+ +P+NLKLAVEA P     E        XXXXXXXXXXXX PLSEED +AI ++LD P  AA   L+VEVV+WA+G P  ++SLAPSVFGVP RRDVVHEVVRWQLARRR+GNGQTKRIGEISGSGRKVR QKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFV+L L+VALSARLREG+L VVD L+S  F TS MIKT+KARG+DG  VTF++ GDPQ EF RS +NI+G KVL  +GANV+DIIKRPNLVL+Q AV HLE+ L
Sbjct:    5 LVRSMSS-LKSSQWEREGLPVAPVQSGSEPLPSNLKLAVEAWPAATAGEGGDAEEDAXXXXXXXXXXXXXPLSEEDHDAIAALLDIPGLAATDDLEVEVVAWADGAPVATVSLAPSVFGVPVRRDVVHEVVRWQLARRRKGNGQTKRIGEISGSGRKVRPQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVRLGLRVALSARLREGQLKVVDDLKSDGFKTSAMIKTIKARGIDG-PVTFVVGGDPQVEFMRSVSNIMGAKVLPARGANVHDIIKRPNLVLTQDAVTHLEEFL 304          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A6H5KTL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL0_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.250e-124
Identity = 214/306 (69.93%), Postives = 247/306 (80.72%), Query Frame = 0
Query:   11 SAVNSSKWEQEVLPVAPVLSGSQKMPANLKLAVEARPEEXXXXXXXXXXXXXXXXXXXX-----------EPLSEEDREAIDSILDTPNTAAAS-LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLTPS 304
            S++ SS+WE+E LPVAPV SGS+ +P+NLKLA EA P            XXXXXXXXXX           +PLSEED +AI ++LDTP  AA+  L+VEVV+W++G P  ++SLAPSVFGVP RRDVVHEVVRWQLARRR+GNGQTKRIGEISGSGRKVR QKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFV+L L+VALSARLREG+L VVD L+S  F TS MIKT+KARG+DG  VTF++ GDPQ EF RS +NIVGVKVL+ +GANV+DIIKRPNLVL+Q AV HLE+ L  S
Sbjct:   81 SSLKSSQWEREGLPVAPVHSGSEPLPSNLKLAAEAWPAATAGEGGNAEGXXXXXXXXXXXXXXXXXXXXTDPLSEEDHDAIAALLDTPGLAASDDLEVEVVAWSDGAPVATVSLAPSVFGVPVRRDVVHEVVRWQLARRRKGNGQTKRIGEISGSGRKVRPQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVRLGLRVALSARLREGQLKVVDDLKSDGFRTSAMIKTIKARGIDG-PVTFMVGGDPQVEFMRSVSNIVGVKVLSARGANVHDIIKRPNLVLTQDAVTHLEEFLQTS 385          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A835ZAZ5_9STRA (Ribosomal protein L4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.710e-45
Identity = 100/215 (46.51%), Postives = 137/215 (63.72%), Query Frame = 0
Query:   90 AAASLDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPR-RRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESK-TFSTSEMIKTMKARGLDGGDVTFIMEGD-PQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            A  S  V V+    G    +++L P +FG   RRDVVH VVRWQLA RR+G  +TK I E+SGSG+K+R QKG G AR GH RPPHWRGGAKAHGP+  RD+S+KL+KK  K+ L+VALSA+LRE +L VVD L +    +T    + ++A GL       +++G  P+     +T ++ GVK+L    AN YDI++   LV+S+  +  L + L
Sbjct:  128 AEPSFTVPVIDLVTGEEVDTVALDPFIFGHEIRRDVVHAVVRWQLACRRQGAAKTKLISEVSGSGKKMRPQKGSGQARCGHKRPPHWRGGAKAHGPKGNRDWSYKLHKKVRKMGLRVALSAKLRERKLVVVDALTTDGAAATGPTAERLRALGLLRS--ALLVDGAAPEDALAHATRHLPGVKLLWGGAANCYDILRSDRLVVSRAGLQFLTEKL 340          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A7S2DV07_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DV07_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.400e-44
Identity = 98/197 (49.75%), Postives = 131/197 (66.50%), Query Frame = 0
Query:  110 LSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRD-FSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFI---MEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLT 302
            LSL   VFG P R D++H+VVRWQLA+RRRG   TK I E+SGSG+K+R QKG G ARAGHSRPPHWR GA AHGPR    ++FKLNKK  +L L  ALS +L EGRL VVD L +++  T  + + +  +G     + F+   + GD    F+++++N+  V  L   G NVYDI+K  ++VL+  AVA LE+ L+
Sbjct:  140 LSLDSRVFGRPLRIDILHQVVRWQLAKRRRGTAHTKNISEVSGSGKKMRPQKGTGQARAGHSRPPHWRHGAVAHGPRGETIWTFKLNKKVRRLGLLTALSQKLSEGRLHVVDSLATESLKTRALEQRLVHQGWTD-KILFVDDLLTGDSF--FRKASSNLPYVHTLPSIGLNVYDILKATDVVLTVDAVAALEERLS 333          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A1V9ZG37_9STRA (50S ribosomal protein L4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZG37_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.860e-44
Identity = 92/212 (43.40%), Postives = 132/212 (62.26%), Query Frame = 0
Query:   90 AAASLDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            AA ++  +++S+ +G   G+LSL  SVFG P R+D++  VV+WQLA RR GN +TK   E+SGS RK  AQKG G AR G+ RPP WRGG +AHGP  RD S+ L KK   + L+VALSA+L EG+L +V  L  ++  T    + ++++G D  D  F+   +    F  +T N+  V V+  +  NVY I+ +  LVLS+  V +LE+ L
Sbjct:   51 AAGNVQAKLLSFKDGAQIGTLSLNRSVFGAPIRKDILQRVVKWQLANRRSGNHKTKTRSEVSGSTRKAWAQKGSGRARVGNIRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSAKLAEGKLAIVQDLSIESEKTKAAKQLLESKGWD--DALFVDGAEAPKNFVLATRNLARVDVIREQQVNVYSILHKDVLVLSEKTVKYLEERL 260          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A6G0XNJ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNJ9_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.040e-43
Identity = 91/208 (43.75%), Postives = 128/208 (61.54%), Query Frame = 0
Query:   94 LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            +  +++++A+G   GSL+L+ SVFG P R+D++H VV+WQLA RR GN +TK   E+SGS +KV  QKG G AR G+ RPP WRGG +AHGP  RD S+ L KK   + L+VALS +L EG+L +V  L  +   T  M   ++ +G D     FI   +    F  ST N+  V V+  K  NVY I+ +  LV+S+  V +LE+ L
Sbjct:   63 IQAKILTFADGAAVGSLTLSRSVFGTPVRKDLLHRVVKWQLANRRSGNHKTKTRSEVSGSTKKVWKQKGSGRARVGNRRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSTKLAEGKLAIVKDLHVEEDKTKPMKSLLETKGWD--HALFIDGDETSRNFVLSTRNLPNVDVIRQKNINVYAILHKDVLVVSEKTVKYLEERL 268          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: RL4_RHORT (50S ribosomal protein L4 n=1 Tax=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) TaxID=269796 RepID=RL4_RHORT)

HSP 1 Score: 156 bits (395), Expect = 2.540e-43
Identity = 93/203 (45.81%), Postives = 129/203 (63.55%), Query Frame = 0
Query:   99 VSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            V   +G  +GS+ L+ SVFG+P R D++H +VRWQLARR+ G  +TK I EISG+  K   QKG G AR G  R P +RGGA   GP  R  +  LNKK  KL LK ALSA+ + G+L V+D+  S++  T +++  +K  GL+   V FI   +   +F  +  NI+G+ VL  +GANVYDI++R  LVL++ AV HLE+ L
Sbjct:    5 VKTLDGKDAGSIELSDSVFGLPVRTDLLHRMVRWQLARRQAGTHKTKGISEISGTTAKPFKQKGTGHARQGSKRSPQFRGGATIFGPVVRSHAHDLNKKVRKLGLKTALSAKAQAGQLIVLDQAISESGKTKDLLAQLKVLGLE--KVLFIDGPEVNEKFALAARNIIGLDVLPQQGANVYDILRRDTLVLTKEAVKHLEERL 205          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A522CD43_9PROT (50S ribosomal protein L4 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A522CD43_9PROT)

HSP 1 Score: 156 bits (394), Expect = 3.470e-43
Identity = 93/194 (47.94%), Postives = 122/194 (62.89%), Query Frame = 0
Query:  108 GSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            G + L+ ++FG+  R+DV+H +V WQLA+RR GN +TK+IGEISG+G+K  AQKG G AR G  R P +R GA   GP  RD S  L K   KLALK ALS++  EG+L V+D  ++K   T EM K + A GL       I++  P   F R+  NI  + VL  KG NVYDI++R  LVL++ AVA LE  L
Sbjct:   14 GDIDLSDAIFGLTPRKDVLHRMVNWQLAKRRSGNHKTKQIGEISGTGKKPYAQKGTGNARQGSLRSPQFRKGAVIFGPIVRDHSHDLPKAVRKLALKTALSSKQAEGKLIVLDAAKAKDHKTKEMAKALVALGLTSA---LIIDETPDVNFTRAVRNIKNIDVLPQKGINVYDILRRDILVLTKDAVAQLEARL 204          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A1V9ZKR4_9STRA (50S ribosomal protein L4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZKR4_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.670e-42
Identity = 89/212 (41.98%), Postives = 130/212 (61.32%), Query Frame = 0
Query:   90 AAASLDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            A  ++  +V+S+ +G+   +LSL  SVFG P R+D++H VV+WQLA RR GN +TK   E+SGS RK  AQKG G AR G+ RPP WRGG +AHGP  RD S+ L KK   + L+VALS ++ EG+L +V  LE ++  T    + ++++G D  D  F+   +    F  +T N+  V V+     NVY I+ +  LV+S+    +LE+ L
