prot_P-fluviatile_contig79.14266.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig79.14266.1
Unique Nameprot_P-fluviatile_contig79.14266.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length443
Homology
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BLAST of mRNA_P-fluviatile_contig79.14266.1 vs. uniprot
Match: D8LD29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD29_ECTSI)

HSP 1 Score: 498 bits (1281), Expect = 8.270e-172
Identity = 315/441 (71.43%), Postives = 351/441 (79.59%), Query Frame = 0 
Query:    1 MARRHRHRNLFAVAVLVAFLCPGKVRGHGAATGGGMGMASPGDEARRIKEQATALHKAGEYEEAAREFSRAAELLEAAGGALAPPPALSAIRLSLAAAQLKCGDLRGAEATCSQLLRTPGLPRPLRQKASYRRGVSRKRQAEAAGAGVVGARLAHKAYRDAYLSVELSQVLGA-GPAAGDVKAVELMAEMECGDWGHGWLTEADRLAARSKADRHLTSLASLTLPEREVSPGGGGMGIFDMLGAGASASGGXXXXXXXXXXXXXXXXXXXPGLMNMMGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXGGGPEPEQMFKMAKKMSKAVKKQLRNPGTQQLVCSFLKQAQPDTLMSLAKAAGFPNANEALVGKVSDYLQKADGKTLESWIDYGEIASGVYRRLSQLAVLWSRGVAIAGVWLVWVWIRACFAPIVVQQA 440
            M RR+RHR +                      GGG+ MASPGD+ARRIKE+ATALH+AG+YEEAA EF+RAA+LLE AG  LAPPPALSAIRLSLAA+QLK GDLRGAEATCSQLL+TPGLPRPLRQKASYRRG+SRKRQAEAAGAG  G+RLA +AYRDAYLSVELS   GA GPAAGD KA+ LMAEME GDWG GWLTEADR AARSKAD+HLT+LAS+  P R    G GG  +FDM G G      XXXXXX XXXXXXXX XXXPGLM+MMGAG  XXXXXXXXXXXXXXXX   XXX          GP+P+QM KMAKKMSK VKKQLRNPGTQQ+VC+FL QA+P+TLMSLA  AGFP ANEA+V  +S YLQKADGKTLESWIDYGEIA+  +RRL Q +VLWSRG+A+AG+WLVWVW+RACFAPIVVQ+A
Sbjct:    1 MVRRYRHRTVVXXXXXXXXXXXXXXXXXXXXFGGGVAMASPGDQARRIKEEATALHRAGQYEEAAEEFARAAQLLEEAGVGLAPPPALSAIRLSLAASQLKSGDLRGAEATCSQLLKTPGLPRPLRQKASYRRGMSRKRQAEAAGAGAAGSRLAQRAYRDAYLSVELSNDGGAAGPAAGDAKALGLMAEMEAGDWGQGWLTEADRSAARSKADKHLTALASMAPPARSTPAGSGG--LFDMFGGGXXXXX-XXXXXXGXXXXXXXXLXXXPGLMDMMGAGTGXXXXXXXXXXXXXXXXLMGXXXAKSGLGGGADGPDPKQMLKMAKKMSKGVKKQLRNPGTQQMVCAFLNQAKPETLMSLATTAGFPGANEAIVNGLSGYLQKADGKTLESWIDYGEIATCAFRRLKQFSVLWSRGIALAGIWLVWVWVRACFAPIVVQKA 438
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig79.14266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD29_ECTSI8.270e-17271.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 38..168
e-value: 1.4E-10
score: 43.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 44..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 429..442
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 409..428
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.784

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig79contigP-fluviatile_contig79:282924..291571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig79.14266.1mRNA_P-fluviatile_contig79.14266.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig79 282684..291571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig79.14266.1 ID=prot_P-fluviatile_contig79.14266.1|Name=mRNA_P-fluviatile_contig79.14266.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=443bp
MARRHRHRNLFAVAVLVAFLCPGKVRGHGAATGGGMGMASPGDEARRIKE
QATALHKAGEYEEAAREFSRAAELLEAAGGALAPPPALSAIRLSLAAAQL
KCGDLRGAEATCSQLLRTPGLPRPLRQKASYRRGVSRKRQAEAAGAGVVG
ARLAHKAYRDAYLSVELSQVLGAGPAAGDVKAVELMAEMECGDWGHGWLT
EADRLAARSKADRHLTSLASLTLPEREVSPGGGGMGIFDMLGAGASASGG
AGAPGLAGMGGGAGASGGMPGLMNMMGAGMGGGGGAEGMGGLMSMLMGGA
AGANGGVGGSGGGGPEPEQMFKMAKKMSKAVKKQLRNPGTQQLVCSFLKQ
AQPDTLMSLAKAAGFPNANEALVGKVSDYLQKADGKTLESWIDYGEIASG
VYRRLSQLAVLWSRGVAIAGVWLVWVWIRACFAPIVVQQAVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf