prot_P-fluviatile_contig77.14167.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig77.14167.1
Unique Nameprot_P-fluviatile_contig77.14167.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length532
Homology
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: D7FHY7_ECTSI (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY7_ECTSI)

HSP 1 Score: 827 bits (2135), Expect = 1.220e-298
Identity = 438/523 (83.75%), Postives = 474/523 (90.63%), Query Frame = 0
Query:   17 VMLSSSAMSLNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPA--SGGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPLGGEXXXXXXXXXXXXXXXX------RKKLVVIAPAIVDSLNAAIVQNSWTSAF 531
            ++ S++ MSLNVF+YLE+LPPDALD LYG    +A GQ  RSHGQWTCRALLQSLPQLAKQ+VMRLLFVEG V K MLKSWVKKEYQRVHAAS+RKLVSLRVLL +  GQEY+LNP FRENLQR+LCA DKTPWQGDVPL+ADRSPP+VAKIER MHSQWQDVLYFLVGSDEEGRS PPARV+KFMEESGLMRPVRG GALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRD+LLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFV+LGLLFKRKAKSTRFYPTSIAVNLIFGS+P+  +GG      QR+PQPA       + +DTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKAL+TGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEH++GVL+DVSYASR+AFRG+ +FAN  QGLLWSSPLGGE XXXXXXXXXXXXXXX      RKKL+V++P IV+SLNAAIV+N WTS+F
Sbjct:   12 LLASATTMSLNVFDYLERLPPDALDKLYGAAPPAADGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSAGGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGRGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAXXXXTQRKPQPAXXXXXXKREDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALSTGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHRDGVLVDVSYASRDAFRGMTEFANAKQGLLWSSPLGGEDXXXXXXXXXXXXXXXXXXLAGRKKLMVVSPGIVESLNAAIVENGWTSSF 534          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A6H5KJZ4_9PHAE (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ4_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 1.430e-185
Identity = 278/372 (74.73%), Postives = 299/372 (80.38%), Query Frame = 0
Query:   17 VMLSSSAMSLNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGGALRITDKG------------------------------------------------YEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPA--SGGGDGGVGQRQPQPAG 338
            ++ S++ MSLNVF+YLE+LPPDALD LYG    +A GQ  RSHGQWTCRALLQSLPQLAKQ+VMRLLFVEG V K MLKSWVKKEYQRVHAAS+RKLVSLRVLL + DGQEY+LNP FRENLQR+LCA DKTPWQGDVPL+ADRSPP+VAKIER MHSQWQDVLYFLVGSDEEGRS PPARV+KFMEESGLMRPVRGGGALRITDKG                                                YEFMLKEAHVQAWMVVHALINGYGRTQPGCRD+LLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFV+LGLLFKRKAKSTRFYPTSIAVNLIFGS+P+  +GG  GG  QR+PQPAG
Sbjct:   12 LLASTTTMSLNVFDYLERLPPDALDKLYGAAPPAAQGQGGRSHGQWTCRALLQSLPQLAKQHVMRLLFVEGPVGKGMLKSWVKKEYQRVHAASVRKLVSLRVLLPSADGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGGGALRITDKGQEEAWNCSRGARGGSFLCLRGGVGRGGARVLSTSSMLEGAVYPRRTGLYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAGGGGAQRKPQPAG 383          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A836C856_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C856_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.680e-103
Identity = 199/461 (43.17%), Postives = 265/461 (57.48%), Query Frame = 0
Query:   86 EGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKD-------GQEYR-----LNPHFRENLQRSLCAPDKTPWQGD--VPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYC------------------------------------------KVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQPQPAGAPLGGNKGEDTSIH--------IIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSS 482
