mRNA_P-fluviatile_contig79.14266.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig79.14266.1 vs. uniprot
Match: D8LD29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD29_ECTSI) HSP 1 Score: 499 bits (1284), Expect = 5.330e-171 Identity = 315/441 (71.43%), Postives = 351/441 (79.59%), Query Frame = 1
Query: 1 MARRHRHRNLFAVAVLVAFLCPGKVRGHGAATGGGMGMASPGDEARRIKEQATALHKAGEYEEAAREFSRAAELLEAAGGALAPPPALSAIRLSLAAAQLKCGDLRGAEATCSQLLRTPGLPRPLRQKASYRRGVSRKRQAEAAGAGVVGARLAHKAYRDAYLSVELSQVLGA-GPAAGDVKAVELMAEMECGDWGHGWLTEADRLAARSKADRHLTSLASLTLPEREVSPGGGGMGIFDMLGAGASASGGXXXXXXXXXXXXXXXXXXXPGLMNMMGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXGGGPEPEQMFKMAKKMSKAVKKQLRNPGTQQLVCSFLKQAQPDTLMSLAKAAGFPNANEALVGKVSDYLQKADGKTLESWIDYGEIASGVYRRLSQLAVLWSRGVAIAGVWLVWVWIRACFAPIVVQQA 1320
M RR+RHR + GGG+ MASPGD+ARRIKE+ATALH+AG+YEEAA EF+RAA+LLE AG LAPPPALSAIRLSLAA+QLK GDLRGAEATCSQLL+TPGLPRPLRQKASYRRG+SRKRQAEAAGAG G+RLA +AYRDAYLSVELS GA GPAAGD KA+ LMAEME GDWG GWLTEADR AARSKAD+HLT+LAS+ P R G GG +FDM G G XXXXXX XXXXXXXX XXXPGLM+MMGAG XXXXXXXXXXXXXXXX XXX GP+P+QM KMAKKMSK VKKQLRNPGTQQ+VC+FL QA+P+TLMSLA AGFP ANEA+V +S YLQKADGKTLESWIDYGEIA+ +RRL Q +VLWSRG+A+AG+WLVWVW+RACFAPIVVQ+A
Sbjct: 1 MVRRYRHRTVVXXXXXXXXXXXXXXXXXXXXFGGGVAMASPGDQARRIKEEATALHRAGQYEEAAEEFARAAQLLEEAGVGLAPPPALSAIRLSLAASQLKSGDLRGAEATCSQLLKTPGLPRPLRQKASYRRGMSRKRQAEAAGAGAAGSRLAQRAYRDAYLSVELSNDGGAAGPAAGDAKALGLMAEMEAGDWGQGWLTEADRSAARSKADKHLTALASMAPPARSTPAGSGG--LFDMFGGGXXXXX-XXXXXXGXXXXXXXXLXXXPGLMDMMGAGTGXXXXXXXXXXXXXXXXLMGXXXAKSGLGGGADGPDPKQMLKMAKKMSKGVKKQLRNPGTQQMVCAFLNQAKPETLMSLATTAGFPGANEAIVNGLSGYLQKADGKTLESWIDYGEIATCAFRRLKQFSVLWSRGIALAGIWLVWVWVRACFAPIVVQKA 438 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig79.14266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig79.14266.1 >prot_P-fluviatile_contig79.14266.1 ID=prot_P-fluviatile_contig79.14266.1|Name=mRNA_P-fluviatile_contig79.14266.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=443bp MARRHRHRNLFAVAVLVAFLCPGKVRGHGAATGGGMGMASPGDEARRIKEback to top mRNA from alignment at P-fluviatile_contig79:282684..291571- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig79.14266.1 ID=mRNA_P-fluviatile_contig79.14266.1|Name=mRNA_P-fluviatile_contig79.14266.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8888bp|location=Sequence derived from alignment at P-fluviatile_contig79:282684..291571- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig79:282684..291571- >mRNA_P-fluviatile_contig79.14266.1 ID=mRNA_P-fluviatile_contig79.14266.1|Name=mRNA_P-fluviatile_contig79.14266.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2658bp|location=Sequence derived from alignment at P-fluviatile_contig79:282684..291571- (Porterinema fluviatile SAG_2381)back to top |