prot_P-fluviatile_contig79.14256.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig79.14256.1
Unique Name	prot_P-fluviatile_contig79.14256.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	285

Homology

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BLAST of mRNA_P-fluviatile_contig79.14256.1 vs. uniprot
Match: D8LD38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD38_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 4.350e-59
Identity = 122/276 (44.20%), Postives = 151/276 (54.71%), Query Frame = 0

Query:   14 RYCVLLG---FCFAGGLAFAVGAA----LGNVDLDTTLPLSTAAFWQFAHSQDFYRNTRQQTSTVRQEVVELSNWVQADDPGTEVPPASATPRGPPRPQPGRVLLGRSSSPPSSSLDRQQQEHEQLEPRLWRRRARLTYAISSPFGSSDATVVQEHTLLEQPHEADDGGGRCTGGGGTGDGRGVMICYSESDCITGFPMVPGNLSVKTTFLVTPAEDGD-PKRVRVRVGVVVDDIELPRRLQFLSKRVSKMIGNGGIKQAEGWLAEMIKAGSLMAE 281
             + VLLG      A G++ A  AA    +G + LDTTLP+  A FW+FAHS+DFYR+TRQQ++ VRQ+VV+L++W QAD                                                                        +  EHTLL+  H+         GGGG G      ICY+ESDCITGFPMVPG+LSVKTTFLVTP EDG   +RVRVRVGVVV++IELP+RL+FLSKRVSK++GNGG KQAE WL EM+K GS  A+
Sbjct:   13 HFGVLLGGATLLLAVGISDAFAAAGPSTVGTIGLDTTLPMDAATFWRFAHSKDFYRSTRQQSAVVRQQVVDLTSWEQADG-----------------------------------------------------------------------IDAEHTLLDDRHQK--------GGGGGG------ICYTESDCITGFPMVPGDLSVKTTFLVTPVEDGGHEERVRVRVGVVVEEIELPKRLRFLSKRVSKIVGNGGRKQAEKWLGEMVKEGSPAAD 203

[Close]

BLAST of mRNA_P-fluviatile_contig79.14256.1 vs. uniprot
Match: A0A6H5K1L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1L1_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.020e-46
Identity = 88/147 (59.86%), Postives = 105/147 (71.43%), Query Frame = 0

Query:  136 LWRRRARLTYAISSPFGSSDATVVQEHTLLEQPHEADDGGGRCTGGGGTGDGRGVMICYSESDCITGFPMVPGNLSVKTTFLVTPAEDGD-PKRVRVRVGVVVDDIELPRRLQFLSKRVSKMIGNGGIKQAEGWLAEMIKAGSLMAE 281
            L +RRA L YAI+SPF SSDA VVQEHTLL+  H+   GGG               ICY+E DCITGFPMVPG+LSVK TFLVT  +DG   +RV VRV VVV + ELP+RL+FLSKRVS ++G+GG KQAE WL EM+K GS +A+
Sbjct:   63 LLQRRATLNYAITSPFDSSDAKVVQEHTLLDDRHQEGGGGG---------------ICYTERDCITGFPMVPGDLSVKPTFLVTRVDDGGHTERVHVRVEVVVKETELPKRLRFLSKRVSDIVGDGGRKQAEKWLGEMVKEGSPVAD 194

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig79.14256.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig79.14256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LD38_ECTSI	4.350e-59	44.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K1L1_9PHAE	1.020e-46	59.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..35
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 36..284
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig79	contig	P-fluviatile_contig79:173622..177514 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig79.14256.1	mRNA_P-fluviatile_contig79.14256.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig79 173565..178888 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig79.14256.1 ID=prot_P-fluviatile_contig79.14256.1|Name=mRNA_P-fluviatile_contig79.14256.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=285bp
MRSEQIATAGLMIRYCVLLGFCFAGGLAFAVGAALGNVDLDTTLPLSTAA
FWQFAHSQDFYRNTRQQTSTVRQEVVELSNWVQADDPGTEVPPASATPRG
PPRPQPGRVLLGRSSSPPSSSLDRQQQEHEQLEPRLWRRRARLTYAISSP
FGSSDATVVQEHTLLEQPHEADDGGGRCTGGGGTGDGRGVMICYSESDCI
TGFPMVPGNLSVKTTFLVTPAEDGDPKRVRVRVGVVVDDIELPRRLQFLS
KRVSKMIGNGGIKQAEGWLAEMIKAGSLMAETTA*