            +G++ K +LK WV+  Y  VH A++R+L +LRVL+  ++        Q+ R     LNP FR+NL ++L  PD  PW+ D    L  D+  PS AKIE  M  +W+ VL+FLV SD  G    P+ V  FM+++GLM        L IT++GYEFML++ HVQAWM V +LI     +    RDDLL+FLF LSYC                                          KV + YPL ALT  Q  LA+DF+DLGLL++RK  S RFY T IAVNL+FG+A A              P+ A +   +  D S          IIVETNFQV+AYT S LH AML+LFLELRA LPN ++G ITRES+R+AL TGIK  Q+L+FLKWHAHP V  R P++PENIADQ++LWERER R+++  G L+D+ +     F  + ++A  +   LW++
Sbjct:   22 DGAISKDLLKGWVRDAYTGVHRAAVRQLSALRVLVRAQELSGAAAAAQQQRRGMIALNPPFRKNLLQALLTPDVAPWKDDPRFALRPDKLTPSRAKIEGEMRRKWEAVLHFLVASDGAGAGPTPS-VRAFMQQAGLMARRGRSEQLVITNRGYEFMLRDIHVQAWMFVLSLIRSKS-SDAQARDDLLSFLFMLSYCTVSAALQPLEGHHNAQSVCAAPSLSCKPLPAAPSASVNRCSEKVCEDYPLLALTPAQAQLARDFIDLGLLYQRKPSSQRFYTTEIAVNLVFGAAAAE------------HPSRAVI---QAADASAQLDLAPRMTIIVETNFQVVAYTTSDLHVAMLTLFLELRARLPNMVIGVITRESVRQALVTGIKASQILNFLKWHAHPNVINRRPMIPENIADQIILWERERTRVKYDAGTLLDLPFEGVHDFDKVAEYAEELGACLWAA 465          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A024TBA0_9STRA (General transcription factor IIH subunit 4 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBA0_9STRA)

HSP 1 Score: 315 bits (806), Expect = 2.280e-98
Identity = 195/476 (40.97%), Postives = 276/476 (57.98%), Query Frame = 0
Query:   26 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVE-GSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQ------------------PQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 480
            +N FE+L  LP  ++D LY  Q A            W C+A+ QSL  LA+Q VMRLLF    +     +  WV+   Q    A+I KL  LRVL   +   +Y LNP F+E L+++L +   +PW+ G   L A++  P+V ++E +   +W  VL+F+VGS     + PPA V+  +E + LM+P +    AL ITD GYEFMLK+ H Q W+ V   +    R      D++L FLFQ+SYC++ + Y +  LT+ Q+ L  D V+LGLL++R AK+TRFY TS+AVNLIFG         G +GQ +                  P  +  P       D+S+ I+VETNF+V AYT+S LH AMLS+F+++ A LPN  VG +TRES+R AL+ GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++ + G L+DV+    E F  ++  A  M  LLW
Sbjct:    1 MNAFEFLGSLPGGSVDRLY--QDA------------WACQAVFQSLSPLAQQIVMRLLFSNHATYAHDAILHWVQDAAQDKMTAAIEKLRHLRVLRVVQGSLDYVLNPVFQEQLKKALSSLGGSPWEAGRSKLPAEKPIPAV-ELELYARKRWDSVLHFMVGSTAV--AAPPATVIGILEHTKLMQPSKSDSRALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILPADEMLQFLFQMSYCRMNEYYAVADLTRNQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFG---------GMLGQTRANMTMSQGLDHITNYAADPSKSRLPSASPARADSSLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQLYLWQRERNRIKFEPGELVDVA---NEDFDAVVKHAEDMGVLLW 447          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: W4FDT1_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDT1_9STRA)

HSP 1 Score: 312 bits (799), Expect = 2.460e-97
Identity = 190/478 (39.75%), Postives = 271/478 (56.69%), Query Frame = 0
Query:   26 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFV-EGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQ---------------------PQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 480
            +N FE+L  LP  ++D LY  Q A            W C+A+ QS+  LA+Q VMRLLF  +GS     +  WV+   Q    A+I KL  LRVL       EY LNP F++ L+++L +   +PW+          P + A++E++   +W  VL+F+VGS     + PP  V+  +E +GLM+P +    AL ITD GYEFMLK+ H Q W+ V   +    R      +++L FLFQ+SYC++ + Y +  LT+ Q+ L  D V+LGLL++R AK+TRFY TS+AVNLIFG         G +GQ +                     P P  A        D  + I+VETNF+V AYT+S LH AMLS+F+++ A LPN  VG +TRES+R AL+ GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++   G L+D  + + E F  ++ FA  +  +LW
Sbjct:    1 MNAFEFLGSLPGGSVDRLY--QDA------------WACQAVFQSMSPLAQQIVMRLLFTNQGSYSHDAILQWVQDPAQVKMTAAIEKLRHLRVLRMAHGTAEYVLNPVFQDQLKKALSSLGGSPWEAGRHKLPSEKPIAAAELEQYARKRWDAVLHFMVGSTAV--AAPPPTVIGILEHTGLMQPSKTDARALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILSAEEMLQFLFQMSYCRMNEYYAVADLTRHQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFG---------GMLGQTRSSITMSQGLDHLHRPSKSPHLPPPTAAAA------DAHLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQLYLWQRERNRIKFDAGELVD-GFVTTEDFDVVLKFAQDVGVMLW 446          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A0P1AW06_PLAHL (General transcription factor IIH subunit 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW06_PLAHL)

HSP 1 Score: 310 bits (794), Expect = 2.190e-96
Identity = 189/479 (39.46%), Postives = 271/479 (56.58%), Query Frame = 0
Query:   26 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWV------KKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTADRSPPSVAK-IERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPAS-----------GGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPL 484
            ++ FE+LE LP   L+ LY                 W C+A+ Q+LP LA+Q+VMRLL    SV + +L+ WV        E      A++ KL  LRV +    G  YR +P F++ L  +L     +PW+ G + L  D      AK +ER+  ++W  VL+++VGS       PP  V+  +  + L++       AL ITD GYEFMLK+ HVQ W  +   I     T    ++D+L FLFQLSYC+ G  Y +  LTQTQ+ L  DF+D GLLF++++ S RFY TS+AVNLIFG +               G   GV  +   P   P+      +  + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +R+ TP+VPENIADQ+ LWERER+R++  EG+L D  + ++E +  + D+A  +  L W+ P+
Sbjct:    1 MDAFEFLETLPAATLERLY--------------QDPWACQAVFQALPPLAQQFVMRLLPTNTSVPRDLLEKWVVPLPGDSHEMPPQFNAALHKLDGLRVFIQENGG--YRPHPLFQKQLMYALSNLGGSPWERGRLRLPKDPENTFAAKDLERYARARWDSVLHYMVGSTAVQE--PPQSVVDILLRTKLLQSSEADSRALHITDTGYEFMLKDIHVQMWTFMLEYIRTLDNTGTLKQEDILQFLFQLSYCQTGGYYAVADLTQTQQLLLGDFIDFGLLFRKRSNSDRFYTTSLAVNLIFGGSKGQERSHVRLTSSFAGVRAGVKSQVTNPRLTPV---LDHEAQLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLVKHAHPKMRQNTPIVPENIADQIYLWERERNRVQFIEGILFD-GFNTKEDYESVCDYARNLDVLTWADPI 457          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A6G0N8J6_9STRA (General transcription factor IIH subunit 4 n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0N8J6_9STRA)

HSP 1 Score: 315 bits (807), Expect = 2.040e-95
Identity = 191/483 (39.54%), Postives = 283/483 (58.59%), Query Frame = 0
Query:   23 AMSLNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEY-------QRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTAD-RSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPAS-----------GGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPL 484
            +++++ F++LE LPP  L+ LY                 W C+A+ Q+LP LA+Q+VMRLL     V +S+L+ WV  E         + HAA + KL  L+V +  +DG  YR +P F++ L  +L     +PW+ G + L  D  +  + A +ER+  ++W  VL+++VGS       PP  V+  +  + L++       AL ITD GYEFMLK+ HVQ W+ +   I     T    ++D+L FLFQ+SYC+ G+ Y +  LT+TQR L  DF+D GLLF+++  S RFY TS+AVNLIFG +               G   G+  +   P  AP   +  +   + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +RR TPV+PENIADQ+ LWERER+R++  EG+L D  + ++E +  + D+A  ++ L WS P+
Sbjct:  260 SLTMDAFDFLETLPPATLERLY--------------QDPWACQAIFQALPPLAQQFVMRLLPSNAGVPRSLLEQWVVPEPGDAKPMPPQFHAA-LHKLEGLKVFVH-QDGA-YRSHPTFQKQLMYALSNLGGSPWERGRLQLPKDPENTFAAADLERYARARWDSVLHYMVGSTAVQE--PPQSVVDILLRTKLLQASGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGEYYAVADLTETQRLLLGDFIDFGLLFRKRPNSDRFYTTSLAVNLIFGGSTGQKRSHVSLTSSFAGVRAGLKSQVADPRHAPTADHGAQ---LLVVVETNFKIYAYTTSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNTPVIPENIADQIYLWERERNRVQFMEGILFD-GFNTKEDYESVRDYAEDLKVLTWSDPI 719          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A6G0WGX7_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGX7_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.140e-95
Identity = 185/472 (39.19%), Postives = 261/472 (55.30%), Query Frame = 0
Query:   26 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQP------------QPAGAPLGGNKGEDTS----IHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 480
            +N FEYL  LP  +LD LY                 W C+A+ QS+  L++Q VMRLLF    V K  L  W++   Q    A+I KL  LRVL   +   ++ LNP F+E L+ +L +   +PW+          P + A +E++   +W  VL+F+VGS       PP  V+  +E + LM+P      AL ITD GYEFMLK+ H Q W+ V   I    R      D++L F FQ+SYC++ + Y +  LT+ Q+ L  D V LGLL+++ +K+TRFY TS+AVNLIFG         G  GQ +             Q A + +       TS    + I+VETNF+V AYT S LH AMLS+F+++ A LPN  VG +TRES+R AL  GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++   G L+D  + + E F  ++ +A  +  L+W
Sbjct:    1 MNAFEYLGALPGTSLDRLY--------------QDPWACQAVFQSMNPLSQQIVMRLLFTTTHVSKDALMHWIQDSAQSKMTAAIEKLCHLRVLRPVQGTNKFGLNPAFQEKLKTALSSLGGSPWEAGRKNLPPEKPIAAADLEQYARKRWDAVLHFMVGSTAV--PAPPKEVIGILEHTRLMKPSETDARALHITDTGYEFMLKDIHAQTWIFVLNYIKDIDRKGILSADEMLQFFFQMSYCRMNEYYAVADLTRHQQQLLGDLVQLGLLYRKDSKATRFYTTSLAVNLIFG---------GMAGQTRTNITMVQSLEAVHQQASSQVVPRPFASTSSASHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQLYLWQRERNRIKFDAGELLD-GFVTTEDFDSVVKYAQDLHVLMW 446          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: A0A485KU14_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU14_9STRA)

HSP 1 Score: 306 bits (785), Expect = 3.190e-95
Identity = 189/476 (39.71%), Postives = 268/476 (56.30%), Query Frame = 0
Query:   26 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFV-EGSVEKSMLKSWVKKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQPQ------------PAGAPLGGNKGE-------DTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLW 480
            +N FE+L  LP  ++D LY  Q A            W C+A+ QS+  L +Q VMRLLF  + S  +  L  WV++  Q+    +I KL  LRVL   K  +E+ LNP F+E L+++L +   +PW+      A   P S   +E++   +W  VL+F+VGS       PP  V+  +E + LM+P      AL ITD GYEFMLK+ H Q W+ V   I    R      +++L FLFQ+SYC++ + Y +G LT+ Q+ L  D V+LGLLF++  K+TRFY TS+AVNLIFG           +GQ +               +G  L   KG           + I+VETNF+V AYT S LH AMLS+F+++ A LPN  VG +TRES+R AL  GI   Q+ DFL  HAHP +   +PV+PENIADQ+ LW+RER+R++   G L+D  + + E F  ++++A  +  LLW
Sbjct:    1 MNAFEFLATLPAASVDRLY--QDA------------WACQAVFQSMEPLGQQIVMRLLFTSQVSYSQESLLEWVQEPAQQKMIHAIEKLSHLRVLRVVKGQREFVLNPVFQEQLKKALSSLGGSPWEAGRQKLAAEPPISALDLEQYARKRWDAVLHFMVGSTAV--PAPPPTVIGILEHTRLMQPSSSDARALHITDTGYEFMLKDVHAQTWIFVLEYIKDIDRRGILSAEEMLQFLFQMSYCRMNEYYAIGDLTRNQQQLLGDLVELGLLFRKGTKATRFYTTSLAVNLIFGGV---------LGQTRTSISMVQSLEQVHSASGQQL--TKGAVPRPVAVAAHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQLYLWQRERNRIKFDAGELLD-GFVTTEDFDTVVNYAQDLDVLLW 448          
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Match: D0NRC9_PHYIT (General transcription factor IIH subunit 4 n=21 Tax=Phytophthora TaxID=4783 RepID=D0NRC9_PHYIT)

HSP 1 Score: 306 bits (783), Expect = 8.500e-95
Identity = 186/479 (38.83%), Postives = 271/479 (56.58%), Query Frame = 0
Query:   26 LNVFEYLEKLPPDALDNLYGKQQASAAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWV------KKEYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPWQ-GDVPLTADRSPPSVA-KIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSAPAS-----------GGGDGGVGQRQPQPAGAPLGGNKGEDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQEGVLMDVSYASREAFRGIIDFANTMQGLLWSSPL 484
