mRNA_P-fluviatile_contig79.14271.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A6H5KTL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL0_9PHAE) HSP 1 Score: 382 bits (981), Expect = 6.040e-124 Identity = 229/350 (65.43%), Postives = 267/350 (76.29%), Query Frame = 3
Query: 54 RSVRSWGSWTSPAQGALRRGTLLQQQV-PILSTMVPSLVRFRS-SAVNSSKWEQEVLPVAPVLSGSQKMPANLKLAVEARPEEXXXXXXXXXXXXXXXXXXXX-----------EPLSEEDREAIDSILDTPNTAAAS-LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLTPS 1061
RSVR GSWT+ A + +R V P+ +T RS S++ SS+WE+E LPVAPV SGS+ +P+NLKLA EA P XXXXXXXXXX +PLSEED +AI ++LDTP AA+ L+VEVV+W++G P ++SLAPSVFGVP RRDVVHEVVRWQLARRR+GNGQTKRIGEISGSGRKVR QKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFV+L L+VALSARLREG+L VVD L+S F TS MIKT+KARG+DG VTF++ GDPQ EF RS +NIVGVKVL+ +GANV+DIIKRPNLVL+Q AV HLE+ L S
Sbjct: 37 RSVRPCGSWTAAAGASAKRQPRAIPHVGPLPTTAYMKFPLDRSMSSLKSSQWEREGLPVAPVHSGSEPLPSNLKLAAEAWPAATAGEGGNAEGXXXXXXXXXXXXXXXXXXXXTDPLSEEDHDAIAALLDTPGLAASDDLEVEVVAWSDGAPVATVSLAPSVFGVPVRRDVVHEVVRWQLARRRKGNGQTKRIGEISGSGRKVRPQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVRLGLRVALSARLREGQLKVVDDLKSDGFRTSAMIKTIKARGIDG-PVTFMVGGDPQVEFMRSVSNIVGVKVLSARGANVHDIIKRPNLVLTQDAVTHLEEFLQTS 385
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: D8LD33_ECTSI (50S ribosomal protein L4P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD33_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.680e-121 Identity = 221/305 (72.46%), Postives = 250/305 (81.97%), Query Frame = 3
Query: 162 LVRFRSSAVNSSKWEQEVLPVAPVLSGSQKMPANLKLAVEARPE----EXXXXXXXXXXXXXXXXXXXXEPLSEEDREAIDSILDTPNTAAAS-LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL-TP 1058
LVR SS + SS+WE+E LPVAPV SGS+ +P+NLKLAVEA P E XXXXXXXXXXXX PLSEED +AI ++LD P AA L+VEVV+WA+G P ++SLAPSVFGVP RRDVVHEVVRWQLARRR+GNGQTKRIGEISGSGRKVR QKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFV+L L+VALSARLREG+L VVD L+S F TS MIKT+KARG+DG VTF++ GDPQ EF RS +NI+G KVL +GANV+DIIKRPNLVL+Q AV HLE+ L TP
Sbjct: 5 LVRSMSS-LKSSQWEREGLPVAPVQSGSEPLPSNLKLAVEAWPAATAGEGGDAEEDAXXXXXXXXXXXXXPLSEEDHDAIAALLDIPGLAATDDLEVEVVAWADGAPVATVSLAPSVFGVPVRRDVVHEVVRWQLARRRKGNGQTKRIGEISGSGRKVRPQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVRLGLRVALSARLREGQLKVVDDLKSDGFKTSAMIKTIKARGIDG-PVTFVVGGDPQVEFMRSVSNIMGAKVLPARGANVHDIIKRPNLVLTQDAVTHLEEFLQTP 307
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A835ZAZ5_9STRA (Ribosomal protein L4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ5_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.430e-42 Identity = 100/216 (46.30%), Postives = 137/216 (63.43%), Query Frame = 3
Query: 417 AAASLDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPR-RRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESK-TFSTSEMIKTMKARGLDGGDVTFIMEGD-PQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLT 1055
A S V V+ G +++L P +FG RRDVVH VVRWQLA RR+G +TK I E+SGSG+K+R QKG G AR GH RPPHWRGGAKAHGP+ RD+S+KL+KK K+ L+VALSA+LRE +L VVD L + +T + ++A GL +++G P+ +T ++ GVK+L AN YDI++ LV+S+ + L + L
Sbjct: 128 AEPSFTVPVIDLVTGEEVDTVALDPFIFGHEIRRDVVHAVVRWQLACRRQGAAKTKLISEVSGSGKKMRPQKGSGQARCGHKRPPHWRGGAKAHGPKGNRDWSYKLHKKVRKMGLRVALSAKLRERKLVVVDALTTDGAAATGPTAERLRALGLLRS--ALLVDGAAPEDALAHATRHLPGVKLLWGGAANCYDILRSDRLVVSRAGLQFLTEKLA 341
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A7S2DV07_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DV07_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.530e-41 Identity = 98/197 (49.75%), Postives = 131/197 (66.50%), Query Frame = 3
Query: 477 LSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRD-FSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFI---MEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLT 1055
LSL VFG P R D++H+VVRWQLA+RRRG TK I E+SGSG+K+R QKG G ARAGHSRPPHWR GA AHGPR ++FKLNKK +L L ALS +L EGRL VVD L +++ T + + + +G + F+ + GD F+++++N+ V L G NVYDI+K ++VL+ AVA LE+ L+
Sbjct: 140 LSLDSRVFGRPLRIDILHQVVRWQLAKRRRGTAHTKNISEVSGSGKKMRPQKGTGQARAGHSRPPHWRHGAVAHGPRGETIWTFKLNKKVRRLGLLTALSQKLSEGRLHVVDSLATESLKTRALEQRLVHQGWTD-KILFVDDLLTGDSF--FRKASSNLPYVHTLPSIGLNVYDILKATDVVLTVDAVAALEERLS 333
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A1V9ZG37_9STRA (50S ribosomal protein L4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZG37_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.250e-41 Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 3
Query: 417 AAASLDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLT 1055
AA ++ +++S+ +G G+LSL SVFG P R+D++ VV+WQLA RR GN +TK E+SGS RK AQKG G AR G+ RPP WRGG +AHGP RD S+ L KK + L+VALSA+L EG+L +V L ++ T + ++++G D D F+ + F +T N+ V V+ + NVY I+ + LVLS+ V +LE+ L
Sbjct: 51 AAGNVQAKLLSFKDGAQIGTLSLNRSVFGAPIRKDILQRVVKWQLANRRSGNHKTKTRSEVSGSTRKAWAQKGSGRARVGNIRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSAKLAEGKLAIVQDLSIESEKTKAAKQLLESKGWD--DALFVDGAEAPKNFVLATRNLARVDVIREQQVNVYSILHKDVLVLSEKTVKYLEERLA 261
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A6G0XNJ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNJ9_9STRA) HSP 1 Score: 160 bits (404), Expect = 7.340e-41 Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 3
Query: 429 LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLT 1055
+ +++++A+G GSL+L+ SVFG P R+D++H VV+WQLA RR GN +TK E+SGS +KV QKG G AR G+ RPP WRGG +AHGP RD S+ L KK + L+VALS +L EG+L +V L + T M ++ +G D FI + F ST N+ V V+ K NVY I+ + LV+S+ V +LE+ L
Sbjct: 63 IQAKILTFADGAAVGSLTLSRSVFGTPVRKDLLHRVVKWQLANRRSGNHKTKTRSEVSGSTKKVWKQKGSGRARVGNRRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSTKLAEGKLAIVKDLHVEEDKTKPMKSLLETKGWD--HALFIDGDETSRNFVLSTRNLPNVDVIRQKNINVYAILHKDVLVVSEKTVKYLEERLA 269
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: RL4_RHORT (50S ribosomal protein L4 n=1 Tax=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) TaxID=269796 RepID=RL4_RHORT) HSP 1 Score: 157 bits (397), Expect = 1.100e-40 Identity = 93/203 (45.81%), Postives = 129/203 (63.55%), Query Frame = 3
Query: 444 VSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 1052
V +G +GS+ L+ SVFG+P R D++H +VRWQLARR+ G +TK I EISG+ K QKG G AR G R P +RGGA GP R + LNKK KL LK ALSA+ + G+L V+D+ S++ T +++ +K GL+ V FI + +F + NI+G+ VL +GANVYDI++R LVL++ AV HLE+ L
Sbjct: 5 VKTLDGKDAGSIELSDSVFGLPVRTDLLHRMVRWQLARRQAGTHKTKGISEISGTTAKPFKQKGTGHARQGSKRSPQFRGGATIFGPVVRSHAHDLNKKVRKLGLKTALSAKAQAGQLIVLDQAISESGKTKDLLAQLKVLGLE--KVLFIDGPEVNEKFALAARNIIGLDVLPQQGANVYDILRRDTLVLTKEAVKHLEERL 205
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A522CD43_9PROT (50S ribosomal protein L4 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A522CD43_9PROT) HSP 1 Score: 157 bits (396), Expect = 1.470e-40 Identity = 93/194 (47.94%), Postives = 122/194 (62.89%), Query Frame = 3