Sbjct:   52 ANGNVQAKVLSFVDGSEVSTLSLNRSVFGAPLRKDILHRVVKWQLANRRSGNHKTKTRSEVSGSTRKAWAQKGSGRARVGNIRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSTKMAEGKLAIVKDLEIESEKTKAAKQLLESKGWD--DALFVDGSEAPKNFVLATRNLPRVDVIRDHQVNVYSILHKDILVISEKTAKYLEERL 261          
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A485KYQ5_9STRA (Aste57867_13666 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYQ5_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.370e-41
Identity = 90/208 (43.27%), Postives = 128/208 (61.54%), Query Frame = 0
Query:   94 LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 301
            +  +V+S+ +G   GSL+L+ SVFG P R+D++  VV+WQLA RR GN +TK   E+SGS +K   QKG G AR G+ RPP WRGG +AHGP  RD S+ L KK   + L+VALSA+L EG+L +V  L+ ++  T  M + +  +G D     FI   +    F  ST N+  V V+  +  +VY I+ +  LVLS+  V +LE+ L
Sbjct:   67 IQAKVLSFNDGASVGSLTLSRSVFGAPIRKDILQRVVKWQLANRRSGNHKTKTRSEVSGSTKKAWKQKGSGRARVGNIRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSAKLAEGKLAIVQDLDVESEKTKAMKELLATKGWD--HALFIDGEEASRNFVLSTRNLPHVDVIRQRNISVYSILHKDVLVLSEKTVKYLEERL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD33_ECTSI1.530e-12672.5250S ribosomal protein L4P n=1 Tax=Ectocarpus silic... [more]
A0A6H5KTL0_9PHAE1.250e-12469.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAZ5_9STRA2.710e-4546.51Ribosomal protein L4 domain-containing protein n=1... [more]
A0A7S2DV07_9STRA3.400e-4449.75Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A1V9ZG37_9STRA5.860e-4443.4050S ribosomal protein L4 n=3 Tax=Saprolegniaceae T... [more]
A0A6G0XNJ9_9STRA2.040e-4343.75Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
RL4_RHORT2.540e-4345.8150S ribosomal protein L4 n=1 Tax=Rhodospirillum ru... [more]
A0A522CD43_9PROT3.470e-4347.9450S ribosomal protein L4 n=1 Tax=Alphaproteobacter... [more]
A0A1V9ZKR4_9STRA3.670e-4241.9850S ribosomal protein L4 n=1 Tax=Thraustotheca cla... [more]
A0A485KYQ5_9STRA1.370e-4143.27Aste57867_13666 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023574Ribosomal protein L4 domain superfamilyGENE3D3.40.1370.10coord: 85..304
e-value: 4.2E-66
score: 224.4
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 102..301
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 111..299
e-value: 6.4E-57
score: 192.4
IPR01300550S ribosomal protein uL4TIGRFAMTIGR03953TIGR03953coord: 111..298
e-value: 4.1E-57
score: 190.5
IPR01300550S ribosomal protein uL4PANTHERPTHR1074650S RIBOSOMAL PROTEIN L4coord: 86..302
IPR01300550S ribosomal protein uL4HAMAPMF_01328_BRibosomal_L4_Bcoord: 102..302
score: 27.393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig79contigP-fluviatile_contig79:340158..346433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig79.14271.1mRNA_P-fluviatile_contig79.14271.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig79 339201..346582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig79.14271.1 ID=prot_P-fluviatile_contig79.14271.1|Name=mRNA_P-fluviatile_contig79.14271.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=305bp
MVPSLVRFRSSAVNSSKWEQEVLPVAPVLSGSQKMPANLKLAVEARPEEE
EQGQDDDSADEEDDVYDDDEPLSEEDREAIDSILDTPNTAAASLDVEVVS
WANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEI
SGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVK
LALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIM
EGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDH
LTPS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023574Ribosomal_L4_dom_sf
IPR002136Ribosomal_L4/L1e
IPR013005Ribosomal_uL4/L1e