            ++ F++LE LPP  L+ LY                 W C+A+ Q+LP LA+Q+VMRLL    +V + +L+ WV       K       A+++KL  LRV +    G  Y+ +P F++ L  +L     +PW+ G + L  D      A  +ER+  ++W  VL+++VGS       PP  V+  +  + L++       AL ITD GYEFMLK+ HVQ W+ +   I     T    ++D+L FLFQ+SYC+ G  Y +  LT+TQR L  DF+D GLLF+++  S RFY TS+AVNLIFG +               G   G+  +   P  AP          + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +RR +PV+PENIADQ+ LWERER+R++  EG+L D  + ++E +  + D+A  +  L WS P+
Sbjct:    1 MDAFDFLETLPPATLERLY--------------QDPWACQAIFQALPSLAQQFVMRLLPTNSAVPRDLLEQWVVPIPGETKRMPPQFNAALQKLEGLRVFVQQDGG--YKPHPTFQKQLMYALSNLGGSPWERGRLHLPRDPENTFAAVDLERYARARWDLVLHYMVGSTAVQE--PPQSVVDILLRTKLLQASGADSRALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGGYYAVADLTETQRLLLGDFIDFGLLFRKRQNSDRFYTTSLAVNLIFGGSTGQKRSHVSLTSSFAGVRAGMKSQVADPRQAPT---VDHGARLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNSPVIPENIADQIYLWERERNRVQFLEGILFD-GFNTKEDYESVRDYAKGLMVLTWSDPI 457          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHY7_ECTSI1.220e-29883.75General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6H5KJZ4_9PHAE1.430e-18574.73General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A836C856_9STRA1.680e-10343.17General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A024TBA0_9STRA2.280e-9840.97General transcription factor IIH subunit 4 n=2 Tax... [more]
W4FDT1_9STRA2.460e-9739.75General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A0P1AW06_PLAHL2.190e-9639.46General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6G0N8J6_9STRA2.040e-9539.54General transcription factor IIH subunit 4 n=3 Tax... [more]
A0A6G0WGX7_9STRA2.140e-9539.19General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A485KU14_9STRA3.190e-9539.71General transcription factor IIH subunit 4 n=1 Tax... [more]
D0NRC9_PHYIT8.500e-9538.83General transcription factor IIH subunit 4 n=21 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004598Transcription factor TFIIH subunit p52/Tfb2PFAMPF03849Tfb2coord: 30..420
e-value: 3.7E-104
score: 348.5
IPR004598Transcription factor TFIIH subunit p52/Tfb2PANTHERPTHR13152TFIIH, POLYPEPTIDE 4coord: 23..482
NoneNo IPR availableGENE3D3.30.70.2610coord: 430..485
e-value: 7.9E-10
score: 40.8
IPR040662Transcription factor Tfb2, C-terminal domainPFAMPF18307Tfb2_Ccoord: 435..483
e-value: 9.6E-10
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig77contigP-fluviatile_contig77:394164..400576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig77.14167.1mRNA_P-fluviatile_contig77.14167.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig77 393388..400604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig77.14167.1 ID=prot_P-fluviatile_contig77.14167.1|Name=mRNA_P-fluviatile_contig77.14167.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=532bp
MDSHGSSSQSATAENSVMLSSSAMSLNVFEYLEKLPPDALDNLYGKQQAS
AAGQSARSHGQWTCRALLQSLPQLAKQYVMRLLFVEGSVEKSMLKSWVKK
EYQRVHAASIRKLVSLRVLLTTKDGQEYRLNPHFRENLQRSLCAPDKTPW
QGDVPLTADRSPPSVAKIERHMHSQWQDVLYFLVGSDEEGRSIPPARVMK
FMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQ
PGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKA
KSTRFYPTSIAVNLIFGSAPASGGGDGGVGQRQPQPAGAPLGGNKGEDTS
IHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKA
LATGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQVLLWERERDRMEHQ
EGVLMDVSYASREAFRGIIDFANTMQGLLWSSPLGGEEEEEEEDSDGGGR
LAGRKKLVVIAPAIVDSLNAAIVQNSWTSAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004598TFIIH_p52/Tfb2
IPR040662Tfb2_C