Query: 471 GSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHL 1052
G + L+ ++FG+ R+DV+H +V WQLA+RR GN +TK+IGEISG+G+K AQKG G AR G R P +R GA GP RD S L K KLALK ALS++ EG+L V+D ++K T EM K + A GL I++ P F R+ NI + VL KG NVYDI++R LVL++ AVA LE L
Sbjct: 14 GDIDLSDAIFGLTPRKDVLHRMVNWQLAKRRSGNHKTKQIGEISGTGKKPYAQKGTGNARQGSLRSPQFRKGAVIFGPIVRDHSHDLPKAVRKLALKTALSSKQAEGKLIVLDAAKAKDHKTKEMAKALVALGLTSA---LIIDETPDVNFTRAVRNIKNIDVLPQKGINVYDILRRDILVLTKDAVAQLEARL 204
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A1V9ZKR4_9STRA (50S ribosomal protein L4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZKR4_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.090e-39 Identity = 89/213 (41.78%), Postives = 130/213 (61.03%), Query Frame = 3
Query: 417 AAASLDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLT 1055
A ++ +V+S+ +G+ +LSL SVFG P R+D++H VV+WQLA RR GN +TK E+SGS RK AQKG G AR G+ RPP WRGG +AHGP RD S+ L KK + L+VALS ++ EG+L +V LE ++ T + ++++G D D F+ + F +T N+ V V+ NVY I+ + LV+S+ +LE+ L
Sbjct: 52 ANGNVQAKVLSFVDGSEVSTLSLNRSVFGAPLRKDILHRVVKWQLANRRSGNHKTKTRSEVSGSTRKAWAQKGSGRARVGNIRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSTKMAEGKLAIVKDLEIESEKTKAAKQLLESKGWD--DALFVDGSEAPKNFVLATRNLPRVDVIRDHQVNVYSILHKDILVISEKTAKYLEERLA 262
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Match: A0A485KYQ5_9STRA (Aste57867_13666 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYQ5_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.840e-39 Identity = 90/209 (43.06%), Postives = 128/209 (61.24%), Query Frame = 3
Query: 429 LDVEVVSWANGTPSGSLSLAPSVFGVPTRRDVVHEVVRWQLARRRRGNGQTKRIGEISGSGRKVRAQKGGGVARAGHSRPPHWRGGAKAHGPRRRDFSFKLNKKFVKLALKVALSARLREGRLTVVDRLESKTFSTSEMIKTMKARGLDGGDVTFIMEGDPQPEFKRSTTNIVGVKVLAVKGANVYDIIKRPNLVLSQGAVAHLEDHLT 1055
+ +V+S+ +G GSL+L+ SVFG P R+D++ VV+WQLA RR GN +TK E+SGS +K QKG G AR G+ RPP WRGG +AHGP RD S+ L KK + L+VALSA+L EG+L +V L+ ++ T M + + +G D FI + F ST N+ V V+ + +VY I+ + LVLS+ V +LE+ L
Sbjct: 67 IQAKVLSFNDGASVGSLTLSRSVFGAPIRKDILQRVVKWQLANRRSGNHKTKTRSEVSGSTKKAWKQKGSGRARVGNIRPPQWRGGYRAHGPVVRDHSYSLPKKVRAMGLRVALSAKLAEGKLAIVQDLDVESEKTKAMKELLATKGWD--HALFIDGEEASRNFVLSTRNLPHVDVIRQRNISVYSILHKDVLVLSEKTVKYLEERLA 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig79.14271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig79.14271.1 >prot_P-fluviatile_contig79.14271.1 ID=prot_P-fluviatile_contig79.14271.1|Name=mRNA_P-fluviatile_contig79.14271.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=305bp MVPSLVRFRSSAVNSSKWEQEVLPVAPVLSGSQKMPANLKLAVEARPEEEback to top mRNA from alignment at P-fluviatile_contig79:339201..346582- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig79.14271.1 ID=mRNA_P-fluviatile_contig79.14271.1|Name=mRNA_P-fluviatile_contig79.14271.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7382bp|location=Sequence derived from alignment at P-fluviatile_contig79:339201..346582- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig79:339201..346582- >mRNA_P-fluviatile_contig79.14271.1 ID=mRNA_P-fluviatile_contig79.14271.1|Name=mRNA_P-fluviatile_contig79.14271.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1830bp|location=Sequence derived from alignment at P-fluviatile_contig79:339201..346582- (Porterinema fluviatile SAG_2381)back to top |